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Series GSE103894 Query DataSets for GSE103894
Status Public on Dec 13, 2017
Title APC_ChIP-seq
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Anti-APC ChIP-seq data were collected from HCT-116 cells and 44,771 genomic sequences were found to be enriched.
 
Overall design Examination by ChIP-seq of chromatin binding profiles for APC in a colon cancer cell line expressing wild-type APC and a degradation-resistant β-catenin that constitutively activates canonical WNT signaling
 
Contributor(s) Groden J, Hankey W, Hancioglu B
Citation(s) 29212857
Submission date Sep 15, 2017
Last update date May 15, 2019
Contact name Joanna Groden
E-mail(s) groden.2@osu.edu
Phone (614) 688-4301
Organization name The Ohio State University, College of Medicine
Department Department of Cancer Biology and Genetics
Street address 986 BRT 460 West 12th Ave.
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (2)
GSM2785712 HCT-116 Input ChIP-seq
GSM2785713 HCT-116 APC ChIP-seq
This SubSeries is part of SuperSeries:
GSE103895 Transcriptional profiles reflect the mutational mechanism by which Wnt signaling is activated in mouse tumors and predict outcome in colorectal cancer patients
Relations
BioProject PRJNA407597
SRA SRP117783

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Supplementary file Size Download File type/resource
GSE103894_Annotated_Peaks_APC_ChIP-seq_3.xlsx 4.1 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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