NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE103840 Query DataSets for GSE103840
Status Public on Apr 10, 2018
Title Single-cell RNA sequencing of sensory neurons in the mouse dorsal horn
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have used large-scale single-cell RNA sequencing (RNA-seq) to classify sensory neurons in the mouse dorsal horn, with the purpose of identifying neuronal subclasses, in particular making a systematic and comprehensive molecular classification of spinal cord sensory neurons, providing the neuronal basis for somatic sensation.
 
Overall design 1545 single cells from the mouse brain dorsal horn: 637 from strain C57/bl6, 537 from a vGat-cre-tdTomato line, and 371 from a vGlut2-eGFP line.
 
Contributor(s) Häring M, Zeisel A, Linnarsson S, Ernfors P
Citation(s) 29686262
Submission date Sep 13, 2017
Last update date Mar 19, 2019
Contact name Sten Linnarsson
Organization name Karolinska Institutet
Department Medical Biochemistry and Biophysics
Lab Molecular Neurobiology
Street address Scheeles väg 1
City Stockholm
ZIP/Postal code 171 65
Country Sweden
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (1545)
GSM2782726 1772072240_A12
GSM2782727 1772072240_D04
GSM2782728 1772072240_E01
Relations
BioProject PRJNA407224
SRA SRP117627

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103840_molecule_counts.xlsx 117.7 Mb (ftp)(http) XLSX
Raw data are available in SRA
Processed data is available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap