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Status
Public on Sep 01, 2009
Title
Agilent-014693 Human Genome CGH Microarray 244A (Probe name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4411B
Description
Submission date
Aug 31, 2009
Last update date
Nov 14, 2014
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (2165)
GSM322064 , GSM322071 , GSM322072 , GSM322073 , GSM322074 , GSM322075
GSM447252 ,
GSM447253 ,
GSM447254 ,
GSM447255 ,
GSM447256 ,
GSM447257 ,
GSM447258 ,
GSM447259 ,
GSM447260 ,
GSM447261 ,
GSM447262 ,
GSM447263 ,
GSM447264 ,
GSM447265 ,
GSM447266 ,
GSM447267 ,
GSM447268 ,
GSM447269 ,
GSM447270 ,
GSM447271 ,
GSM447272 ,
GSM447273 ,
GSM447274 ,
GSM447275 ,
GSM447276 ,
GSM447277 ,
GSM447278 ,
GSM447279 ,
GSM447280 ,
GSM447281 ,
GSM447282 ,
GSM447283 ,
GSM447284 ,
GSM447285 ,
GSM447286 ,
GSM447287 ,
GSM447288 ,
GSM447289 ,
GSM447290 ,
GSM447291 ,
GSM447292 ,
GSM447293 ,
GSM447294 ,
GSM447295 ,
GSM447296 ,
GSM447297 ,
GSM447298 ,
GSM447299 ,
GSM447300 ,
GSM447301 ,
GSM447302 ,
GSM447303 ,
GSM447304 ,
GSM447305 ,
GSM452822 ,
GSM452835 ,
GSM452839 ,
GSM452840 ,
GSM463045 ,
GSM463046 ,
GSM463047 ,
GSM463048 ,
GSM463049 ,
GSM463050 ,
GSM463051 ,
GSM463052 ,
GSM463053 ,
GSM463054 ,
GSM463055 ,
GSM463056 ,
GSM463057 ,
GSM463058 ,
GSM463059 ,
GSM463060 ,
GSM463061 ,
GSM463062 ,
GSM463063 ,
GSM463064 ,
GSM463065 ,
GSM463066 ,
GSM463067 ,
GSM463068 ,
GSM463069 ,
GSM463070 ,
GSM463071 ,
GSM463072 ,
GSM463073 ,
GSM463074 ,
GSM463075 ,
GSM463076 ,
GSM463077 ,
GSM463078 ,
GSM463079 ,
GSM463080 ,
GSM463081 ,
GSM463082 ,
GSM463083 ,
GSM463084 ,
GSM463085 ,
GSM463086 ,
GSM463087 ,
GSM463088 ,
GSM463089 ,
GSM463090 ,
GSM463091 ,
GSM463092 ,
GSM463093 ,
GSM463094 ,
GSM463095 ,
GSM463096 ,
GSM463097 ,
GSM463098 ,
GSM463099 ,
GSM463100 ,
GSM463101 ,
GSM463102 ,
GSM463103 ,
GSM463104 ,
GSM463105 ,
GSM463106 ,
GSM463107 ,
GSM463108 ,
GSM463109 ,
GSM463110 ,
GSM463111 ,
GSM463112 ,
GSM463113 ,
GSM463114 ,
GSM463115 ,
GSM463116 ,
GSM463117 ,
GSM463118 ,
GSM463119 ,
GSM463120 ,
GSM463121 ,
GSM463122 ,
GSM463123 ,
GSM463124 ,
GSM463125 ,
GSM463126 ,
GSM463127 ,
GSM463128 ,
GSM463129 ,
GSM463130 ,
GSM463131 ,
GSM463132 ,
GSM463133 ,
GSM463134 ,
GSM463135 ,
GSM463136 ,
GSM463137 ,
GSM463138 ,
GSM463139 ,
GSM463140 ,
GSM463141 ,
GSM463142 ,
GSM470069 ,
GSM470070 ,
GSM470071 ,
GSM470072 ,
GSM470073 ,
GSM470074 ,
GSM470075 ,
GSM470076 ,
GSM470077 ,
GSM470078 ,
GSM470079 ,
GSM470080 ,
GSM470081 ,
GSM470082 ,
GSM470083 ,
GSM470084 ,
GSM470085 ,
GSM470086 ,
GSM470087 ,
GSM470088 ,
GSM470089 ,
GSM470090 ,
GSM470091 ,
GSM470092 ,
GSM470093 ,
GSM470094 ,
GSM470095 ,
GSM470096 ,
GSM470097 ,
GSM470098 ,
GSM470099 ,
GSM470100 ,
GSM470101 ,
GSM470102 ,
GSM470103 ,
GSM470104 ,
GSM470105 ,
GSM470106 ,
GSM470107 ,
GSM470108 ,
GSM470109 ,
GSM470110 ,
GSM470111 ,
GSM470112 ,
GSM470113 ,
GSM470114 ,
GSM470115 ,
GSM470116 ,
GSM470117 ,
GSM470118 ,
GSM470119 ,
GSM470120 ,
GSM470121 ,
GSM470122 ,
GSM470123 ,
GSM470124 ,
GSM470125 ,
GSM470126 ,
GSM470127 ,
GSM470128 ,
GSM470129 ,
GSM470130 ,
GSM470131 ,
GSM470132 ,
GSM470133 ,
GSM470134 ,
GSM470135 ,
GSM470136 ,
GSM470137 ,
GSM470138 ,
GSM470139 ,
GSM470140 ,
GSM470141 ,
GSM470142 ,
GSM470143 ,
GSM470144 ,
GSM470145 ,
GSM470146 ,
GSM470147 ,
