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Series GSE104278 Query DataSets for GSE104278
Status Public on Jul 27, 2018
Title rne Rhodobacter sphaeroides
Organism Cereibacter sphaeroides
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of wild type and mutant strain with temperature-sensitive RNase E. Goal: to study the effect of RNase E on the transcriptome
 
Overall design Total of 12 samples. Wild type and mutant were grown to exponential phase at 32 °C or 42° degree celsius. Biological triplicates were performed
 
Contributor(s) Förstner KU, Reuscher C, Haberzettl K, Weber L, Klug G
Citation(s) 30456366
Submission date Sep 26, 2017
Last update date Jul 25, 2021
Contact name Konrad U. Förstner
E-mail(s) foerstner@zbmed.de
Organization name ZB MED - Information Centre for Life Sciences
Department Information Services
Lab Förstner Lab
Street address Gleueler Str. 60
City Cologne
State/province North Rhine-Westphalia
ZIP/Postal code 50931
Country Germany
 
Platforms (1)
GPL24048 Illumina NextSeq 500 (Rhodobacter sphaeroides)
Samples (12)
GSM2793963 RNA from wild type grown at 32 °C Replicate 1
GSM2793964 RNA from wild type grown at 32 °C Replicate 2
GSM2793965 RNA from wild type grown at 32 °C Replicate 3
Relations
BioProject PRJNA412226
SRA SRP118912

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104278_RAW.tar 250.6 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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