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Platform GPL3095 Query DataSets for GPL3095
Status Public on Nov 19, 2005
Title Takara CyanoChip v.1.2
Technology type spotted DNA/cDNA
Distribution custom-commercial
Organism Synechocystis sp. PCC 6803
Manufacturer Takara
Manufacture protocol see manufacturer's web site
 
Description IntelliGene® Cyano CHIP Ver.1.2 is a product which is arrayed and immobilized with the DNA fragments of ORF (Open Reading Frame) derived from Synechocystis sp. PCC6803, a photosynthetic gram-negative bacterium on a slide glass. Approximately 2,891 DNA fragments are arrayed. Further detailed information about ORF name, Genetic symbol and Gene name in Array list can be obtained from CyanoBase (http://www.kazusa.or.jp/cyano/ index.html) in Kazusa DNA Research Institute.
 
Web link http://www.takara-bio.co.jp/
Submission date Nov 18, 2005
Last update date Nov 19, 2005
Contact name Franck Chauvat
E-mail(s) franck.chauvat@cea.fr
Phone 33 1 69 08 78 11
Organization name CEA Saclay
Department DSV/DBJC
Lab LSOC
Street address -
City Gif sur yvette CEDEX
ZIP/Postal code 91191
Country France
 
Samples (18) GSM84561, GSM84562, GSM84563, GSM84564, GSM84995, GSM84996 
Series (2)
GSE3682 Synechocystis PCC6803 time course responses to 50 µM cadmium
GSE3755 Synechocystis PCC6803 Stress Response

Data table header descriptions
ID
ORF Open reading frame, as described in Cyanobase (www.kazusa.or.jp/cyano/cyano.html)
Metarow number of subarray row
Metacolomn number of subarray column
Sub-Grid Row number of row within subarray
Sub-Grid Colomn number of column within subarray
description gene description

Data table
ID ORF Metarow Metacolomn Sub-Grid Row Sub-Grid Colomn description
1 slr0613 1 1 1 2
2 sll1214 1 1 1 3 phytochrome-regulated gene
3 sll1212 1 1 1 4 GDP-D-mannose dehydratase
4 sll1209 1 1 1 5 DNA ligase
5 slr1318 1 1 1 6 iron(III) dicitrate transport system permease prot
6 slr0257 1 1 1 7 carboxyl-terminal protease
7 sll0216 1 1 1 8 hypothetical protein
8 sll1326 1 1 1 9 ATP synthase a subunit
9 sll1324 1 1 1 10 ATP synthase subunit b
10 slr1413 1 1 1 11
11 slr1415 1 1 1 12
12 sll0938 1 1 1 13 aspartate transaminase
13 sll0934 1 1 1 15 carboxysome formation protein
14 sll0930 1 1 1 16
15 sll0926 1 1 1 17 hypothetical protein
16 slr0974 1 1 1 18 initiation factor IF-3
17 sll1291 1 1 1 19 regulatory components of sensory transduction syst
18 sll1289 1 1 1 20
19 slr1393 1 1 1 22 sensory transduction histidine kinase
20 slr1395 1 1 1 23

Total number of rows: 2845

Table truncated, full table size 104 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
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Supplementary data files not provided

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