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Series GSE104464 Query DataSets for GSE104464
Status Public on Jan 20, 2018
Title Next Generation Sequencing Facilitates Quantitative Analysis of ChIP-sequence of U2OS cells expressing FANCD2-3x FLAG under mild replication stress by low dose aphidicolin (APH)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome-wide distribution of FANCD2 protein in chromatin under replication stress.
 
Overall design Examination of APH treat and non-treat samples with anti-FLAG Ab-ChIP, in the presence of normal-IgG ChIP and input cotrol
 
Contributor(s) Okamoto Y, Kugou K, Iwasaki WM, Ishiai M, Ohki C, Innan H, Takata M, Ohta K
Citation(s) 29394375
Submission date Oct 01, 2017
Last update date May 15, 2019
Contact name Masamichi Ishiai
E-mail(s) mishiai@house.rbc.kyoto-u.ac.jp
Phone +81-75-753-7561
Organization name Kyoto University
Department Radiation Biology Center
Lab Late Effects Studies
Street address Yoshidakonoe-cho, Sakyo-ku
City Kyoto
State/province Kyoto
ZIP/Postal code 606-8501
Country Japan
 
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (6)
GSM2800823 DMSO/normal IgG-IP
GSM2800824 APH/normal IgG-IP
GSM2800825 DMSO/FLAG Ab-IP
Relations
BioProject PRJNA412775
SRA SRP119206

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104464_RAW.tar 1.9 Gb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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