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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 06, 2022 |
| Title |
NextSeq 2000 (Caenorhabditis elegans) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Caenorhabditis elegans |
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| Submission date |
Jun 06, 2022 |
| Last update date |
Jun 06, 2022 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (919)
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GSM6215078, GSM6215079, GSM6215080, GSM6215081, GSM6215082, GSM6215083
GSM6215084, GSM6215085, GSM6215086, GSM6215087, GSM6215088, GSM6215089, GSM6215090, GSM6215091, GSM6215092, GSM6215093, GSM6215094, GSM6215095, GSM6215096, GSM6215097, GSM6215098, GSM6215099, GSM6215100, GSM6215101, GSM6215102, GSM6215103, GSM6215104, GSM6215105, GSM6215106, GSM6215107, GSM6215108, GSM6215109, GSM6215110, GSM6215111, GSM6215112, GSM6215113, GSM6215114, GSM6215115, GSM6215116, GSM6215117, GSM6215118, GSM6215119, GSM6215120, GSM6215121, GSM6215122, GSM6215123, GSM6215124, GSM6215125, GSM6215126, GSM6215127, GSM6215128, GSM6215129, GSM6215130, GSM6215131, GSM6215132, GSM6215133, GSM6215134, GSM6215135, GSM6215136, GSM6215137, GSM6280587, GSM6280588, GSM6280589, GSM6280590, GSM6280591, GSM6280592, GSM6280593, GSM6280594, GSM6280595, GSM6280596, GSM6280597, GSM6280598, GSM6280599, GSM6280600, GSM6280601, GSM6280602, GSM6280603, GSM6280604, GSM6280605, GSM6280606, GSM6280607, GSM6280608, GSM6280609, GSM6280610, GSM6280611, GSM6280612, GSM6280613, GSM6280614, GSM6280615, GSM6280616, GSM6280617, GSM6280618, GSM6280619, GSM6280620, GSM6280621, GSM6280622, GSM7181515, GSM7181516, GSM7181517, GSM7181518, GSM7181519, GSM7181520, GSM7181521, GSM7181522, GSM7181523, GSM7662619, GSM7662620, GSM7662621, GSM7662622, GSM7662623, GSM7662624, GSM7662625, GSM7662626, GSM7662627, GSM7662628, GSM7662629, GSM7662630, GSM7662631, GSM7662632, GSM7662633, GSM7662634, GSM7662635, GSM7662636, GSM7662637, GSM7662638, GSM7662639, GSM7821578, GSM7821579, GSM7821580, GSM7821581, GSM7821582, GSM7821583, GSM7821584, GSM7821585, GSM7821586, GSM7821587, GSM7821588, GSM7821589, GSM7838104, GSM7838105, GSM7838106, GSM7838107, GSM7838108, GSM7838109, GSM8029690, GSM8029691, GSM8029692, GSM8029693, GSM8029694, GSM8029695, GSM8029696, GSM8029697, GSM8029698, GSM8139055, GSM8139056, GSM8139057, GSM8139058, GSM8140769, GSM8140770, GSM8140771, GSM8140772, GSM8140773, GSM8140774, GSM8140775, GSM8140776, GSM8140777, GSM8140778, GSM8140779, GSM8140780, GSM8140781, GSM8140782, GSM8140783, GSM8140784, GSM8140785, GSM8140786, GSM8140787, GSM8140788, GSM8140789, GSM8140790, GSM8140791, GSM8140792, GSM8140793, GSM8140794, GSM8140795, GSM8140796, GSM8140797, GSM8140798, GSM8140799, GSM8140800, GSM8140801, GSM8140802, GSM8140803, GSM8140804, GSM8140805, GSM8140806, GSM8140807, GSM8140808, GSM8140809, GSM8140810, GSM8140811, GSM8140812, GSM8140813, GSM8140814, GSM8140815, GSM8140816, GSM8140817, GSM8140818, GSM8140819, GSM8145345, GSM8145346, GSM8145347, GSM8145348, GSM8145361, GSM8145362, GSM8145363, GSM8145364, GSM8156196, GSM8156197, GSM8156198, GSM8156199, GSM8156200, GSM8156201, GSM8170419, GSM8170420, GSM8170421, GSM8170422, GSM8170423, GSM8170424, GSM8170425, GSM8170426, GSM8196131, GSM8196132, GSM8196133, GSM8196134, GSM8196135, GSM8196136, GSM8196137, GSM8196138, GSM8198228, GSM8198229, GSM8198230, GSM8198231, GSM8198232, GSM8198233, GSM8198234, GSM8198235, GSM8198236, GSM8198237, GSM8198238, GSM8198239, GSM8372954, GSM8372955, GSM8372956, GSM8372957, GSM8372958, GSM8372959, GSM8372960, GSM8372961, GSM8372962, GSM8372963, GSM8372964, GSM8372965, GSM8424698, GSM8424699, GSM8424700, GSM8424701, GSM8424702, GSM8424703, GSM8424704, GSM8424705, GSM8424706, GSM8424707, GSM8424708, GSM8424709, GSM8424710, GSM8424711, GSM8424712, GSM8424713, GSM8424714, GSM8424715, GSM8424716, GSM8424717, GSM8424718, GSM8424719, GSM8424720, GSM8424721, GSM8424722, GSM8424723, GSM8424724, GSM8424725, GSM8424726, GSM8424727, GSM8424728, GSM8424729, GSM8424730, GSM8424731, GSM8424732, GSM8424733, GSM8424734, GSM8424735, GSM8424736, GSM8424737, GSM8465855, GSM8465856, GSM8465857, GSM8465858, GSM8465859, GSM8465860, GSM8465861, GSM8465862, GSM8465863, GSM8465864, GSM8465865, GSM8465866, GSM8465867, GSM8465868, GSM8465869, GSM8465870, GSM8465871, GSM8465872, GSM8480415, GSM8480416, GSM8480417, GSM8480418, GSM8480419, GSM8480420, GSM8480421, GSM8480422, GSM8480423, GSM8480424, GSM8480425, GSM8480426, GSM8482128, GSM8482129, GSM8482130, GSM8482131, GSM8482132, GSM8482133, GSM8482134, GSM8482135, GSM8482136, GSM8482137, GSM8482138, GSM8482139, GSM8482140, GSM8482141, GSM8482142, GSM8482143, GSM8482144, GSM8482145, GSM8482146, GSM8482147, GSM8482148, GSM8482149, GSM8482150, GSM8546931, GSM8546932, GSM8546933, GSM8546934, GSM8546935, GSM8546936, GSM8546937, GSM8546938, GSM8546939, GSM8546940, GSM8546941, GSM8546942, GSM8546943, GSM8546944, GSM8561042, GSM8561043, GSM8561044, GSM8561045, GSM8561046, GSM8561047, GSM8561048, GSM8561049, GSM8561050, GSM8561051, GSM8561052, GSM8561053, GSM8561054, GSM8561055, GSM8561056, GSM8561057, GSM8595180, GSM8595181, GSM8595182, GSM8595183, GSM8595184, GSM8595185, GSM8595186, GSM8595187, GSM8595188, GSM8595189, GSM8595190, GSM8595191, GSM8595192, GSM8595193, GSM8595194, GSM8595195, GSM8595202, GSM8595203, GSM8595204, GSM8595205, GSM8595206, GSM8595207, GSM8595208, GSM8595209, GSM8595210, GSM8595211, GSM8595212, GSM8595213, GSM8595214, GSM8595215, GSM8595216, GSM8595217, GSM8595218, GSM8595219, GSM8595220, GSM8595221, GSM8595222, GSM8595223, GSM8595224, GSM8595225, GSM8595226, GSM8595227, GSM8595228, GSM8595229, GSM8595230, GSM8595231, GSM8595232, GSM8595233, GSM8595234, GSM8595235, GSM8595236, GSM8595237, GSM8595238, GSM8595239, GSM8595240, GSM8595241, GSM8595242, GSM8595243, GSM8595244, GSM8595245, GSM8595246, GSM8595247, GSM8595248, GSM8595249, GSM8595250, GSM8595251, GSM8595252, GSM8595253, GSM8595254, GSM8595255, GSM8595256, GSM8595257, GSM8595258, GSM8595259, GSM8595260, GSM8595261, GSM8634251, GSM8634252, GSM8634253, GSM8634254, GSM8634255, GSM8634256, GSM8634257, GSM8634258, GSM8634259, GSM8634260, GSM8634261, GSM8634262, GSM8634263, GSM8634264, GSM8634265, GSM8668791, GSM8668792, GSM8668793, GSM8668794, GSM8668795, GSM8668796, GSM8668797, GSM8668798, GSM8668799, GSM8668800, GSM8668801, GSM8668802, GSM8668803, GSM8668804, GSM8668805, GSM8668806, GSM8668807, GSM8668808, GSM8668809, GSM8668810, GSM8668811, GSM8668812, GSM8668813, GSM8668814...
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| Series (46)
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| GSE205582 |
Physiological and transcriptomic effects of hexafluoropropylene oxide dimer acid in Caenorhabditis elegans during development |
| GSE207152 |
Krill oil protects dopaminergic neurons from age-related degeneration through temporal transcriptome rewiring and suppression of several hallmarks of aging |
| GSE222472 |
Genome-wide profiling reveals a dual role for histone H2A monoubiquitylation at Polycomb-repressed and enhancer chromatin [ChIP-seq] |
| GSE222475 |
Genome-wide profiling reveals a dual role for histone H2A monoubiquitylation at Polycomb-repressed and enhancer chromatin |
| GSE229022 |
Single nuclei gene expression profile for adult C. elegans and several longevity mutants |
| GSE229931 |
Three germline lncRNAs promote PUM protein condensation and germline differentiation |
| GSE239285 |
Germ granule association drives small RNA specificity for a nuclear Argonaute protein [CUT&Tag] |
| GSE239286 |
Germ granule association drives small RNA specificity for a nuclear Argonaute protein [mRNA-seq] |
| GSE239291 |
Germ granule association drives small RNA specificity for a nuclear Argonaute protein |
| GSE244602 |
A high-throughput screen identifies RNA Binding Proteins that affect fertility in C. elegans and reveals a functional relationship between ADR-2 and SQD-1 |
| GSE245181 |
Whole-genome analysis of transcription-coupled repair reveals novel transcription events in Caenorhabditis elegans |
| GSE261268 |
Characterization of the genes that were regulated by feeding nisin |
| GSE261340 |
Inheritance of miRNAs via Yolk Promotes Stress Resilience in Progeny [small RNA] |
| GSE261341 |
Inheritance of miRNAs via Yolk Promotes Stress Resilience in Progeny |
| GSE261493 |
Characterization of the genes that were regulated by feeding Lactiplantibacillus sp. MH-1 during the largval stages |
| GSE261495 |
Characterization of the genes that were regulated by feeding Lactiplantibacillus sp. MH-1 |
| GSE262025 |
Identification of chromatin at the nuclear periphery in EMS lineage of early C. elegans embryos |
| GSE262486 |
Genome-wide CPD repair maps of Caenorhabditis elegans |
| GSE263661 |
NAC controls nascent chain fate through tunnel sensing and chaperone action [Ribo] |
| GSE263769 |
The SSUP-72/PINN-1 module is required for efficient 3’end processing and coordinates developmental gene expression during exit from diapause in C. elegans [GROseq] |
| GSE273239 |
Nuclear Argonaute protein NRDE-3 switches small RNA binding partners during embryogenesis coincident with the formation of SIMR granules |
| GSE275118 |
An E2 ubiquitin conjugating enzyme links diubiquitinated H2B to H3K27M oncohistone function |
| GSE275586 |
Conditions for the co-existence of promoter and gene-body condensates |
| GSE275668 |
Overlapping and separable activities of BRA-2 and HIM-17 promote occurrence and regulation of pairing and synapsis during Caenorhabditis elegans meiosis |
| GSE278459 |
H3K9 methylation-independent activity for HPL-2/HP1 in heterochromatin foci, gene repression, and organogenesis |
| GSE279082 |
Protein sequence editing defines distinct and overlapping functions of SKN-1A/Nrf1 and SKN-1C/Nrf2. |
| GSE280347 |
(6-4)PP and CPD Damage-seq data for L1 stage wildtype, csb-1 and xpc-1 C.elegans |
| GSE280349 |
UV-induced (6-4)PP and CPD XR-seq data for L1 stage wildtype, csb-1 and xpc-1 C.elegans |
| GSE282009 |
A noncanonical Pol III-dependent, Microprocessor-independent biogenesis pathway generates a germline enriched miRNA family |
| GSE283649 |
Dynamic Control of Argonautes by a Rapidly Evolving Immunological Switch |
| GSE286246 |
The kinase GSK-3 alters the repertoire of RNA binding proteins present on lipid metabolism transcripts leading to altered expression in the C. elegans nervous system |
| GSE286247 |
The kinase GSK-3 alters the repertoire of RNA binding proteins present on lipid metabolism transcripts leading to altered expression in the C. elegans nervous system |
| GSE289739 |
In vivo pulse-chase in C. elegans reveals intestinal histone turnover changes upon starvation |
| GSE290404 |
Lysosomes signal through the epigenome to regulate longevity across generations [II] |
| GSE290488 |
Lysosomes signal through the epigenome to regulate longevity across generations [III] |
| GSE293058 |
BCL-11 enables adaptive stress responses to environmental challenges |
| GSE293787 |
HTZ-1/H2A.Z expression sustains transcriptional programs that regulate Caenorhabditis elegans lifespan |
| GSE299469 |
eIF4e Assembly into Germ Granules is Essential for its Repressive Function |
| GSE303062 |
The Dream and MEC Complexes reinforce SPR-5; MET-2 maternal reprogramming to maintain the Germline-Soma distinction [lin-35 RNAseq] |
| GSE303085 |
The Dream and MEC Complexes reinforce SPR-5; MET-2 maternal reprogramming to maintain the Germline-Soma distinction [mep-1 RNAseq] |
| GSE303817 |
A lncRNA drives developmentally-timed decay of all members an essential microRNA family |
| GSE304344 |
ChICseq analysis of active and repressive histone modifications in intestinal and non-intestinal C. elegans cells [ChIC-seq] |
| GSE310466 |
Intraspecific variation in the duration of epigenetic inheritance in wild isolates of C. elegans |
| GSE316932 |
AMPK mutant dauer transcriptome [RNA-seq daf2_aak_alg34] |
| GSE318525 |
Identification of specific binding sites of ADR-1 in vivo |
| GSE331410 |
Neuronal oversight of germline small RNAs prevents heat-induced sterility in lab-domesticated Caenorhabditis elegans |
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| Supplementary data files not provided |
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