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Series GSE104368 Query DataSets for GSE104368
Status Public on Jul 20, 2018
Title Genome-wide mapping of EARLY BOLTING IN SHORT DAYS (EBS) binding sites in Arabidopsis thaliana
Organism Arabidopsis thaliana
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary A total of 2,356 genes were identified as EBS target loci by ChIP-seq
 
Overall design EBS-binding regions were immunoprecipitated by ChIP from Arabidopsis seedlings, and sequenced on an Illumina Hi-seq 2500.
 
Contributor(s) Li Z, Fu X, He Y
Citation(s) 30082786
Submission date Sep 28, 2017
Last update date May 15, 2019
Contact name Xing Fu
E-mail(s) xfu@sibs.ac.cn
Organization name Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences
Street address 3888 Chenhua Road
City Shanghai
ZIP/Postal code 201602
Country China
 
Platforms (1)
GPL17639 Illumina HiSeq 2500 (Arabidopsis thaliana)
Samples (6)
GSM2796111 EBS ChIPSeq-1 (EBS.1)
GSM2796112 EBS ChIPSeq-2 (EBS.2)
GSM2796113 EBS ChIPSeq-3 (EBS.3)
Relations
BioProject PRJNA412460
SRA SRP119038

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104368_RAW.tar 190.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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