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Platform GPL3921 Query DataSets for GPL3921
Status Public on Jun 26, 2006
Title [HT_HG-U133A] Affymetrix HT Human Genome U133A Array
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
Catalog number 520276
 
Description Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

The GeneChip® HT Human Genome U133 Array Plate Set enables researchers to perform large-scale studies by analyzing whole-genome expression for up to 96 samples at a time. The set comprises a U133A and U133B plate, measuring expression levels for more than 33,000 well-characterized genes and UniGene clusters.

Keywords = high density oligonucleotide array
 
Web link http://www.affymetrix.com/products_services/arrays/specific/ht_hgu_133_ap.affx
http://www.affymetrix.com/analysis/index.affx
Submission date Jun 26, 2006
Last update date Jan 17, 2017
Organization Affymetrix, Inc.
E-mail geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone 888-362-2447
URL http://www.affymetrix.com/index.affx
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (6729) GSM119066, GSM119067, GSM119068, GSM119069, GSM119070, GSM119071 
Series (78)
GSE5258 Connectivity Map dataset (build01)
GSE5417 Expression data of control-shRNA and SATB1-shRNA expressing MDA-MB-231 cells from 2D and 3D culture system
GSE5505 LNCaP cells treated with celastrol or vehicle for 6h
Relations
Alternative to GPL15395
Alternative to GPL16980
Alternative to GPL17897
Alternative to GPL18283 (Alternative CDF [AffyProbeMine])
Alternative to GPL22931 (alternative)

Data table header descriptions
ID Affymetrix Probe Set ID
GB_ACC GenBank Accession Number
SPOT_ID Identifies controls
Species Scientific Name The genus and species of the organism represented by the probe set.
Annotation Date The date that the annotations for this probe array were last updated. It will generally be earlier than the date when the annotations were posted on the Affymetrix web site.
Sequence Type Indicates whether the sequence is an Exemplar, Consensus or Control sequence. An Exemplar is a single nucleotide sequence taken directly from a public database. This sequence could be an mRNA or EST. A Consensus sequence, is a nucleotide sequence assembled by Affymetrix, based on one or more sequence taken from a public database.
Sequence Source
Target Description
Representative Public ID The accession number of a representative sequence. Note that for consensus-based probe sets, the representative sequence is only one of several sequences (sequence sub-clusters) used to build the consensus sequence and it is not directly used to derive the probe sequences. The representative sequence is chosen during array design as a sequence that is best associated with the transcribed region being interrogated by the probe set. Refer to the "Sequence Source" field to determine the database used.
Gene Title Title of Gene represented by the probe set.
Gene Symbol A gene symbol, when one is available (from UniGene).
ENTREZ_GENE_ID Entrez Gene Database UID
RefSeq Transcript ID References to multiple sequences in RefSeq. The field contains the ID and Description for each entry, and there can be multiple entries per ProbeSet.
Gene Ontology Biological Process Gene Ontology Consortium Biological Process derived from LocusLink. Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
Gene Ontology Cellular Component Gene Ontology Consortium Cellular Component derived from LocusLink. Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
Gene Ontology Molecular Function Gene Ontology Consortium Molecular Function derived from LocusLink. Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".

