GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE103894 Query DataSets for GSE103894
Status Public on Dec 13, 2017
Title APC_ChIP-seq
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Anti-APC ChIP-seq data were collected from HCT-116 cells and 44,771 genomic sequences were found to be enriched.
Overall design Examination by ChIP-seq of chromatin binding profiles for APC in a colon cancer cell line expressing wild-type APC and a degradation-resistant β-catenin that constitutively activates canonical WNT signaling
Contributor(s) Groden J, Hankey W, Hancioglu B
Citation(s) 29212857
Submission date Sep 15, 2017
Last update date May 15, 2019
Contact name Joanna Groden
Phone (614) 688-4301
Organization name The Ohio State University, College of Medicine
Department Department of Cancer Biology and Genetics
Street address 986 BRT 460 West 12th Ave.
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (2)
GSM2785712 HCT-116 Input ChIP-seq
GSM2785713 HCT-116 APC ChIP-seq
This SubSeries is part of SuperSeries:
GSE103895 Transcriptional profiles reflect the mutational mechanism by which Wnt signaling is activated in mouse tumors and predict outcome in colorectal cancer patients
BioProject PRJNA407597
SRA SRP117783

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103894_Annotated_Peaks_APC_ChIP-seq_3.xlsx 4.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap