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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Oct 05, 2021 |
| Title |
NextSeq 2000 (Arabidopsis thaliana) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Arabidopsis thaliana |
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| Submission date |
Oct 05, 2021 |
| Last update date |
Oct 05, 2021 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (759)
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GSM5613877, GSM5613878, GSM5613879, GSM5830265, GSM5830266, GSM5830267
GSM5830268, GSM5830269, GSM5830270, GSM5830271, GSM5830272, GSM5830273, GSM5830274, GSM5830275, GSM5830276, GSM5830277, GSM5830278, GSM5830279, GSM5830280, GSM6208618, GSM6208619, GSM6208620, GSM6208621, GSM6208622, GSM6208623, GSM6208624, GSM6208625, GSM6208626, GSM6208627, GSM6603440, GSM6603441, GSM6603442, GSM6603443, GSM6603444, GSM6603445, GSM6603446, GSM6603447, GSM6603448, GSM6603449, GSM6603450, GSM6603451, GSM6603452, GSM6603453, GSM6603454, GSM6603455, GSM6603456, GSM6603457, GSM6603458, GSM6603459, GSM6603460, GSM6603461, GSM6603462, GSM6603463, GSM6603464, GSM6603465, GSM6603466, GSM6603467, GSM6603468, GSM6603469, GSM6603470, GSM6603471, GSM6900891, GSM6900892, GSM6900893, GSM6900894, GSM6900895, GSM6900896, GSM6900897, GSM6900898, GSM6900899, GSM6900900, GSM6900901, GSM6900902, GSM6900903, GSM6900904, GSM6900905, GSM6900906, GSM6900907, GSM6900908, GSM6900909, GSM6900910, GSM6900911, GSM6900912, GSM6900913, GSM6900914, GSM7080290, GSM7080291, GSM7080292, GSM7080293, GSM7080294, GSM7080295, GSM7080296, GSM7080297, GSM7080298, GSM7080299, GSM7290814, GSM7290815, GSM7290816, GSM7290817, GSM7290818, GSM7290819, GSM7290820, GSM7290821, GSM7290822, GSM7290823, GSM7290824, GSM7290825, GSM7290826, GSM7290827, GSM7290828, GSM7290829, GSM7290853, GSM7290854, GSM7290855, GSM7290856, GSM7290857, GSM7290858, GSM7290859, GSM7290860, GSM7290861, GSM7290862, GSM7290863, GSM7290864, GSM7290865, GSM7598726, GSM7598727, GSM7598729, GSM7598730, GSM7598731, GSM7598732, GSM7598733, GSM7598734, GSM7598735, GSM7598736, GSM7598737, GSM7598738, GSM7598739, GSM7598740, GSM7598741, GSM7598742, GSM7675095, GSM7675096, GSM7675097, GSM7675098, GSM7675099, GSM7675100, GSM7675101, GSM7675102, GSM7675103, GSM7675104, GSM7675105, GSM7675106, GSM7675107, GSM7675108, GSM7675109, GSM7675110, GSM7675111, GSM7675112, GSM7717250, GSM7717251, GSM7717252, GSM7717253, GSM7717254, GSM7717255, GSM7717256, GSM7717257, GSM7717258, GSM7717259, GSM7717260, GSM7717261, GSM7717262, GSM7717263, GSM7717264, GSM7717265, GSM7717266, GSM7717267, GSM7717268, GSM7717269, GSM7717270, GSM7717271, GSM7717272, GSM7717273, GSM7717274, GSM7764435, GSM7764436, GSM7764437, GSM7764438, GSM7764439, GSM7764440, GSM7764441, GSM7764442, GSM7764443, GSM7764444, GSM7764445, GSM7764446, GSM7764447, GSM7764448, GSM7764449, GSM7764450, GSM7764451, GSM7764452, GSM7764453, GSM7764454, GSM7764455, GSM7764456, GSM7764457, GSM7764635, GSM7764636, GSM7764637, GSM7764638, GSM7764639, GSM7764640, GSM7764641, GSM7764642, GSM7770125, GSM7770126, GSM7770127, GSM7770128, GSM7770129, GSM7770130, GSM7770131, GSM7808290, GSM7808291, GSM7808292, GSM7808293, GSM7808294, GSM7808295, GSM7808296, GSM7808297, GSM7808298, GSM7808299, GSM7808300, GSM7808301, GSM7808302, GSM7808303, GSM7808304, GSM7808305, GSM7808306, GSM7808307, GSM7808308, GSM7808309, GSM7808310, GSM7808311, GSM7808312, GSM7808313, GSM7808314, GSM7808315, GSM7808316, GSM7808317, GSM7808318, GSM7808319, GSM7808320, GSM7808321, GSM7808322, GSM7808323, GSM7808324, GSM7808325, GSM7808326, GSM7808327, GSM7808328, GSM7808329, GSM7808330, GSM7808