GSM470148 ,
GSM487663 ,
GSM487664 ,
GSM487665 ,
GSM487666 ,
GSM487667 ,
GSM487668 ,
GSM487669 ,
GSM487670 ,
GSM487671 ,
GSM487672 ,
GSM487673 ,
GSM487674 ,
GSM487675 ,
GSM487676 ,
GSM487677 ,
GSM487678 ,
GSM487679 ,
GSM487680 ,
GSM487681 ,
GSM487682 ,
GSM487714 ,
GSM487715 ,
GSM487716 ,
GSM487717 ,
GSM487718 ,
GSM487719 ,
GSM487720 ,
GSM487721 ,
GSM487722 ,
GSM487723 ,
GSM487724 ,
GSM487725 ,
GSM487726 ,
GSM487727 ,
GSM487728 ,
GSM487729 ,
GSM487730 ,
GSM487731 ,
GSM487732 ,
GSM487733 ,
GSM489756 ,
GSM489757 ,
GSM489758 ,
GSM489759 ,
GSM489760 ,
GSM489761 ,
GSM489762 ,
GSM489763 ,
GSM489764 ,
GSM510669 ,
GSM510670 ,
GSM510671 ,
GSM510672 ,
GSM510673 ,
GSM510674 ,
GSM510675 ,
GSM510676 ,
GSM510677 ,
GSM510678 ,
GSM510679 ,
GSM510680 ,
GSM510681 ,
GSM510682 ,
GSM510683 ,
GSM510684 ,
GSM510685 ,
GSM510686 ,
GSM510687 ,
GSM510688 ,
GSM510689 ,
GSM510690 ,
GSM510691 ,
GSM510692 ,
GSM510693 ,
GSM510694 ,
GSM510695 ,
GSM510696 ,
GSM510697 ,
GSM510698 ,
GSM510699 ,
GSM510700 ,
GSM510701 ,
GSM510702 ,
GSM510703 ,
GSM510704 ,
GSM510705 ,
GSM510706 ,
GSM510707 ,
GSM510708 ,
GSM510709 ,
GSM510710 ,
GSM510711 ,
GSM510712 ,
GSM510713 ,
GSM510714 ,
GSM510715 ,
GSM510716 ,
GSM510717 ,
GSM510718 ,
GSM510719 ,
GSM510720 ,
GSM510721 ,
GSM510722 ,
GSM510723 ,
GSM510724 ,
GSM510725 ,
GSM510726 ,
GSM510727 ,
GSM510728 ,
GSM510729 ,
GSM510730 ,
GSM510731 ,
GSM510732 ,
GSM510733 ,
GSM510734 ,
GSM510735 ,
GSM510736 ,
GSM510737 ,
GSM510738 ,
GSM510739 ,
GSM510740 ,
GSM510741 ,
GSM510742 ,
GSM510743 ,
GSM510744 ,
GSM510745 ,
GSM510746 ,
GSM510747 ,
GSM510748 ,
GSM510749 ,
GSM510750 ,
GSM510751 ,
GSM510752 ,
GSM510753 ,
GSM510754 ,
GSM510755 ,
GSM510756 ,
GSM510757 ,
GSM510758 ,
GSM510759 ,
GSM510760 ,
GSM510761 ,
GSM510762 ,
GSM510763 ,
GSM510764 ,
GSM510765 ,
GSM510766 ,
GSM510767 ,
GSM510768 ,
GSM510769 ,
GSM510770 ,
GSM510771 ,
GSM510772 ,
GSM510773 ,
GSM510774 ,
GSM510775 ,
GSM510776 ,
GSM510777 ,
GSM510778 ,
GSM510779 ,
GSM510780 ,
GSM510781 ,
GSM510782 ,
GSM510783 ,
GSM510784 ,
GSM510785 ,
GSM510786 ,
GSM510787 ,
GSM510788 ,
GSM510790 ,
GSM510791 ,
GSM510792 ,
GSM510793 ,
GSM510794 ,
GSM510795 ,
GSM510796 ,
GSM510797 ,
GSM510798 ,
GSM510799 ,
GSM510800 ,
GSM510801 ,
GSM510802 ,
GSM510803 ,
GSM510804 ,
GSM510805 ,
GSM510806 ,
GSM510807 ,
GSM510808 ,
GSM510809 ,
GSM510810 ,
GSM510811 ,
GSM510812 ,
GSM510813 ,
GSM510814 ,
GSM510815 ,
GSM510816 ,
GSM510817 ,
GSM510818 ,
GSM510819 ,
GSM510820 ,
GSM510821 ,
GSM510822 ,
GSM510823 ,
GSM510824 ,
GSM510825 ,
GSM510826 ,
GSM510827 ,
GSM510828 ,
GSM510829 ,
GSM510830 ,
GSM510831 ,
GSM510832 ,
GSM510833 ,
GSM510834 ,
GSM510835 ,
GSM510836 ,
GSM511243 ,
GSM511244 ,
GSM511245 ,
GSM511246 ,
GSM511247 ,
GSM511248 ,
GSM511249 ,
GSM511250 ,
GSM511251 ,
GSM511252 ,
GSM511253 ,
GSM511254 ,
GSM511255 ,
GSM511256 ,
GSM511257 ,
GSM511258 ,
GSM511259 ,
GSM511260 ,
GSM511261 ,
GSM511262 ,
GSM511263 ,
GSM511264 ,
GSM511265 ,
GSM511266 ,
GSM511267 ,
GSM511268 ,
GSM511269 ,
GSM511270 ,
GSM511271 ,
GSM511272 ,
GSM511273 ,
GSM511274 ,
GSM511275 ,
GSM511276 ,
GSM511277 ,
GSM511278 ,
GSM511279 ,
GSM511280 ,
GSM511281 ,
GSM511282 ,
GSM511283 ,
GSM511284 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (65)
GSE12830 Osteosarcoma Copy Number Analysis
