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Platform GPL3095 Query DataSets for GPL3095
Status Public on Nov 19, 2005
Title Takara CyanoChip v.1.2
Technology type spotted DNA/cDNA
Distribution custom-commercial
Organism Synechocystis sp. PCC 6803
Manufacturer Takara
Manufacture protocol see manufacturer's web site
 
Description IntelliGene® Cyano CHIP Ver.1.2 is a product which is arrayed and immobilized with the DNA fragments of ORF (Open Reading Frame) derived from Synechocystis sp. PCC6803, a photosynthetic gram-negative bacterium on a slide glass. Approximately 2,891 DNA fragments are arrayed. Further detailed information about ORF name, Genetic symbol and Gene name in Array list can be obtained from CyanoBase (http://www.kazusa.or.jp/cyano/ index.html) in Kazusa DNA Research Institute.
 
Web link http://www.takara-bio.co.jp/
Submission date Nov 18, 2005
Last update date Nov 19, 2005
Contact name Franck Chauvat
E-mail franck.chauvat@cea.fr
Phone 33 1 69 08 78 11
Organization name CEA Saclay
Department DSV/DBJC
Lab LSOC
Street address -
City Gif sur yvette CEDEX
ZIP/Postal code 91191
Country France
 
Samples (18) GSM84561, GSM84562, GSM84563, GSM84564, GSM84995, GSM84996 
Series (2)
GSE3682 Synechocystis PCC6803 time course responses to 50 ┬ÁM cadmium
GSE3755 Synechocystis PCC6803 Stress Response

Data table header descriptions
ID
ORF Open reading frame, as described in Cyanobase (www.kazusa.or.jp/cyano/cyano.html)
Metarow number of subarray row
Metacolomn number of subarray column
Sub-Grid Row number of row within subarray
Sub-Grid Colomn number of column within subarray
description gene description

Data table
ID ORF Metarow Metacolomn Sub-Grid Row Sub-Grid Colomn description
1 slr0613 1 1 1 2
2 sll1214 1 1 1 3 phytochrome-regulated gene
3 sll1212 1 1 1 4 GDP-D-mannose dehydratase
4 sll1209 1 1 1 5 DNA ligase
5 slr1318 1 1 1 6 iron(III) dicitrate transport system permease prot
6 slr0257 1 1 1 7 carboxyl-terminal protease
7 sll0216 1 1 1 8 hypothetical protein
8 sll1326 1 1 1 9 ATP synthase a subunit
9 sll1324 1 1 1 10 ATP synthase subunit b
10 slr1413 1 1 1 11
11 slr1415 1 1 1 12
12 sll0938 1 1 1 13 aspartate transaminase
13 sll0934 1 1 1 15 carboxysome formation protein
14 sll0930 1 1 1 16
15 sll0926 1 1 1 17 hypothetical protein
16 slr0974 1 1 1 18 initiation factor IF-3
17 sll1291 1 1 1 19 regulatory components of sensory transduction syst
18 sll1289 1 1 1 20
19 slr1393 1 1 1 22 sensory transduction histidine kinase
20 slr1395 1 1 1 23

Total number of rows: 2845

Table truncated, full table size 104 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
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Supplementary data files not provided

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