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Status
Public on Oct 30, 2008
Title
Human_40K_partIII_FCCC_v1.0
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
Microarray Facility at Fox Chase Cancer Center, Philadelphia, PA
Manufacture protocol
Mirror glass slides used for robotically spotting 40000 cDNAs representing 28000 distinct human transcripts, 10000 identified by expressed sequence tags, and 2000 controls and blank spots. The complete array has 3 sub-arrays- part I, part II and part III.
Support
glass
Submission date
Sep 26, 2008
Last update date
Oct 30, 2008
Contact name
Julia Santucci-Pereira
E-mail(s)
ju.delbuono@gmail.com Organization name
Fox Chase Cancer Center
Lab
The Irma H. Russo, MD Breast Cancer Research Laboratory
Street address
333 Cottman Ave, P2051
City
Philadelphia
State/province
PA
ZIP/Postal code
19111
Country
USA
Samples (70)
GSM335736 , GSM335737 , GSM335738 , GSM335739 , GSM335740 , GSM335741
GSM335742 ,
GSM335743 ,
GSM335744 ,
GSM335745 ,
GSM335746 ,
GSM335747 ,
GSM335748 ,
GSM335749 ,
GSM335750 ,
GSM335751 ,
GSM335752 ,
GSM335753 ,
GSM335754 ,
GSM335755 ,
GSM335756 ,
GSM335757 ,
GSM335758 ,
GSM335759 ,
GSM335760 ,
GSM335761 ,
GSM335762 ,
GSM335763 ,
GSM335764 ,
GSM335765 ,
GSM335766 ,
GSM335767 ,
GSM335768 ,
GSM335769 ,
GSM335770 ,
GSM335771 ,
GSM335772 ,
GSM335773 ,
GSM335774 ,
GSM335775 ,
GSM335776 ,
GSM335777 ,
GSM335778 ,
GSM335779 ,
GSM335780 ,
GSM335781 ,
GSM335782 ,
GSM335783 ,
GSM335784 ,
GSM335785 ,
GSM335786 ,
GSM335787 ,
GSM335788 ,
GSM335789 ,
GSM335790 ,
GSM335791 ,
GSM335792 ,
GSM335793 ,
GSM335795 ,
GSM335796 ,
GSM335797 ,
GSM335798 ,
GSM335799 ,
GSM335800 ,
GSM335801 ,
GSM335802 ,
GSM335803 ,
GSM335804 ,
GSM335805 ,
GSM335806 Series (1)
GSE13293 Parity and the genomic signature in the Human Breast
Data table header descriptions ID GB_LIST GenBank Accession number
Insert Size* Cluster ID UG build Clone ID Vector Tissue Library NID Gene Name Gene Symbol Chromosome Band Markers Barcode Antibiotics SPOT_ID
Data table ID GB_LIST Insert Size* Cluster ID UG build Clone ID Vector Tissue Library NID Gene Name Gene Symbol Chromosome Band Markers Barcode Antibiotics SPOT_ID 1
AA970836 820
Hs.128738
unigene_build133
1560913
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3146126
hypothetical protein FLJ10040
FLJ10040
RG0580010276
Amp
2
AA974989 626
N/A
unigene_build133
1560949
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
RG0580010276
Amp
3
AA975033 758
N/A
unigene_build133
1561003
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
RG0580010276
Amp
4
AA977469 1697
Hs.10491
unigene_build133
1561038
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3154915
KIAA1237 protein
KIAA1237
sts-AA033743
RG0580010276
Amp
5
AA977513 1919
Hs.129019
unigene_build133
1561100
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3154959
EST
RG0580010276
Amp
6
AA975489 853
Hs.128439
unigene_build133
1561119
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3151281
ESTs
RG0580010276
Amp
7
AA975507 853
Hs.127528
unigene_build133
1561219
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3151299
ESTs
3
stSG53621
RG0580010276
Amp
8
AA953371 1176
N/A
unigene_build133
1561378
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
RG0580010276
Amp
9
AA953396 1176
Hs.127557
unigene_build133
1561411
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3117543
ESTs
RG0580010276
Amp
10
AA936421 853
Hs.163402
unigene_build133
1561529
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3094339
ESTs
RG0580010276
Amp
11
AA936436 1440
Hs.127100
unigene_build133
1561539
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3094354
ESTs
RG0580010276
Amp
12
AA953006 888
Hs.88143
unigene_build133
1561776
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3117153
ESTs
1
stSG47236
RG0580010276
Amp
13
AA953497 931
Hs.188929
unigene_build133
1562228
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3117644
ESTs
RG0580010276
Amp
14
AA954447 725
Hs.127393
unigene_build133
1562290
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3118142
EST
RG0580010276
Amp
15
AA954569 1000
Hs.127408
unigene_build133
1562367
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3118264
EST
RG0580010276
Amp
16
AA939336 1000
Hs.127219
unigene_build133
1562556
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3099249
ESTs
RG0580010276
Amp
17
AA953425 931
Hs.114658
unigene_build133
1562758
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3117572
ESTs
18
stSG53469
RG0580010276
Amp
18
AA934058 581
Hs.188779
unigene_build133
1562783
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3090326
ESTs
RG0580010276
Amp
19
AA953773 837
Hs.127504
unigene_build133
1563884
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
g3116691
EST
RG0580010276
Amp
20
AA918288 671
N/A
unigene_build133
1563932
pT7T3D-Pac (Pharmacia) with a modified polylinker
pooled
Soares_NFL_T_GBC_S1
RG0580010276
Amp
15552 2749 Kbytes .Supplementary data files not provided
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