GSE12885 Genome-wide changes in DNA methylation and copy number play a role in deregulation of gene expression in osteosarcoma
GSE17907 Molecular profiling of ERBB2-amplified breast cancers
GSE18122 Functional remodeling of primary and immortalized progenitor and intermediate cells
GSE18638 Agilent 244K aCGH data for colon cancer samples
GSE19003 Seeking novel mammalian genes using transcript profiling and genotyping of a human radiation hybrid panel
GSE19566 Genomic profiling of gastric carcinoma in situ by array-based comparative genomic hybridization
GSE19574 Genomic profiling of gastric adenomas by array-based comparative genomic hybridization
GSE19575 Genomic profiling of gastric carcinoma in situ and gastric adenomas by array-based comparative genomic hybridization
GSE19612 A Hierarchy of Self-Renewing Tumor-Initiating Cell Types in Glioblastoma
GSE20393 Agilent 244A aCGH array for breast, lung, melanoma, ovary, and prostate
GSE20394 Breast Cancer. Ull-series. 167 samples
GSE20574 Agilent 244A aCGH array for comparison of lung tumor CNA to high-throughput sequencing data
GSE20585 The mutation spectrum revealed by paired genome sequences from a lung cancer patient
GSE22237 Chromosomal aberration of malignant pleural mesothelioma cell lines
GSE22785 Integrated genome, transcriptome and translatome profiling of neuroblastoma cells
GSE22928 Genome-Wide Analysis of Somatic Copy Number Alterations (CGH, SNP) and Gene Expression (RNA-seq) in Metastatic Melanoma
GSE23056 Genome-Wide Analysis of Somatic Copy Number Alterations and Gene Expression in Metastatic Melanoma
GSE23720 High-resolution comparative genomic hybridization of inflammatory breast cancer and identification of candidate genes
GSE23768 Diverse somatic mutation patterns and pathway alterations in human cancers
GSE24823 Genomic profiling of typical and atypical chronic lymphocytic leukemia patients using Agilent Whole Human Genome microarrays
GSE26849 MMRC aCGH reference collection
GSE26863 MMRC expression and aCGH reference collection
GSE27333 Gain of the oncostatin M receptor in cervical squamous cell carcinoma is associated with adverse clinical outcome
GSE27574 High-resolution analysis of copy number changes in circulating and disseminated tumor cells in breast cancer patients
GSE27673 An integrated genomics approach for novel biomarker discovery in squamous cell cervical carcinoma
GSE27892 Single-cell copy number varation detection
GSE29211 The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma
GSE29902 Mesothelioma tumor aCGH profiles
GSE31219 Single-cell copy number varation detection: blastomeres
GSE33428 Copy number variation profiling of gastric tissues: Cancer Samples vs. Matched Adjacent Noncancerous Samples
GSE33429 Cancer Samples vs. Matched Adjacent Noncancerous Samples
GSE34979 Array-based CGH analysis of ccRCC derived cell lines
GSE34985 Analysis of ccRCC derived cell lines
GSE35189 Paradigm Test Set aCGH Array
GSE35191 Paradigm Test Set
GSE35988 The Mutational Landscape of Lethal Castrate Resistant Prostate Cancer
GSE40048 Agilent 244A aCGH array for squamous cell carcinoma of the lung
GSE40089 Squamous cell carcinoma of the lung
GSE40989 Follicular Lymphoma Array CGH
