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Series GSE102167 Query DataSets for GSE102167
Status Public on Aug 21, 2017
Title Plasmodium berghei transcriptome for female gametocytes, male gametocytes, and asexual erythrocytic stages
Organism Plasmodium berghei ANKA
Experiment type Expression profiling by high throughput sequencing
Summary Plasmodium berghei transcriptome for female gametocytes, male gametocytes, and asexual erythrocytic stages
 
Overall design These transcriptomes are derived from isolated female and male gametocytes, and asexual erthythrocytic stages of Plasmodium berghei. Samples are of 820cl1m1cl1 parasites, which express RFP and GFP in female and male gametocytes respectively. Gametocytes were purified by flow cytometry, and asexual stages were derived from mouse blood depleted of host cells by CF11 columns followed by saponin lysis.
 
Contributor(s) Yeoh LM, Goodman CD, Mollard V, McFadden GI, Ralph SA
Citation(s) 28923023
BioProject PRJNA374918
Submission date Aug 02, 2017
Last update date May 15, 2019
Contact name Lee Ming Yeoh
Organization name The University of Melbourne
Street address Bio21 Institute, 30 Flemington Rd
City Parkville
State/province VIC
ZIP/Postal code 3052
Country Australia
 
Platforms (1)
GPL23858 Illumina HiSeq 2500 (Plasmodium berghei ANKA)
Samples (9)
GSM2729795 Female gametocytes (1/3)
GSM2729796 Female gametocytes (2/3)
GSM2729797 Female gametocytes (3/3)
Relations
SRA SRP099925

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102167_differentially-expressed_genes_female.tsv.gz 260.3 Kb (ftp)(http) TSV
GSE102167_differentially-expressed_genes_male.tsv.gz 235.3 Kb (ftp)(http) TSV
GSE102167_rpkm.tsv.gz 379.9 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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