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Platform GPL7526 Query DataSets for GPL7526
Status Public on Nov 05, 2008
Title NimbleGen mouse (mm8) whole genome tiling array 4 of 4 [2007-08-17_MM8_Economy_04]
Technology type in situ oligonucleotide
Distribution commercial
Organism Mus musculus
Manufacturer Nimblegen Systems Inc.
Manufacture protocol Mouse whole genome tiling arrays
 
 
Submission date Oct 24, 2008
Last update date Jun 05, 2012
Organization NimbleGen Systems, Inc.
E-mail(s) geo@ncbi.nlm.nih.gov
Phone 608-218-7600
URL http://www.nimblegen.com/
Street address 504 S. Rosa Road
City Madison
State/province WI
ZIP/Postal code 53719
Country USA
 
Samples (17) GSM336522, GSM336523, GSM558455, GSM558459, GSM558463, GSM558467 
Series (7)
GSE13445 Large organized chromatin K9-modifications (LOCKs) distinguish differentiated from embryonic stem cells
GSE22475 Genome-wide location analysis of Dnmt3a-mediated epigenetic regulation in murine postnatal subventricular zone (SVZ) neural stem cells (NSCs) [NimbleGen]
GSE22476 Dnmt3a-dependent non-promoter DNA methylation facilitates transcription of neurogenic genes

Data table header descriptions
ID
Chromosome Chromosome number for each probe
RANGE_GB NCBI Build 36.1 RefSeq Assembly
SPOT_ID
RANGE_START Position for each probe
SEQUENCE Sequence for each probe.

Data table
ID Chromosome RANGE_GB SPOT_ID RANGE_START SEQUENCE
CHR14FS057853227 chr14 NC_000080.4 57853227 TTAGGAATCTCATTCCCATACTGAGATATTAAAGAAATGTTTTTCATCATCACCATGGCTATG
CHR14FS057853622 chr14 NC_000080.4 57853622 CTGGCTCATATAAATAGCCCAGTAATAGCTGCTAAGAGGATAGAGACTGTG
CHR14FS057853849 chr14 NC_000080.4 57853849 GGAGGAGAGAGTACCTTTAATTTTATACTATAGGAGGTAGAAGTTATTCCTGG
CHR14FS057854052 chr14 NC_000080.4 57854052 CATTGAAAAGCTTGGTAATAATGGTTGTCTCCTTTGAAGGATATGTGCCTTCTTCTAGA
CHR14FS057854260 chr14 NC_000080.4 57854260 TTTTGGTGGAGGTTATGCACAGCACCAGCAGGTCTAAATCATGGTGGATG
CHR14FS057854650 chr14 NC_000080.4 57854650 AGACATCAACCTTCATGTAAAACAGGAAGTTGGAGAACGCGAACTCTGTCT
CHR14FS057854846 chr14 NC_000080.4 57854846 CTTGGTAAAGTAACAAATGAGTTGACTGGGTGATGCTCTTCATTGAGAGGTGAGTTT
CHR14FS057855110 chr14 NC_000080.4 57855110 ATAACTTAAATGCTTGCAATTAGCCCTGCTCTGTTACACGGAGATTCAAATTGTCATATGG
CHR14FS057855309 chr14 NC_000080.4 57855309 CCCGTGTTCACTATAGTGAGCCTAGGAAATACATCTCTCTTTTACACAGAAAATGCA
CHR14FS057855510 chr14 NC_000080.4 57855510 GGGAAGGTTTTCATAGAATGAATCTCTGTCCAGTGGAGATGGAAGAATCCAT
CHR14FS057855710 chr14 NC_000080.4 57855710 AACAATGTCAGGTGTTTAAAGTGAGTGCTAACAAGTCTGTCTGCACGTGAG
CHR14FS057855875 chr14 NC_000080.4 57855875 GGATTATGAATAACATCCAACTAGTTAGTACAACCAACTGACCAGAAGTGTCTGAATT
CHR14FS057856076 chr14 NC_000080.4 57856076 ATTGATATCAGTGACAATTGTGACGATGGGAATGGAGGTGAGGATGTGGG
CHR14FS057856325 chr14 NC_000080.4 57856325 TGCTGAGGATGAGGTCGTGGGATGCTGAGGCTGAGGATGTGGGATGCTGA
CHR14FS057856530 chr14 NC_000080.4 57856530 AGAGATGAAAATGAAATGGCAATAGGGCGATGCCTACCTAGTAGTCATGAAC
CHR14FS057856685 chr14 NC_000080.4 57856685 ATAAATGTTAATGTTAATTTTGTTTCATTCCCTGGCATCTCAGCCTTCAGCCTTTT
CHR14FS057856935 chr14 NC_000080.4 57856935 CAGTGACAGGCGTTCTCTGTGGCCTTGCGGTCTTCTTTTAAGCTCTGTCA
CHR14FS057857130 chr14 NC_000080.4 57857130 AACTGCTTGAGTTTTTATCAAGTTATCTCTTCTTCAAACCCAACAAAATTGTACA
CHR14FS057857320 chr14 NC_000080.4 57857320 CCATTCTGAAATCAACATTTCATTGTGCCTAGTGCAACAGCTGTGCATGG
CHR14FS057857570 chr14 NC_000080.4 57857570 GGCTTTATAGGATGCGTTCATGGCACTGGGCATTAGGGCCAATGTCAGTG

Total number of rows: 2161268

Table truncated, full table size 212104 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL7526_2007-08-17_MM8_Economy_04.ndf.gz 45.3 Mb (ftp)(http) NDF
GPL7526_2007-08-17_MM8_Economy_04.pos.gz 8.1 Mb (ftp)(http) POS

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