GSE44271 Myeloma in African Americans: Myeloma gDNA vs. Control gDNA
GSE47630 Agilent 244K CGH data for esophageal squamous cell carcinoma (ESCC)
GSE47912 Array CGH analysis in gastric gastrointestinal stromal tumors (GISTs)
GSE47913 Integrated array CGH and expression profiling revealed candidate biomarkers in gastrointestinal stromal turmor
GSE48548 Follicular lymphoma in situ and partial involvement by follicular lymphoma are clona lesions that carry the t(14;18) and lack genetic secondary alterations
GSE49808 Copy number data from five primary human glioblastomas (frozen surgical resection)
GSE49810 Expression and copy number data from five primary human glioblastomas
GSE50750 Drug Synergy Screen and Network Modeling in Dedifferentiated Liposarcoma (DDLS) part 2
GSE50751 Drug Synergy Screen and Network Modeling in Dedifferentiated Liposarcoma (DDLS)
GSE56654 aCGH profiling of MYCN-amplified Neuroblastoma cell lines
GSE56656 Translational compensation of genomic instability in neuroblastoma
GSE57942 aCGH data of 5 cases of Hepatosplenic T-cell lymphoma
GSE57944 Hepatosplenic T cell lymphoma
GSE58342 Somatic copy number alterations associated with populations and clinical characteristics in ovarian clear cell adenocarcinoma
GSE58886 Drug screening and genomic analyses of HER2 positive breast cancer cell lines reveal predictors for treatment response [CGH]
GSE58887 Drug screening and genomic analyses of HER2 positive breast cancer cell lines reveal predictors for treatment response
GSE65181 Genomic profiling of IPMN with an associated invasive carcinomas (IPMN-inv) and invasive ductal carcinomas (IDC) by array-based comparative genomic hybridization
GSE67604 Genomic copy number aberrations of 11 gastric cancer cell lines
GSE72652 Mapping alterations spatially and temporally during early stages of breast tumourigenesis [aCGH]
GSE72653 Mapping alterations spatially and temporally during early stages of breast tumourigenesis
GSE74839 Genomic profiling of 49 gastric cancer cell lines by array-based comparative genomic hybridization
GSE86607 Genomic copy number aberrations in multiple synchronous lung cancer.
GSE89191 Copy number profiling of 5-FU resistant gastric cancer cell line compared to the parental cell line
GSE107918 Drug sensitivity screening and genomic characterization of 45 HPV-negative head and neck carcinoma cell lines for novel biomarkers of drug efficacy [CGH]
GSE108062 Drug sensitivity screening and genomic characterization of 45 HPV-negative head and neck carcinoma cell lines for novel biomarkers of drug efficacy
Relations Alternative to
GPL4091
Data table header descriptions ID Agilent feature number
CONTROL_TYPE Control type
GB_ACC GenBankAccession
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GB_RANGE NCBI Build 35.1 Accession.Version[start..end]
Data table ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GB_RANGE A_14_P100000
FALSE
NM_019027 FLJ20273
RNA-binding protein
ref|NM_019027
chr4:040354254-040354313
hs|p14
Homo sapiens RNA-binding protein (FLJ20273), mRNA.
NC_000004.9[040354254..040354313]
A_14_P100001
FALSE
NM_032888 COL27A1
collagen, type XXVII, alpha 1
ref|NM_032888
chr9:114060099-114060146
hs|q32
Homo sapiens collagen, type XXVII, alpha 1 (COL27A1), mRNA.
