|
| Status |
Public on Aug 02, 2017 |
| Title |
Androgen receptor variants mediate DNA repair after prostate cancer irradiation |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We employ ChIP- seq methodology, to study the effect of ionizing radiation treatment in genome wide binding of RNA pol-II and AR
|
| |
|
| Overall design |
ChIP-seq using RNApol-II and AR antibodies was conductd in R1-D567 irradiated cells with non radiated cells as control
|
| |
|
| Contributor(s) |
Yin Y, Ramanand SG, Gao Y, Kanchwala MS, Xing C, Mani RS, Raj GV |
| Citation(s) |
28754673 |
| |
| Submission date |
Aug 02, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Ganesh V Raj |
| E-mail(s) |
Ganesh.Raj@UTSouthwestern.edu
|
| Organization name |
UT SOUTHWESTERN MEDICAL CENTER
|
| Department |
Department of Urology
|
| Street address |
5323 Harry Hines Blvd
|
| City |
Dallas |
| State/province |
TX |
| ZIP/Postal code |
75390-9110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (6)
|
| GSM2729731 |
Input R1-D567 non radiated control cells |
| GSM2729732 |
ChIP-seq RNApolII R1-D567 non radiated control cells |
| GSM2729733 |
ChIP-seq AR R1-D567 non radiated control cells |
|
| Relations |
| BioProject |
PRJNA396893 |
| SRA |
SRP114681 |
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