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Platform GPL6864 Query DataSets for GPL6864
Status Public on Jun 15, 2008
Title Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Oryza sativa
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at
Catalog number 015241
Description *** A different version of this platform with the Agilent Probe names in the ID column is assigned accession number GPL8852.
Submission date May 15, 2008
Last update date Dec 06, 2012
Organization Agilent Technologies
Phone 877-424-4536
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
Samples (2523) GSM288879, GSM288881, GSM288884, GSM288887, GSM368904, GSM368905 
Series (118)
GSE11451 OsGLK1 regulated genes in rice
GSE14778 Gene expression profiling of rice seedling with 2-azahypoxanthine
GSE15021 Microarray analysis of strain EG4 vs. Nipponbare
Alternative to GPL8852

Data table header descriptions
GB_ACC GenBank accession
ORF ORF identifier
miRNA_ID Sanger miRBase identifier
Accessions Global accession number for the probe
SEQUENCE Probe sequence
ProbeUID Probe unique identifier
ProbeName Name of the probe
Description Description of the gene

Data table
ID GB_ACC ORF miRNA_ID Accessions SEQUENCE ProbeUID ControlType ProbeName GeneName Description SPOT_ID
1 0 1 GE_BrightCorner GE_BrightCorner --GE_BrightCorner
2 1 1 DarkCorner DarkCorner --DarkCorner
3 1 1 DarkCorner DarkCorner --DarkCorner
4 1 1 DarkCorner DarkCorner --DarkCorner
5 1 1 DarkCorner DarkCorner --DarkCorner
6 1 1 DarkCorner DarkCorner --DarkCorner
7 1 1 DarkCorner DarkCorner --DarkCorner
8 1 1 DarkCorner DarkCorner --DarkCorner
9 1 1 DarkCorner DarkCorner --DarkCorner
10 1 1 DarkCorner DarkCorner --DarkCorner
11 1 1 DarkCorner DarkCorner --DarkCorner
13 CI557169 Os01g0721700|CI557169|NA|CI557169 GCCCCTTTATATCTTTGTAGTTTGTAATAAGCCTGCTAAATTCTCAATGTTCATGTGTTC 5 0 Os01g0721700|COMBINER_EST|CI557169|4 COMBINER_EST Conserved hypothetical protein.
14 AK104039 Os06g0215600|AK104039|NA|AK104039 GATATTTGATTAGTTATGCATCCAAATATATTGGGATTAATAAACGCAGATGTATTCACA 7 0 Os06g0215600|mRNA|AK104039|CDS+3'UTR mRNA Oxo-phytodienoic acid reductase (12-oxophytodienoic acid reductase).
15 AK069390 Os09g0379500|AK069390|NA|AK069390 GAAATTAGAATGGGCGACAAATTTAGGGACCTCAAGTAAACTTATTCCAAGGCAAAAACA 9 0 Os09g0379500|mRNA|AK069390|CDS+3'UTR mRNA Conserved hypothetical protein.
16 AK069890 Os03g0199100|AK069890|NA|AK069890 ATTACTGACTTTATTTATCACCTGTCCTGATCTCCATAGTTTATCAATGTGTTTGGCGTT 11 0 Os03g0199100|mRNA|AK069890|CDS+3'UTR mRNA Protein of unknown function DUF677 family protein.
17 AK120501 Os01g0508500|AK120501|NA|AK120501 ATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAG 13 0 Os01g0508500|mRNA|AK120501|CDS+3'UTR mRNA Hypothetical protein.
18 AK064427 Os06g0130000|AK064427|NA|AK064427 TGGACGTTTACTCATCCGCATGGCCCATTTAGCGCCCCCATTTGCGATTTTTCGCAGCAT 15 0 Os06g0130000|mRNA|AK064427|CDS+3'UTR mRNA Tobacco mosaic virus helicase domain-binding protein (Fragment).
19 AK102368 Os08g0446400|AK102368|NA|AK102368 ACTGCCCAACTTTGAGACGAGTAATTCTCAACCAAAATAATCTCATTGGATCAATTCCAC 17 0 Os08g0446400|mRNA|AK102368|5'UTR+CDS mRNA Leucine-rich repeat, plant specific containing protein.
20 Os05g0433800 Os05g0433800|Os05g0433800|NA|Os05g0433800 ATCACAGCTCACATCTCTGTCGTGATCGCCACAGTTCAATCCACCAACAAATCAACAATC 19 0 Os05g0433800|COMBINER_EST|Os05g0433800|8 COMBINER_EST Protein of unknown function DUF1218 family protein.

Total number of rows: 45220

Table truncated, full table size 8813 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL6864_old_annotations.txt.gz 2.6 Mb (ftp)(http) TXT

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