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Platform GPL8 Query DataSets for GPL8
Status Public on Apr 18, 2001
Title Cerebellargenexp
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Mus musculus
 
Description The Affymetrix GeneChip Mu11K was used to analyze the gene expression profile in developing mouse cerebellum (two GeneChips per E18, P7, P14, P21, and P56) to assist in the understanding of the genetic basis of cerebellar development in mice. The analysis showed 81.6% (10,321/12,654) of the genes represented on the GeneChip were expressed in the postnatal cerebellum, and among those, 8.7% (897/10,321) were differentially expressed with more than a two-fold change in their maximum and minimum expression levels during the developmental time course. All of these 897 differentially expressed genes were listed in this platform. The explanation of gene function classification is as follows: CGDD (cellular growth, differentiation, and death), CLAM (carbohydrate, lipid, and amino acid metabolism), CSC (cell structure and communication), IMTN (intra/intercellular molecular transport and neurotransmission), NNM (nucleotide and nucleic acid metabolism), ST (signal transduction), and TTPM (transcription, translation, and protein modification).
Keywords = cerebellum, postnatal development, high-density oligonucleotide array
 
Web link http://www.brain.riken.go.jp/labs/lmn
Submission date Apr 18, 2001
Last update date Mar 06, 2006
Contact name Yoshihiro Kagami
E-mail ykagami@brain.riken.go.jp
Phone +81-48-467-6079
Fax +81-48-467-6079
URL http://www.brain.riken.go.jp/labs/lmn
Organization name RIKEN Brain Science Institute
Department
Lab Molecular Neurogenesis
Street address 2-1 Hirosawa
City Wako-shi
State/province Saitama
ZIP/Postal code 351-0198
Country Japan
 
Samples (5) GSM50, GSM51, GSM52, GSM53, GSM54
Series (1)
GSE2 Cerebellar development

Data table header descriptions
ID
GB_ACC GenBank accession number
DESCRIPTION Gene or EST description
FUNCTION Gene function classification
SUBFUNCTION More specified gene function classification

Data table
ID GB_ACC DESCRIPTION FUNCTION SUBFUNCTION
1 AF044672 alpha-synuclein CGDD death
2 U96116 amyloid beta-peptide binding protein (ERAB) CGDD death
3 U54803 Caspase 3, apoptosis related cysteine protease CGDD death
4 AF011908 apoptosis associated tyrosine kinase (AATYK) CGDD death
5 AF027707 apoptosis activator Mtd (Mtd) CGDD death
6 D28492 Caspase 2 CGDD death
7 Y11905 BCL7C CGDD death
8 AF015769 manic fringe (manic-fringe) CGDD growth/diff.
9 AF051347 REX-3 CGDD growth/diff.
10 AF053454 tetraspan TM4SF (Tspan-6) CGDD growth/diff.
11 L12447 Insulin-like growth factor binding protein 5 CGDD growth/diff.
12 L22472 Bcl2-associated X protein CGDD growth/diff.
13 M35970 tumor metastatic process-associated protein (NM23) CGDD growth/diff.
14 M96163 serum inducible kinase (SNK) CGDD growth/diff.
15 U33629 Myeloid ecotropic viral integration site 1 CGDD growth/diff.
16 U41341 endothelial monocyte-activating polypeptide I CGDD growth/diff.
17 U42383 Fibroblast growth factor inducible 13 CGDD growth/diff.
18 U82441 Early B-cell factor 2 CGDD growth/diff.
19 U84411 protein tyrosine phosphatase (PRL-1) CGDD growth/diff.
20 U88567 secreted frizzled related protein sFRP-2 (Sfrp2) CGDD growth/diff.

Total number of rows: 897

Table truncated, full table size 45 Kbytes.






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