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Platform GPL30882

Query DataSets for GPL30882

Status

Public on Oct 19, 2021

Title

NextSeq 1000 (Homo sapiens)

Technology type

high-throughput sequencing

Distribution

virtual

Organism

Homo sapiens

Submission date

Oct 19, 2021

Last update date

Oct 19, 2021

Contact name

GEO

Country

USA

Samples (1196)

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GSM5639510, GSM5639511, GSM5639512, GSM5639513, GSM5639514, GSM5639515

Series (86)

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GSE186159	Aberrant overexpression of HOTAIR inhibits abdominal adipogenesis through the epigenetic remodelling of genome-wide DNA methylation and transcription
GSE196919	FOXD2-dependent genome-wide maps in HCT116 cells [ChIP-seq]
GSE196920	FOXD2-dependent genome-wide maps in HCT116 cells [HiChIP-seq]

GSE196922	FOXD2-dependent genome-wide maps in HCT116 cells
GSE197252	Non-cell-autonomous regulation of interneuron specification mediated by extracellular vesicles
GSE211467	Inhibition of topoisomerase 1 and BRD4-mediated pause release selectively kills tumours by inducing readthrough transcription [ChIP-seq]
GSE211471	Inhibition of topoisomerase 1 and BRD4-mediated pause release selectively kills tumours by inducing readthrough transcription
GSE212138	CITE-seq ex vivo engineered human plasma cells
GSE213403	RNA Interacts with Topoisomerase I to Modulate its Catalytic Activity
GSE215836	RNA sequencing of patient derived xenograft sample AML-346, AML-356, AML-388 and AML-661 using prime-seq
GSE217753	DNA methylation insulates exons from CTCF loops with nuclear speckles (CUT&TAG)
GSE217760	DNA methylation insulates exons from CTCF loops with nuclear speckles
GSE218566	PerturbSci-Kinetics: Dissecting key regulators of transcriptome kinetics through scalable single-cell RNA profiling of pooled CRISPR screens
GSE220536	A single-cell proteomic and transcriptomic assay identifies genes related to polyfunctionality of CAR-T cells targeting GPC1 in pancreatic cancer
GSE220673	Neuronal Hyperactivity in Neurons Derived from Individuals with Grey Matter Heterotopia
GSE220680	Gene expression profiles of hiPSCs, hiPSC-drived neuroepithelial cells (NECs), and hiPSC-derived neural crest cells (NCCs).
GSE221070	Adapter CAR-T cells to counteract T cell exhaustion and enable flexible targeting in AML
GSE221411	Single-cell transcriptomic sequencing identifies the genes related to polyfunctionality of persistent CAR-T cells targeting B7-H3 (CD276) in mice bearing human neuroblastoma xenografts
GSE225130	ATAC sequencing of control siRNA and Zmiz1 siRNA treated Human dermal lymphatic endothelial cell (HDLECs)
GSE225715	A nucleosome switch primes Hepatitis B Virus infection [Mnase-Seq, ChIP-Seq]
GSE225716	A nucleosome switch primes Hepatitis B Virus infection
GSE225984	Novel TCR sequencing and cloning methods for sensitive and quantitative interrogation of repertoires and rapid isolation of tumor-reactive TCRs
GSE229042	SEC-seq human plasma cells in nanovials
GSE230810	A hybrid single cell demultiplexing strategy that increases both cell recovery rate and calling accuracy
GSE232303	TAD hierarchy restricts poised LTR activation and loss of TAD hierarchy promotes LTR co-option in cancer
GSE232550	Innate immune memory after brain injury drives inflammatory cardiac dysfunction II
GSE235027	Altered histone acetylation patterns in pancreatic cancer cell lines induce subtype-specific transcriptomic and phenotypic changes.
GSE236334	Tunable Hydrogel Viscoelasticity Modulates Human Neural Maturation
GSE244337	Genome-Scale Exon Perturbation Screens Uncover Critical Exons for Cell Fitness [CRISPR]
GSE244374	Genome-Scale Exon Perturbation Screens Uncover Critical Exons for Cell Fitness
GSE245531	The activity of the mammalian DNA transposon piggyBat from Myotis lucifugus is restricted by its own terminal inverted repeat
GSE247134	Single cell transcriptomics of cerebrospinal fluid cells from patients with recent-onset narcolepsy
GSE247244	RNA secondary structure ensemble mapping in a living cell identifies conserved RNA regulatory switches and thermometers
GSE247636	Growth factor-induced activation of MSK2 leads to phosphorylation of H3K9me2S10 and corresponding changes in gene expression [CUT&RUN]
GSE247639	Growth factor-induced activation of MSK2 leads to phosphorylation of H3K9me2S10 and corresponding changes in gene expression
GSE248103	CTCF/RAD21 organize the ground state of chromatin-nuclear speckle association
GSE250223	UNC93B1 variants underlie TLR7-dependent autoimmunity
GSE251660	H3K9me3 and H4K29me3 CUT&Tag of therapy-induced senescent and diapause-like cancer cells
GSE252764	IL-12 drives the diferentiation of human T follicular regulatory cells [CUT&RUN]
