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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 11, 2006 |
| Title |
Malaria Oligo p19 |
| Technology type |
spotted oligonucleotide |
| Distribution |
non-commercial |
| Organisms |
Saccharomyces cerevisiae; Plasmodium falciparum |
| Manufacturer |
DeRisi lab |
| Manufacture protocol |
As described at http://derisilab.ucsf.edu
|
| Support |
glass |
| Coating |
poly-lysine |
| |
|
| Description |
Plasmodium falciparum coding specific 70mer oligonucleotides designed by ArrayOligoSelector
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| Web link |
http://derisilab.ucsf.edu
|
| Submission date |
Jul 07, 2006 |
| Last update date |
Jul 11, 2006 |
| Contact name |
Joseph L DeRisi |
| E-mail(s) |
joe@derisilab.ucsf.edu
|
| Organization name |
University of California San Francisco
|
| Department |
Biochemistry and Biophysics
|
| Lab |
DeRisi Lab
|
| Street address |
1700 4th St.
|
| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94158-2330 |
| Country |
USA |
| |
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| Samples (128)
|
GSM119430, GSM119431, GSM119432, GSM119433, GSM119434, GSM119435
GSM119436, GSM119437, GSM119438, GSM119439, GSM119440, GSM119441, GSM119442, GSM119443, GSM119444, GSM119445, GSM119446, GSM119447, GSM119448, GSM119449, GSM119450, GSM119451, GSM119452, GSM119453, GSM200856, GSM200857, GSM200858, GSM200859, GSM200860, GSM200861, GSM200862, GSM200863, GSM200864, GSM200865, GSM200866, GSM200867, GSM200868, GSM200869, GSM200870, GSM200871, GSM200872, GSM200873, GSM200874, GSM200875, GSM200876, GSM200877, GSM200878, GSM200879, GSM200880, GSM200881, GSM200882, GSM200883, GSM200884, GSM200885, GSM200886, GSM200887, GSM200888, GSM200889, GSM200890, GSM200891, GSM200892, GSM200893, GSM200894, GSM200895, GSM200896, GSM200897, GSM200898, GSM200899, GSM200900, GSM200901, GSM200902, GSM200903, GSM200904, GSM200905, GSM200906, GSM200907, GSM200908, GSM200909, GSM200910, GSM200911, GSM200912, GSM200913, GSM200914, GSM200915, GSM200916, GSM200917, GSM200918, GSM200919, GSM200920, GSM200921, GSM200922, GSM200923, GSM200924, GSM200925, GSM200926, GSM200927, GSM200928, GSM200929, GSM200930, GSM200931, GSM200932, GSM200933, GSM200934, GSM200935, GSM200936, GSM200937, GSM200938, GSM200939, GSM200940, GSM200941, GSM200942, GSM200943, GSM200944, GSM200945, GSM200946, GSM200947, GSM200948, GSM200949, GSM200950, GSM200951, GSM200952, GSM200953, GSM200954, GSM200955, GSM200956, GSM200957, GSM200958, GSM200959
|
| Series (2) |
| GSE5267 |
Tetracyclines Specifically Target the Apicoplast of the Malaria Parasite Plasmodium falciparum |
| GSE8099 |
Whole genome analysis of mRNA decay in P. falciparum reveals a lengthening of mRNA half-life during the IDC |
|
| Data table header descriptions |
| ID |
|
| ORF |
The plasmodb_id(s) for Plasmodium falciparum spots, otherwise the yeast identifier. |
| ORGANISM |
The species of the oligo |
| SEQUENCE |
Sequence of oligonucleotide probe |
| SPOT_ID |
|
| Data table |
| ID |
ORF |
ORGANISM |
SEQUENCE |
SPOT_ID |
| Y_IBX1991_1 |
IBX1991 |
Saccharomyces cerevisiae |
AAGGTGGTTCCTATTTCTTTATAACTTTTACACATTGTGAAGAATAACAATTCTGCTTACTATTGTCATT |
|
| Y_ICX1881_1 |
ICX1881 |
Saccharomyces cerevisiae |
CTCATTTCTTTACCTTACTGTCCATTTAATGCTAGAAAACTTCCGAATATTGTATTATTATTACCCGGAT |
|
| Y_IFX1541_1 |
IFX1541 |
Saccharomyces cerevisiae |
AGGGGAAATAAATTGGAAGCATTGAAGTTGTTGGAATGAAACTCTAAAATATCATCTGTTTAGTAGTATC |
|
| Y_IHX3161_1 |
IHX3161 |
Saccharomyces cerevisiae |
GTTATCACTTTCACCCAGATTTATTATCTTTGTATCGTATTGTTTCTTGAGTGTTGTTATGATTTTCTTA |
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| EMPTY_1 |
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-- EMPTY |
| EMPTY_2 |
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|
|
-- EMPTY |
| EMPTY_3 |
|
|
|
-- EMPTY |
| EMPTY_4 |
|
|
|
-- EMPTY |
| EMPTY_5 |
|
|
|
-- EMPTY |
| EMPTY_6 |
|
|
|
-- EMPTY |
| EMPTY_7 |
|
|
|
-- EMPTY |
| EMPTY_8 |
|
|
|
-- EMPTY |
| EMPTY_9 |
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|
|
-- EMPTY |
| EMPTY_10 |
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|
|
-- EMPTY |
| EMPTY_11 |
|
|
|
-- EMPTY |
| EMPTY_12 |
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|
|
-- EMPTY |
| EMPTY_13 |
|
|
|
-- EMPTY |
| EMPTY_14 |
|
|
|
-- EMPTY |
| EMPTY_15 |
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|
|
-- EMPTY |
| EMPTY_16 |
|
|
|
-- EMPTY |
Total number of rows: 8832
Table truncated, full table size 926 Kbytes.
| Supplementary data files not provided |
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