Data table
ID GB_ACC SPOT_ID Species Scientific Name Annotation Date Sequence Type Sequence Source Target Description Representative Public ID Gene Title Gene Symbol ENTREZ_GENE_ID RefSeq Transcript ID Gene Ontology Biological Process Gene Ontology Cellular Component Gene Ontology Molecular Function
1007_s_at U48705 Homo sapiens Mar 8, 2007 Exemplar sequence U48705 /FEATURE=mRNA /DEFINITION=HSU48705 Human receptor tyrosine kinase DDR gene, complete cds U48705 discoidin domain receptor family, member 1 DDR1 780 NM_001954 /// NM_013993 /// NM_013994 0006468 // protein amino acid phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein-tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation
1053_at M87338 Homo sapiens Mar 8, 2007 Exemplar sequence M87338 /FEATURE= /DEFINITION=HUMA1SBU Human replication factor C, 40-kDa subunit (A1) mRNA, complete cds M87338 replication factor C (activator 1) 2, 40kDa RFC2 5982 NM_002914 /// NM_181471 0006260 // DNA replication // inferred from electronic annotation 0005634 // nucleus // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation
117_at X51757 Homo sapiens Mar 8, 2007 Exemplar sequence X51757 /FEATURE=cds /DEFINITION=HSP70B Human heat-shock protein HSP70B' gene X51757 heat shock 70kDa protein 6 (HSP70B') HSPA6 3310 NM_002155 /// XM_001134322 0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation
121_at X69699 Homo sapiens Mar 8, 2007 Exemplar sequence X69699 /FEATURE= /DEFINITION=HSPAX8A H.sapiens Pax8 mRNA X69699 paired box gene 8 PAX8 7849 NM_003466 /// NM_013951 /// NM_013952 /// NM_013953 /// NM_013992 0001656 // metanephros development // inferred from electronic annotation /// 0006183 // GTP biosynthesis // inferred from electronic annotation /// 0006228 // UTP biosynthesis // inferred from electronic annotation /// 0006241 // CTP biosynthesis // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // development // inferred from electronic annotation /// 0009653 // morphogenesis // traceable author statement 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation 0003700 // transcription factor activity // traceable author statement /// 0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0004996 // thyroid-stimulating hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016563 // transcriptional activator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation
1255_g_at L36861 Homo sapiens Mar 8, 2007 Exemplar sequence L36861 /FEATURE=expanded_cds /DEFINITION=HUMGCAPB Homo sapiens guanylate cyclase activating protein (GCAP) gene exons 1-4, complete cds L36861 guanylate cyclase activator 1A (retina) GUCA1A 2978 NM_000409 0007165 // signal transduction // non-traceable author statement /// 0007601 // visual perception // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation 0005509 // calcium ion binding // inferred from electronic annotation /// 0008048 // calcium sensitive guanylate cyclase activator activity // traceable author statement
1294_at L13852 Homo sapiens Mar 8, 2007 Exemplar sequence L13852 /FEATURE= /DEFINITION=HUME1URP Homo sapiens ubiquitin-activating enzyme E1 related protein mRNA, complete cds L13852 ubiquitin-activating enzyme E1-like UBE1L 7318 NM_003335 0006512 // ubiquitin cycle // inferred from electronic annotation /// 0006464 // protein modification // inferred from electronic annotation /// 0006464 // protein modification // non-traceable author statement 0000166 // nucleotide binding // inferred from electronic annotation /// 0004839 // ubiquitin activating enzyme activity // inferred from electronic annotation /// 0004840 // ubiquitin conjugating enzyme activity // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation /// 0019782 // ISG15 activating enzyme activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation
1316_at X55005 Homo sapiens Mar 8, 2007 Exemplar sequence X55005 /FEATURE=mRNA /DEFINITION=HSCERBAR Homo sapiens mRNA for thyroid hormone receptor alpha 1 THRA1, (c-erbA-1 gene) X55005 thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) THRA 7067 NM_003250 /// NM_199334 0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007582 // physiological process // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016481 // negative regulation of transcription // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement 0003700 // transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004887 // thyroid hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016564 // transcriptional repressor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // transcription factor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-dependent nuclear receptor activity // inferred from electronic annotation /// 0004887 // thyroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004879 // ligand-dependent nuclear receptor activity // traceable author statement
1320_at X79510 Homo sapiens Mar 8, 2007 Exemplar sequence X79510 /FEATURE=cds /DEFINITION=HSPTPD1 H.sapiens mRNA for protein-tyrosine-phosphatase D1 X79510 protein tyrosine phosphatase, non-receptor type 21 PTPN21 11099 NM_007039 0006470 // protein amino acid dephosphorylation // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006470 // protein amino acid dephosphorylation // inferred from electronic annotation 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation
1405_i_at M21121 Homo sapiens Mar 8, 2007 Exemplar sequence M21121 /FEATURE= /DEFINITION=HUMTCSM Human T cell-specific protein (RANTES) mRNA, complete cds M21121 chemokine (C-C motif) ligand 5 CCL5 6352 NM_002985 0006874 // calcium ion homeostasis // traceable author statement /// 0006887 // exocytosis // traceable author statement /// 0006928 // cell motility // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation 0004871 // signal transducer activity // traceable author statement /// 0008009 // chemokine activity // traceable author statement /// 0042056 // chemoattractant activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement
1431_at J02843 Homo sapiens Mar 8, 2007 Exemplar sequence J02843 /FEATURE=cds /DEFINITION=HUMCYPIIE Human cytochrome P450IIE1 (ethanol-inducible) gene, complete cds J02843 cytochrome P450, family 2, subfamily E, polypeptide 1 CYP2E1 1571 NM_000773 0006118 // electron transport // inferred from electronic annotation 0005615 // extracellular space // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050381 // unspecific monooxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0004497 // monooxygenase activity // traceable author statement
1438_at X75208 Homo sapiens Mar 8, 2007 Exemplar sequence X75208 /FEATURE=cds /DEFINITION=HSPTKR H.sapiens HEK2 mRNA for protein tyrosine kinase receptor X75208 EPH receptor B3 EPHB3 2049 NM_004443 0006468 // protein amino acid phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005005 // transmembrane-ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein-tyrosine kinase activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement
1487_at L38487 Homo sapiens Mar 8, 2007 Exemplar sequence L38487 /FEATURE=mRNA /DEFINITION=HUMHERRA1 Human estrogen receptor-related protein (hERRa1) mRNA, 3' end, partial cds L38487 estrogen-related receptor alpha ESRRA 2101 NM_004451 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation 0003700 // transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016439 // tRNA-pseudouridine synthase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-dependent nuclear receptor activity // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0004879 // ligand-dependent nuclear receptor activity // traceable author statement
1494_f_at M33318 Homo sapiens Mar 8, 2007 Exemplar sequence M33318 /FEATURE=mRNA /DEFINITION=HUMCPIIA3A Human cytochrome P450IIA3 (CYP2A3) mRNA, complete cds M33318 cytochrome P450, family 2, subfamily A, polypeptide 6 CYP2A6 1548 NM_000762 0006118 // electron transport // inferred from electronic annotation 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation 0005506 // iron ion binding // inferred from electronic annotation /// 0008389 // coumarin 7-hydroxylase activity // traceable author statement /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050381 // unspecific monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0004497 // monooxygenase activity // traceable author statement
1598_g_at L13720 Homo sapiens Mar 8, 2007 Exemplar sequence L13720 /FEATURE= /DEFINITION=HUMGAS Homo sapiens growth-arrest-specific protein (gas) mRNA, complete cds L13720 growth arrest-specific 6 GAS6 2621 NM_000820 0001558 // regulation of cell growth // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation 0005102 // receptor binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
160020_at Z48481 Homo sapiens Mar 8, 2007 Consensus sequence Z48481 /FEATURE=cds /DEFINITION=HSMMPM1 H.sapiens mRNA for membrane-type matrix metalloproteinase 1 /NOTE=replacement of probe set 1301_s_at Z48481 matrix metallopeptidase 14 (membrane-inserted) MMP14 4323 NM_004995 0000270 // peptidoglycan metabolism // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation 0005578 // extracellular matrix (sensu Metazoa) // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
1729_at L41690 Homo sapiens Mar 8, 2007 Exemplar sequence L41690 /FEATURE= /DEFINITION=HUMTRADD Homo sapiens TNF receptor-1 associated protein (TRADD) mRNA, 3' end of cds L41690 TNFRSF1A-associated via death domain TRADD 8717 NM_003789 /// NM_153425 0006917 // induction of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0042981 // regulation of apoptosis // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0006915 // apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation 0004871 // signal transducer activity // inferred from expression pattern /// 0042802 // identical protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation
1773_at L00635 Homo sapiens Mar 8, 2007 Exemplar sequence L00635 /FEATURE= /DEFINITION=HUMFPTB Human farnesyl-protein transferase beta-subunit mRNA, complete cds L00635 farnesyltransferase, CAAX box, beta FNTB 2342 NM_002028 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0018347 // protein amino acid farnesylation // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation 0005737 // cytoplasm // not recorded 0004311 // farnesyltranstransferase activity // inferred from electronic annotation /// 0004660 // protein farnesyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0004660 // protein farnesyltransferase activity // inferred from electronic annotation
177_at U38545 Homo sapiens Mar 8, 2007 Exemplar sequence U38545 /FEATURE= /DEFINITION=HSU38545 Human ARF-activated phosphatidylcholine-specific phospholipase D1a (hPLD1) mRNA, complete cds U38545 phospholipase D1, phosphatidylcholine-specific PLD1 5337 NM_002662 0006644 // phospholipid metabolism // not recorded /// 0006935 // chemotaxis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008152 // metabolism // inferred from electronic annotation /// 0016042 // lipid catabolism // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation 0004630 // phospholipase D activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035091 // phosphoinositide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from electronic annotation
179_at U38980 Homo sapiens Mar 8, 2007 Exemplar sequence U38980 /FEATURE= /DEFINITION=U38980 Human PMS2 related (hPMSR6) mRNA, complete cds U38980 postmeiotic segregation increased 2-like 11 PMS2L11 441263 BC015750 0006298 // mismatch repair // inferred from electronic annotation /// 0008150 // biological_process // 0005575 // cellular_component // 0000166 // nucleotide binding // inferred from electronic annotation /// 0003674 // molecular_function // /// 0005524 // ATP binding // inferred from electronic annotation
1861_at U66879 Homo sapiens Mar 8, 2007 Exemplar sequence U66879 /FEATURE= /DEFINITION=HSU66879 Human Bcl-2 binding component 6 (bbc6) mRNA, complete cds U66879 BCL2-antagonist of cell death BAD 572 NM_004322 /// NM_032989 0006007 // glucose catabolism // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0008632 // apoptotic program // traceable author statement /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042981 // regulation of apoptosis // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045582 // positive regulation of T cell differentiation // inferred from electronic annotation /// 0006915 // apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement 0005737 // cytoplasm // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // non-traceable author statement 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // non-traceable author statement /// 0005515 // protein binding // inferred from direct assay

Total number of rows: 22277

Table truncated, full table size 24813 Kbytes.






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