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Series GSE103322 Query DataSets for GSE103322
Status Public on Nov 30, 2017
Title Single cell RNA-seq analysis of head and neck cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To understand the diversity of expression states within head and neck cancers, we profiled 5902 single cells from 18 patients with oral cavity tumors by single cell RNA-seq
 
Overall design Tumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
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Authors state that "We are currently unable to provide the raw data due to privacy concerns, but will have the raw data available once we obtain permission from our institution."
 
Contributor(s) Tirosh I, Puram S, Parikh A
Citation(s) 29198524
Submission date Aug 30, 2017
Last update date Mar 26, 2019
Contact name Itay Tirosh
E-mail(s) Tirosh.itay@gmail.com
Organization name Broad Institute
Street address 7 cambridge center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (5901)
GSM2760545 HN28_P15_D06_S330_comb
GSM2760546 HN28_P6_G05_S173_comb
GSM2760547 HN26_P14_D11_S239_comb
Relations
BioProject PRJNA401654

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103322_HNSCC_all_data.txt.gz 86.0 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data not provided for this record
Processed data is available on Series record

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