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Series GSE100840 Query DataSets for GSE100840
Status Public on May 16, 2018
Title In vivo reprogramming drives Kras-induced cancer development [expression]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Accumulation of genetic mutations is thought to be a primary cause of cancer. However, a set of genetic mutations sufficient for cancer development remains unclear in most cancers, including pancreatic cancer. Here, we examined the effect of in vivo reprogramming on Kras-induced cancer development. We first demonstrate that Kras and p53 mutations are insufficient to induce activation of ERK signaling and cancer development in the pancreas. We next show that short transient expression of reprogramming factors (1-3 days) in pancreatic acinar cells results in repression of acinar cell enhancers and reversible loss of acinar cell properties. Notably, the transient expression of reprogramming factors in Kras mutant mice is sufficient to induce robust and persistent activation of ERK signaling in acinar cells and rapid formation of pancreatic ductal adenocarcinoma (PDAC). In contrast, forced expression of acinar cell-related transcription factors inhibits pancreatitis-induced activation of ERK signaling and development of precancerous lesions in Kras-mutated acinar cells.
 
Overall design Analyzing gene expression profiles in OSKM induced pancreas and stomach
 
Contributor(s) Yamamoto T, Yamada Y
Citation(s) 29802314
Submission date Jul 05, 2017
Last update date Jul 25, 2021
Contact name Yasuhiro Yamada
E-mail(s) yyamada@m.u-tokyo.ac.jp
Organization name University of Tokyo
Department Department of Molecular Pathology
Street address 7-3-1 Hongo, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM2694833 C-OSKM NoDox pancreas-1
GSM2694834 C-OSKM Dox3d pancreas-1
GSM2694835 KC-OSKM NoDox Stomach-1
This SubSeries is part of SuperSeries:
GSE100842 In vivo reprogramming drives Kras-induced cancer development
Relations
BioProject PRJNA393220

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE100840_RAW.tar 32.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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