NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE101115 Query DataSets for GSE101115
Status Public on Dec 03, 2017
Title The hepatic circadian clock fine-tunes the lipogenic response to feeding through RORa/g [seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary We address the function of ROR in the mouse liver metabolism
 
Overall design We performed GRO-seq and RORa/RORc ChIP-seq in livers of control mice and ROR LDKO mice at 5am of the day
 
Contributor(s) Damle M, Zhang Y, Fang B
Citation(s) 28747429
Submission date Jul 10, 2017
Last update date Jul 25, 2021
Contact name Manashree Damle
E-mail(s) damle@molbio.mgh.harvard.edu
Organization name Massachusetts General Hospital
Department Molecular Biology
Lab Bob Kingston
Street address 185 Cambridge Street
City Boston
State/province MA
ZIP/Postal code 02155
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM2699481 RORa ChIP-seq at ZT22 (Control)
GSM2699482 RORa ChIP-seq at ZT22 (ROR LDKO)
GSM2699483 RORg ChIP-seq at ZT22 (Control)
This SubSeries is part of SuperSeries:
GSE101116 The hepatic circadian clock fine-tunes the lipogenic response to feeding through RORa/g
Relations
BioProject PRJNA393732
SRA SRP111487

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101115_Down_Regulated_eRNAs.bed.gz 7.1 Kb (ftp)(http) BED
GSE101115_RAW.tar 1.5 Gb (http)(custom) TAR (of BIGWIG)
GSE101115_RORa_Peaks_ZT22_ChIPseq.bed.gz 77.4 Kb (ftp)(http) BED
GSE101115_RORag_Overlapped_Peaks_ZT22_ChIPseq.bed.gz 29.4 Kb (ftp)(http) BED
GSE101115_RORg_Peaks_ZT22_ChIPseq.bed.gz 20.7 Kb (ftp)(http) BED
GSE101115_Up_Regulated_eRNAs.bed.gz 4.9 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap