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Platform GPL7065 Query DataSets for GPL7065
Status Public on Jul 29, 2008
Title Print_501
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Caenorhabditis elegans
Manufacturer Stanford Functional Genomics Facility, Stanford School of Medicine
Manufacture protocol Material is transferred from microtiter plate wells to the slide surface by an automated print head
Support glass
 
 
Submission date Jul 18, 2008
Last update date Jul 29, 2008
Contact name Stuart Kim
E-mail(s) kim@cmgm.stanford.edu
Phone 650-725-7671
Fax 650-725-7739
Organization name Stanford University Medical Center
Department Department of Developmental Biology
Street address -
City Stanford
State/province CA
ZIP/Postal code 94305-5307
Country USA
 
Samples (5) GSM306253, GSM306255, GSM306269, GSM306274, GSM306281
Series (3)
GSE12094 Aging study
GSE12166 TJ411(fer-15(b26)II; age-1(hx542)II) vs. BA713(fer-15(b26)II)
GSE12167 TJ1081)fer-15(b26)II; daf-16(m26)I) vs. BA713(fer-15(b26)II)

Data table header descriptions
ID
MetaColumn
MetaRow
Column
Row
ORF
Reporter Species
Repoter Biosequence Type
Repoter BioSequence PolymerType
Reporter Group[role]
Reporter ControlType
CompositeSequence Name
CompositeSequence BioSequence [Description]
CompositeSequence BioSequence [Gene Symbol]
CompositeSequence BioSequence [Gene Alias]
CompositeSequence Biosequence Type
CompositeSequence BioSequence PolymerType
Failed
SPOT_ID