GSE252766	IL-12 drives the diferentiation of human T follicular regulatory cells
GSE254034	Integration of hyperspectral imaging and transcriptomics from individual cells with HyperSeq
GSE255779	The integrated stress response finetunes 18S nonfunctional rRNA decay (DMS-MaPseq)
GSE255780	The integrated stress response finetunes 18S nonfunctional rRNA decay (Ribo-Seq)
GSE255781	The integrated stress response finetunes 18S nonfunctional rRNA decay (selective Ribo-Seq)
GSE255783	The integrated stress response finetunes 18S nonfunctional rRNA decay (SHAP-MaP)
GSE255784	The integrated stress response finetunes 18S nonfunctional rRNA decay
GSE255980	Generation and characterization of inducible KRAB-dCas9 iPSCs from primates for cross-species CRISPRi
GSE260836	Long-lasting B cell convergence to distinct broadly reactive epitopes following vaccination with chimeric influenza virus hemagglutinins
GSE260941	Long-lasting B cell convergence to distinct broadly reactive epitopes following vaccination with chimeric influenza virus hemagglutinins II
GSE260943	Mutability and hypermutation antagonize immunoglobulin codon optimality; Analysis of human tonsil B cells.
GSE260944	Mutability and hypermutation antagonize immunoglobulin codon optimality; Analysis of human MLN B cells.
GSE263449	Transcription start site analysis of NIPBL depletion in cancer cell line
GSE266343	CRISPR activation screens identify the SWI-SNF ATPases as suppressors of ferroptosis
GSE266350	Correlating BRG1 binding with histone methylation and acetylation
GSE266351	Decoding gene expression heterogeneity in Triple Negative Breast Cancer [scRNA-seq]
GSE266356	Decoding gene expression heterogeneity in Triple Negative Breast Cancer
GSE268052	High-throughput quantification of cell-surface proteins for accelerated cancer therapeutic discovery
GSE268056	Epstein-Barr virus protein EBNA-LP engages YY1 through leucine-rich motifs to promote naïve B cell transformation [Cut&Run]
GSE268230	Extracellular vesicles alter trophoblast function in pregnancies complicated by COVID-19
GSE268305	Epstein-Barr virus protein EBNA-LP engages YY1 through leucine-rich motifs to promote naïve B cell transformation
GSE268622	CTCF/cohesin organize the ground state of chromatin-nuclear speckle association [CUT&RUN, CUT&Tag and RNA-seq]
GSE271120	TRAIL-induced cytokine production via NFKB2 pathway promotes neutrophil chemotaxis and immune suppression in triple negative breast cancers [MDA-MB-231]
GSE272399	Transfer RNA acetylation regulates in vivo mammalian stress signaling [RiboSeq and DisomeSeq]
GSE272400	Transfer RNA acetylation regulates in vivo mammalian stress signaling [tRNAseq]
GSE272562	Dynamic activation of rAAV transgene expression by a small molecule that recruits endogenous transcriptional machinery
GSE273995	Cell-intrinsic platinum response and associated genetic and gene expression signatures in ovarian cancer cell lines and isogenic models
GSE274006	Cell-intrinsic platinum response and associated genetic and gene expression signatures in ovarian cancer cell lines and isogenic models [isogenic models]
GSE276436	Mechanism of Topoisomerase 2 inhibitor tolerance uncovers a fundamental histone H1 biogenesis pathway
GSE276834	ATRX Condensates Formed by Liquid-Liquid Phase Separation Regulate Neural Progenitor Cell Identity (RNA)
GSE276836	ATRX Condensates Formed by Liquid-Liquid Phase Separation Regulate Neural Progenitor Cell Identity
GSE277568	Effect of p.E475G mutation in the PNPT1 gene on 293T global transcriptome
GSE278242	Mapping diverse RNA modifications simulataneously by proximity barcode sequencing
GSE278880	Isocitrate Dehydrogenase 1 Primes Group-3 Medulloblastomas For Cuproptosis
GSE279234	SETD2 loss-of-function uniquely sensitizes cells to epigenetic targeting of NSD1-directed H3K36 methylation
GSE283716	Structural determinants of inverted Alu-mediated backsplicing revealed by -MaP and -JuMP
GSE283794	BCL11A is required for normal erythropoiesis [CUT&Run]
GSE283797	BCL11A is required for normal erythropoiesis
GSE287102	Profiling of RNAs associated with LINE-1 ORF1p in pancreatic ductal adenocarcinoma
GSE287105	LINE-1 ORF1p immune evasion mechanisms in pancreatic ductal adenocarcinoma
GSE290552	Mapping the Molecular Signature of Progressive Multiple Sclerosis [197191]
GSE290554	Mapping the Molecular Signature of Progressive Multiple Sclerosis
GSE293691	Menin-MLL complex cooperates with NF-Y to promote HCC survival [ATAC-seq]
GSE293692	Menin-MLL complex cooperates with NF-Y to promote HCC survival [CUT&RUN]
GSE293693	Menin-MLL complex cooperates with NF-Y to promote HCC survival [RNA-seq]
GSE294015	Precise modulation of mSWI/SNF identified dosage-sensitive chromatin regulation (human cell)
GSE300356	snRNA-seq of Sandhoff disease brain cells

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