NC_000009.9[114060099..114060146]
A_14_P100002
FALSE
chr18:014918795-014918854
hs|p11.21
NC_000018.8[014918795..014918854]
A_14_P100003
FALSE
NM_153262 SYT14
synaptotagmin XIV
ref|NM_153262
chr1:206501334-206501393
hs|q32.2
Homo sapiens synaptotagmin XIV (SYT14), mRNA.
NC_000001.8[206501334..206501393]
A_14_P100005
FALSE
AK055805 gb|AK055805|gb|AF218085
chr21:014876312-014876366
hs|q11.2
Homo sapiens cDNA FLJ31243 fis, clone KIDNE2005038.
NC_000021.7[014876312..014876366]
A_14_P100006
FALSE
chr7:054532292-054532351
hs|p11.2
NC_000007.11[054532292..054532351]
A_14_P100007
FALSE
NM_001008572 TTLL1
tubulin tyrosine ligase-like family, member 1
ref|NM_001008572|ref|NM_012263
chr22:041761894-041761953
hs|q13.2
Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 2, mRNA.
NC_000022.8[041761894..041761953]
A_14_P100008
FALSE
NM_002375 MAP4
microtubule-associated protein 4
ref|NM_002375|ref|NM_030885
chr3:048069785-048069844
hs|p21.31
Homo sapiens microtubule-associated protein 4 (MAP4), transcript variant 1, mRNA.
NC_000003.9[048069785..048069844]
A_14_P100009
FALSE
NM_020344 SLC24A2
solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
ref|NM_020344
chr9:019636699-019636758
hs|p22.1
Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (SLC24A2), mRNA.
NC_000009.9[019636699..019636758]
A_14_P100010
FALSE
NM_178443 URP2
UNC-112 related protein 2
ref|NM_178443|ref|NM_031471
chr11:063746801-063746857
hs|q13.1
Homo sapiens UNC-112 related protein 2 (URP2), transcript variant URP2LF, mRNA.
NC_000011.8[063746801..063746857]
A_14_P100011
FALSE
chr1:038500215-038500274
hs|p34.3
NC_000001.8[038500215..038500274]
A_14_P100012
FALSE
NM_015576 CAST1
CAZ-associated structural protein
ref|NM_015576
chr3:056211013-056211072
hs|p14.3
Homo sapiens CAZ-associated structural protein (CAST1), mRNA.
NC_000003.9[056211013..056211072]
A_14_P100013
FALSE
chr3:049117495-049117551
hs|p21.31
NC_000003.9[049117495..049117551]
A_14_P100014
FALSE
NM_145015 MRGPRF
MAS-related GPR, member F
ref|NM_145015
chr11:068528459-068528518
hs|q13.3
Homo sapiens MAS-related GPR, member F (MRGPRF), mRNA.
NC_000011.8[068528459..068528518]
A_14_P100015
FALSE
NM_014012 REM1
RAS (RAD and GEM)-like GTP-binding 1
ref|NM_014012
chr20:029536104-029536161
hs|q11.21
Homo sapiens RAS (RAD and GEM)-like GTP-binding 1 (REM1), mRNA.
NC_000020.9[029536104..029536161]
A_14_P100016
FALSE
NM_006096 NDRG1
N-myc downstream regulated gene 1
ref|NM_006096
chr8:134367165-134367224
hs|q24.22
Homo sapiens N-myc downstream regulated gene 1 (NDRG1), mRNA.
NC_000008.9[134367165..134367224]
A_14_P100017
FALSE
NM_000305 PON2
paraoxonase 2
ref|NM_000305|ref|NM_001018161
chr7:094708478-094708537
hs|q21.3
Homo sapiens paraoxonase 2 (PON2), transcript variant 1, mRNA.
NC_000007.11[094708478..094708537]
A_14_P100018
FALSE
NM_003908 EIF2S2
eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
ref|NM_003908
chr20:032159244-032159303
hs|q11.22
Homo sapiens eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA.
NC_000020.9[032159244..032159303]
A_14_P100019
FALSE
chr13:085638560-085638619
hs|q31.1
NC_000013.9[085638560..085638619]
A_14_P100020
FALSE
NM_006217 SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
ref|NM_006217
chr3:168642463-168642522
hs|q26.1
Homo sapiens serpin peptidase inhibitor, clade I (pancpin), member 2 (SERPINI2), transcript variant 2, mRNA.
NC_000003.9[168642463..168642522]
236385 42153 Kbytes .Supplementary data files not provided
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