Data table
ID MetaColumn MetaRow Column Row ORF Reporter Species Repoter Biosequence Type Repoter BioSequence PolymerType Reporter Group[role] Reporter ControlType CompositeSequence Name CompositeSequence BioSequence [Description] CompositeSequence BioSequence [Gene Symbol] CompositeSequence BioSequence [Gene Alias] CompositeSequence Biosequence Type CompositeSequence BioSequence PolymerType Failed SPOT_ID
1 1 1 1 1 AC3.5 Caenorhabditis elegans PCR_amplicon DNA Experimental AC3.5 glutamyl aminopeptidase gene DNA 0
2 1 1 2 1 AC3.8 Caenorhabditis elegans PCR_amplicon DNA Experimental AC3.8 UDP-glucuronosyltransferase gene DNA 0
3 1 1 3 1 AH6.6 Caenorhabditis elegans PCR_amplicon DNA Experimental AH6.6 Member of the 7TM receptor protein family sra-2 gene DNA 0
4 1 1 4 1 B0001.3 Caenorhabditis elegans PCR_amplicon DNA Experimental B0001.3 Protein with moderate similarity to C. elegans B0001.5 gene product gene DNA 0
5 1 1 5 1 B0024.1 Caenorhabditis elegans PCR_amplicon DNA Experimental B0024.1 "Protein containing two collagen triple helix repeats, which are found in some extracellular proteins, and a nematode cuticle collagen N-terminal domain, has moderate similarity to a region of C. elegans BLI-1 " gene DNA 0
6 1 1 6 1 B0024.4 Caenorhabditis elegans PCR_amplicon DNA Experimental B0024.4 "Protein of unknown function, has moderate similarity to uncharacterized C. elegans ZK6.10 " gene DNA 1
7 1 1 7 1 C06H5.1 Caenorhabditis elegans PCR_amplicon DNA Experimental C06H5.1 "Protein containing an F-box domain, which serve as a link between a target protein and a ubiquitin-conjugating enzyme, and a DUF38 domain of unknown function, has weak similarity to C. elegans FOG-2, which is required for the sexual identity of germ cells " gene DNA 0
8 1 1 8 1 C07A9.5 Caenorhabditis elegans PCR_amplicon DNA Experimental C07A9.5 "Protein containing an EF hand domain, which are found in signaling, buffering or transport proteins, has weak similarity to a region of alpha actinin 2 (mouse Actn2), which may play a role in muscle cell fusion " gene DNA 0
9 1 1 9 1 C07G2.1 Caenorhabditis elegans PCR_amplicon DNA Experimental C07G2.1 "Protein containing three chitin binding peritrophin-A domains, which contain six conserved cysteines that probably form three disulfide bridges " cej-1 gene DNA 0
10 1 1 10 1 C08B6.4 Caenorhabditis elegans PCR_amplicon DNA Experimental C08B6.4 "Member of the plant chitinase class I family, which hydrolyze the beta-1,4-N-acetyl-D-glucosamine bonds in chitin polymers destroying chitin-containing cell walls of pathogens, has strong similarity to uncharacterized C. elegans R10D12.15 " gene DNA 0
11 1 1 11 1 C08H9.2 Caenorhabditis elegans PCR_amplicon DNA Experimental C08H9.2 "Protein containing 14 KH domains, which may bind RNA, has moderate similarity to high density lipoprotein binding protein (human HDLBP), which binds high density lipoproteins, mRNA and tRNA, and is involved in mRNA stability " gene DNA 0
12 1 1 12 1 C08H9.7 Caenorhabditis elegans PCR_amplicon DNA Experimental C08H9.7 "Member of the glycosyl hydrolase 18 family, has a region of weak similarity to a region of chitinase 1 (chitotriosidase, human CHIT1), which catalyzes the hydrolysis of chitin and is elevated in patients with Gaucher disease " gene DNA 0
13 1 1 13 1 F53C11.4 Caenorhabditis elegans PCR_amplicon DNA Experimental F53C11.4 Protein of unknown function gene DNA 0
14 1 1 14 1 F53F1.11 Caenorhabditis elegans PCR_amplicon DNA Experimental F53F1.11 "Member of the 7-transmembrane chemoreceptor family of G protein-coupled receptors (GPCR), has strong similarity to uncharacterized C. elegans Y38A10A.1 " gene DNA 0
15 1 1 15 1 F53F4.8 Caenorhabditis elegans PCR_amplicon DNA Experimental F53F4.8 "Member of the glycosyl hydrolases family 31, which are involved in carbohydrate metabolism, contains a P-type trefoil domain, has low similarity to lysosomal acid alpha-glucosidase (human GAA), which acts in glycogen catabolism " gene DNA 0
16 1 1 16 1 F53H4.1 Caenorhabditis elegans PCR_amplicon DNA Experimental F53H4.1 "Protein containing two SNF2 related N-terminal domains and a helicase conserved C-terminal domain, has a region of low similarity to a region of Cockayne's syndrome complementation group B (human ERCC6), which is a transcription-coupled DNA repair protein " gene DNA 1
17 1 1 17 1 F54B3.3 Caenorhabditis elegans PCR_amplicon DNA Experimental F54B3.3 "Member of the ATPase family associated with various cellular activities, has weak similarity to S. cerevisiae Rpt5p, which is an ATPase component of 26S proteasome complex that functions in RNA polymerase II transcription elongation " gene DNA 0
18 1 1 18 1 F54B11.7 Caenorhabditis elegans PCR_amplicon DNA Experimental F54B11.7 Protein with strong similarity to C. elegans T23B12.10 gene product gene DNA 0
19 1 1 19 1 K01A6.1 Caenorhabditis elegans PCR_amplicon DNA Experimental K01A6.1 "Protein containing five PDZ, DHR, or GLGF domains, which are found in signaling proteins, and two WW domains, has low similarity to activin receptor-interacting protein 1 (mouse Acvrip1), which inhibits activin-induced transcriptional activity " gene DNA 0
20 1 1 20 1 K01C8.3 Caenorhabditis elegans PCR_amplicon DNA Experimental K01C8.3 "Protein containing two pyridoxal-dependent group II decarboxylase conserved domains, which bind pyridoxal-phosphate groups, has a region of high similarity to dopa decarboxylase (aromatic L-amino acid decarboxylase, mouse Ddc) " gene DNA 0

Total number of rows: 21504

Table truncated, full table size 4157 Kbytes.




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