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Platform GPL7068 Query DataSets for GPL7068
Status Public on Jul 29, 2008
Title Print_500
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Caenorhabditis elegans
Manufacturer Stanford Functional Genomics Facility, Stanford School of Medicine
Manufacture protocol Material is transferred from microtiter plate wells to the slide surface by an automated print head
Support glass
 
 
Submission date Jul 18, 2008
Last update date Jun 22, 2012
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (17) GSM306284, GSM306285, GSM306286, GSM306287, GSM306288, GSM306289 
Series (3)
GSE12094 Aging study
GSE12168 Aging Time course
GSE38877 Worms spun in centrifuge at elevated g values

Data table header descriptions
ID
MetaColumn
MetaRow
Column
Row
ORF ORF Name
Reporter Species
Repoter Biosequence Type
Repoter BioSequence PolymerType
Reporter Group[role]
Reporter ControlType
CompositeSequence Name
CompositeSequence BioSequence [Description]
CompositeSequence BioSequence [Gene Symbol]
CompositeSequence BioSequence [Gene Alias]
CompositeSequence Biosequence Type
CompositeSequence BioSequence PolymerType
Failed
SPOT_ID

Data table
ID MetaColumn MetaRow Column Row ORF Reporter Species Repoter Biosequence Type Repoter BioSequence PolymerType Reporter Group[role] Reporter ControlType CompositeSequence Name CompositeSequence BioSequence [Description] CompositeSequence BioSequence [Gene Symbol] CompositeSequence BioSequence [Gene Alias] CompositeSequence Biosequence Type CompositeSequence BioSequence PolymerType Failed SPOT_ID
1 1 1 1 1 AC3.5 Caenorhabditis elegans PCR_amplicon DNA Experimental AC3.5 glutamyl aminopeptidase gene DNA 0
27 1 1 1 2 C47E12.4 Caenorhabditis elegans PCR_amplicon DNA Experimental C47E12.4 inorganic pyrophosphatase gene DNA 0
53 1 1 1 3 T19B10.1 Caenorhabditis elegans PCR_amplicon DNA Experimental T19B10.1 Member of the cytochrome P450 family, has moderate similarity to cytochrome P450 4B1 (human CYP4B1), which is a putative risk factor for bladder cancer that is involved in the detoxification response and metabolism of drugs and lipids gene DNA 1
79 1 1 1 4 C43E11.5 Caenorhabditis elegans PCR_amplicon DNA Experimental C43E11.5 Member of the protein-tyrosine phosphatase family, which are involved in control of cell growth, proliferation, differentiation and transformation, has very strong similarity to uncharacterized C. elegans C50F2.5 gene DNA 0
105 1 1 1 5 D2005.4 Caenorhabditis elegans PCR_amplicon DNA Experimental D2005.4 Large protein of unknown function, has weak similarity over the C-terminus to a number of S. cerevisiae and C. elegans proteins, has weak similarity to several proteins of the human pathogen Plasmodium falciparum gene DNA 0
131 1 1 1 6 F37B4.2 Caenorhabditis elegans PCR_amplicon DNA Experimental F37B4.2 Putative intermediate filament protein ifc-1 Cel-IF-C1 gene DNA 0
157 1 1 1 7 W04G3.3 Caenorhabditis elegans PCR_amplicon DNA Experimental W04G3.3 Protein with strong similarity to C. elegans W04G3.8 gene product gene DNA 0
183 1 1 1 8 F54G8.2 Caenorhabditis elegans PCR_amplicon DNA Experimental F54G8.2 Protein with high similarity to diacylglycerol kinase 90 kDa (rat Dagk), contains two phorbol esters or diacylglycerol binding domains (C1 domain), two EF hand domains, and diacylglycerol kinase (DAGK) catalytic and accessory domains gene DNA 0
209 1 1 1 9 ZK682.5 Caenorhabditis elegans PCR_amplicon DNA Experimental ZK682.5 Protein containing ten leucine rich repeats, which mediate protein-protein interactions, has low similarity to a region of C. elegans SYM-1, which is required for attachment of body muscle to cuticle in absence of MEC-8 gene DNA 0
235 1 1 1 10 F07F6.2 Caenorhabditis elegans PCR_amplicon DNA Experimental F07F6.2 Protein of unknown function gene DNA 0
261 1 1 1 11 M110.6 Caenorhabditis elegans PCR_amplicon DNA Experimental M110.6 Protein of unknown function, has high similarity to uncharacterized C. elegans K09H9.4 gene DNA 1
287 1 1 1 12 F52B11.4 Caenorhabditis elegans PCR_amplicon DNA Experimental F52B11.4 CUTICLE COLLAGEN 34 gene DNA 0
313 1 1 1 13 C14E2.3 Caenorhabditis elegans PCR_amplicon DNA Experimental C14E2.3 Protein of unknown function gene DNA 0
339 1 1 1 14 Y57G11A.5 Caenorhabditis elegans PCR_amplicon DNA Experimental Y57G11A.5 Protein containing an RNA recognition motif (RRM, RBD, or RNP), has a region of moderate similarity to a region of splicing factor arginine serine rich 7 (human SFRS7), which is a splicing factor of the SR protein family gene DNA 0
365 1 1 1 15 T21B4.3 Caenorhabditis elegans PCR_amplicon DNA Experimental T21B4.3 Protein containing one C. elegans C-terminal C6 domain, which contain conserved cysteine residues, has moderate similarity to uncharacterized C. elegans R07B1.5 gene DNA 0
391 1 1 1 16 F43D2.3 Caenorhabditis elegans PCR_amplicon DNA Experimental F43D2.3 Protein with strong similarity to C. elegans Y37E11B.10 gene product gene DNA 0
417 1 1 1 17 F42G9.2 Caenorhabditis elegans PCR_amplicon DNA Experimental F42G9.2 Cyclophilin-related peptidylprolyl cis-trans-isomerase cyp-6 gene DNA 0
443 1 1 1 18 R11G1.3 Caenorhabditis elegans PCR_amplicon DNA Experimental R11G1.3 Protein containing glutathione S-transferase N- and C-terminal domains, has moderate similarity to prostaglandin D2 synthase (human PGDS), which is a prostaglandin D synthase and glutathione S-transferase that regulates non-rapid eye movement sleep gene DNA 1
469 1 1 1 19 B0334.8 Caenorhabditis elegans PCR_amplicon DNA Experimental B0334.8 Signal transduction protein of the phosphatidylinositol-3-OH kinase (PI(3)K) family; involved in control of multiple processes including dauer larva formation, longevity, fertility, thermotolerance, and adult motility age-1 daf-23 gene DNA 0
495 1 1 1 20 C18D11.1 Caenorhabditis elegans PCR_amplicon DNA Experimental C18D11.1 Protein of unknown function gene DNA 0

Total number of rows: 21504

Table truncated, full table size 4121 Kbytes.




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