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Series GSE102164 Query DataSets for GSE102164
Status Public on Aug 02, 2017
Title Androgen receptor variants mediate DNA repair after prostate cancer irradiation
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We employ ChIP- seq methodology, to study the effect of ionizing radiation treatment in genome wide binding of RNA pol-II and AR
Overall design ChIP-seq using RNApol-II and AR antibodies was conductd in R1-D567 irradiated cells with non radiated cells as control
Contributor(s) Yin Y, Ramanand SG, Gao Y, Kanchwala MS, Xing C, Mani RS, Raj GV
Citation(s) 28754673
Submission date Aug 02, 2017
Last update date Jul 25, 2021
Contact name Ganesh V Raj
Department Department of Urology
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390-9110
Country USA
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM2729728 Input R1-D567 Radiated cells
GSM2729729 ChIP-seq RNApolII R1-D567 Radiated cells
GSM2729730 ChIP-seq AR R1-D567 Radiated cells
BioProject PRJNA396893
SRA SRP114681

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Supplementary file Size Download File type/resource
GSE102164_RAW.tar 942.7 Mb (http)(custom) TAR (of BIGWIG, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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