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Series GSE104323 Query DataSets for GSE104323
Status Public on Dec 13, 2017
Title Transcriptome analysis of single cells from the developing mouse dentate gyrus
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA sequencing was performed on 24185 single cells from dentate gyrus of CD-1, C57Bl/6, or hGFAP-GFP reporter mice, sampled at ages ranging from embryonal day 16.5 to postnatal day 132, with the aim of comparing peri- and postnatal neurogenesis in the dentate gyrus
 
Overall design 24185 single cells isolated from the dentate gyrus of mice
 
Contributor(s) Hochgerner H, Zeisel A, Linnarsson S
Citation(s) 29335606
Submission date Sep 27, 2017
Last update date Mar 19, 2019
Contact name Sten Linnarsson
Organization name Karolinska Institutet
Department Medical Biochemistry and Biophysics
Lab Molecular Neurobiology
Street address Scheeles väg 1
City Stockholm
ZIP/Postal code 171 65
Country Sweden
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (232)
GSM2795225 E16.5,CD-1,Cajal-Retzius-1
GSM2795226 E16.5,CD-1,Endothelial-1
GSM2795227 E16.5,CD-1,Ependymal-1
This SubSeries is part of SuperSeries:
GSE95753 Transcriptome analysis of single cells from the mouse dentate gyrus
Relations
BioProject PRJNA412365
SRA SRP118985

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104323_10X_expression_data_V2.tab.gz 45.5 Mb (ftp)(http) TAB
GSE104323_metadata_barcodes_24185cells.txt.gz 463.7 Kb (ftp)(http) TXT
Raw data are available in SRA
Processed data is available on Series record

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