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Platform GPL6919 Query DataSets for GPL6919
Status Public on Nov 20, 2008
Title Identification of targets of the protein disulfide reductase thioredoxin
Technology type MS
Distribution virtual
Organism Hordeum vulgare
 
 
Submission date Jun 03, 2008
Last update date Nov 20, 2008
Contact name Per Hagglund
E-mail(s) ph@bio.dtu.dk
Phone +4545252786
Organization name Technical University of Denmark
Department Department of Systems Biology
Lab Enzyme and Protein Chemistry
Street address Soltofts plads
City Kgs Lyngby
ZIP/Postal code DK-2800
Country Denmark
 
Samples (2) GSM296164, GSM296167
Series (1)
GSE11650 Identification of targets of the protein disulfide reductase thioredoxin

Data table header descriptions
ID Peptide sequence
DB Source The database version used
SP_ACC Protein accession matching identified peptides. If accessions from different organisms match the same set of peptides, the phylogenetically most closely related to Hordeum vulgare is listed here
PT_GI
SPOT_ID
GB_ACC
Other matched accessions Other accessions matching the same set of peptides
Description The name of the protein as it appears in Swiss-Prot or NCBInr entries. For HvGi entries protein names and accession numbers are from homologous NCBInr entires

Data table
ID DB Source SP_ACC PT_GI SPOT_ID GB_ACC Other matched accessions Description
AADNQLFVATCAPAR NCBInr downloaded on 20071206 115451067 Os03g0175600 [Oryza sativa (japonica cultivar-group)]
AAIGLSEHGFNTACITK Swiss-Prot 54.6 DHSA_ORYSJ DHSA1_ARATH; DHSA2_ARATH "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor - Oryza sativa subsp. japonica (Rice)"
AAVGHPDTLGDCPFSQR NCBInr downloaded on 20071206 28192421 gi|115461741; gi|6939839 dehydroascorbate reductase [Triticum aestivum]
ACEDLIFNHLR NCBInr downloaded on 20071206 108709565 gi|115453947 "Inositol monophosphatase 3, putative, expressed [Oryza sativa (japonica cultivar-group)]"
ACGAVIVNRPEELQESDVGTR NCBInr downloaded on 20071206 115468394 gi|125555633; gi|125597471 Os06g0538000 [Oryza sativa (japonica cultivar-group)]
ACYGVLR Swiss-Prot 54.6 RS31_ARATH RS32_ARATH; RS33_ARATH 40S ribosomal protein S3-1 - Arabidopsis thaliana (Mouse-ear cress)
ADEGYCLSVR HvGI release 9.0 TC131032 BI958900; TC130742 Putative r40c1 protein - rice [Oryza sativa (japonica cultivar-group)]/ gi:24899397
AFDLLHEGGCLR Swiss-Prot 54.6 ADHX_ORYSI ADHX_ORYSJ Alcohol dehydrogenase class-3 - Oryza sativa subsp. indica (Rice)
AFQDCINHYGSDISK HvGI release 9.0 TC139075 TC139076; BM816339; BM816340 Os03g0685500 [Oryza sativa (japonica cultivar-group)]/ gi:115454651
AGCGNSFAPFPK HvGI release 9.0 TC131959 aluminum-induced protein-like protein [Setaria italica]/ gi:124263781
AGQGAFGNMCR Swiss-Prot 54.6 RL4_PRUAR 60S ribosomal protein L4 - Prunus armeniaca (Apricot)
AIFTEGCK Swiss-Prot 54.6 CH61_MAIZE CH62_MAIZE "Chaperonin CPN60-1, mitochondrial precursor - Zea mays (Maize)"
ALALPGVCR HvGI release 9.0 BM096857 Os05g0489200 [Oryza sativa (japonica cultivar-group)]/ gi:115464583
ALCAEHNVHLVTVPSAK Swiss-Prot 54.6 RS12_HORVU 40S ribosomal protein S12 - Hordeum vulgare (Barley)
ALEIVPCDIHQR HvGI release 9.0 TC131623 "fructose-1,6-bisphosphatase 2 [Oryza sativa (japonica cultivar-group)]/ gi:115336282"
ALIAAEYCGVK HvGI release 9.0 TC146710 BJ470470 Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2)/ gi:90101285
ALSGDLGYEENCR NCBInr downloaded on 20071206 7431022 glucose and ribitol dehydrogenase homolog - barley
APGGGCCTGVR NCBInr downloaded on 20071206 55275991 non-specific lipid transfer protein 6 [Hordeum vulgare subsp. vulgare]
ASCISFK HvGI release 9.0 TC130945 reversibly glycosylated polypeptide [Triticum aestivum]/ gi:4158232
ASLECLAPR HvGI release 9.0 TC148225 "oxidoreductase, zinc-binding dehydrogenase family protein, expressed [Oryza sativa (japonica cultivar-group)]/ gi:108705686"

Total number of rows: 210

Table truncated, full table size 27 Kbytes.




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Supplementary data files not provided
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