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Platform GPL3992 Query DataSets for GPL3992
Status Public on Jul 12, 2006
Title Functional ID v2.0 Array 1
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Homo sapiens
Manufacturer Rosetta/Merck
Manufacture protocol see manufacturer's website
Web link
Contributor(s) Kulkarni AV, Castle J
Submission date Jul 10, 2006
Last update date Jul 12, 2006
Contact name Julja Burchard
Organization name Merck & Co., Inc.
Department Computational & Systems Biology
Street address 33 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02176
Country USA
Samples (140) GSM119707, GSM119708, GSM119709, GSM119710, GSM119741, GSM119742 
Series (5)
GSE5291 Designing siRNA that distinguish between genes that differ by a single nucleotide
GSE5769 Position-specific chemical modification of siRNAs reduces "off-target" transcript silencing
GSE5814 Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity

Data table header descriptions
SEQUENCE_ID Identifier of sequence associated with the gene represented
ORF Gene symbol from Entrez Gene
GB_ACC GenBank accession number associated with the gene represented

Data table
10023813711 AL137345 SMYD4 AL137345
10023809958 NM_018481 BRCTD1 NM_018481
10023826662 NM_000359 TGM1 NM_000359
10023805461 Contig10429 LRRK2
10023818350 AB005216 SOCS7 AB005216
10023816735 NM_003528 HIST2H2BE NM_003528
10023820931 Contig61112 Contig61112
10023819626 NM_004932 CDH6 NM_004932
10023816390 AL117611 AL117611
10023818230 NM_005016 PCBP2 NM_005016
10023811924 Contig31577 ZNF507
10023818130 Contig34742 SPTA1
10023826209 Contig46697 Contig46697
10023826622 AJ225028 GABBR1 AJ225028
10023816023 AL096857 BAT2D1 AL096857
10023809649 Contig42488 RNF165
10023807735 Contig61265 Contig61265
10023825456 NM_001996 FBLN1 NM_001996
10023819509 NM_019023 PRMT7 NM_019023
10023811867 AL096738 TRPC4AP AL096738

Total number of rows: 23574

Table truncated, full table size 850 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL3992_feature_ids_locations.txt.gz 177.6 Kb (ftp)(http) TXT

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