331, GSM7808332, GSM7808333, GSM7808334, GSM7808335, GSM7808336, GSM7830719, GSM7830720, GSM7830721, GSM7830722, GSM7901040, GSM7901041, GSM7901042, GSM7901043, GSM7901044, GSM7901045, GSM7901046, GSM7901047, GSM7901048, GSM7901049, GSM7901050, GSM7901051, GSM7901052, GSM7901053, GSM7901054, GSM7901055, GSM7901056, GSM7901057, GSM7901058, GSM7901059, GSM7901060, GSM7901061, GSM7901062, GSM7901063, GSM7901064, GSM7901065, GSM7901066, GSM7901067, GSM8002243, GSM8002244, GSM8002245, GSM8002246, GSM8002247, GSM8002248, GSM8002249, GSM8002250, GSM8002251, GSM8002252, GSM8002253, GSM8002254, GSM8002255, GSM8002256, GSM8002257, GSM8002258, GSM8002259, GSM8002260, GSM8002261, GSM8002262, GSM8002263, GSM8002264, GSM8002265, GSM8002266, GSM8002267, GSM8002268, GSM8002269, GSM8002270, GSM8002271, GSM8002272, GSM8002273, GSM8002274, GSM8002275, GSM8002276, GSM8002277, GSM8002278, GSM8025524, GSM8025525, GSM8025526, GSM8025527, GSM8025528, GSM8025529, GSM8025530, GSM8025531, GSM8025532, GSM8025533, GSM8025534, GSM8025535, GSM8025536, GSM8025537, GSM8025538, GSM8025539, GSM8025540, GSM8025541, GSM8025542, GSM8025543, GSM8025544, GSM8025545, GSM8025546, GSM8025547, GSM8025548, GSM8025549, GSM8025550, GSM8025551, GSM8025552, GSM8025553, GSM8025554, GSM8025555, GSM8025556, GSM8025557, GSM8025558, GSM8025559, GSM8025560, GSM8025561, GSM8025562, GSM8025563, GSM8025564, GSM8025565, GSM8025566, GSM8025567, GSM8025568, GSM8025569, GSM8025570, GSM8025571, GSM8143915, GSM8143916, GSM8143917, GSM8143918, GSM8144114, GSM8144115, GSM8144116, GSM8144117, GSM8144118, GSM8144119, GSM8144120, GSM8144121, GSM8144122, GSM8144123, GSM8144124, GSM8144125, GSM8144126, GSM8144127, GSM8144128, GSM8144129, GSM8144130, GSM8144131, GSM8144132, GSM8144133, GSM8144134, GSM8144135, GSM8179736, GSM8179737, GSM8179738, GSM8179739, GSM8194288, GSM8194289, GSM8194290, GSM8194291, GSM8194292, GSM8194293, GSM8194294, GSM8194295, GSM8194296, GSM8194297, GSM8194298, GSM8194299, GSM8194300, GSM8194301, GSM8194302, GSM8194303, GSM8194304, GSM8194305, GSM8194306, GSM8194307, GSM8194308, GSM8194309, GSM8194310, GSM8194311, GSM8239844, GSM8239845, GSM8239846, GSM8239847, GSM8239848, GSM8239849, GSM8239850, GSM8239851, GSM8239852, GSM8239853, GSM8239854, GSM8239855, GSM8239856, GSM8239857, GSM8239858, GSM8239859, GSM8239860, GSM8239861, GSM8389278, GSM8389279, GSM8389280, GSM8389281, GSM8389282, GSM8389283, GSM8389284, GSM8389285, GSM8389286, GSM8389287, GSM8389288, GSM8389289, GSM8389290, GSM8389291, GSM8389292, GSM8489210, GSM8489211, GSM8489212, GSM8489213, GSM8545243, GSM8545244, GSM8545245, GSM8545246, GSM8545247, GSM8637880, GSM8637881, GSM8637882, GSM8637883, GSM8637884, GSM8637885, GSM8637886, GSM8637887, GSM8637888, GSM8637889, GSM8637890, GSM8637891, GSM8637892, GSM8637893, GSM8637894, GSM8637895, GSM8637896, GSM8637897, GSM8637898, GSM8637899...
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| Series (47)
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| GSE185388 |
ChIP-seq of a transcriptional regulator AtSDR4L |
| GSE194186 |
Arabidopsis LSM1 and DCP5 proteins aid evasion of translational repression during Cauliflower Mosaic Virus infection |
| GSE201629 |
Depositing centromere repeats induces heritable intragenic heterochromatin establishment and spreading in Arabidopsis |
| GSE205208 |
PIF7 is the master regulator of thermomorphogenesis in shade [ChIP-seq] |
| GSE205210 |
PIF7 is the master regulator of thermomorphogenesis in shade |
| GSE214303 |
RNAPII ChIP-Sequencing of A.thaliana tfiis mutant lines under heat stress conditions |
| GSE221857 |
Hormone-regulated expansins - expression, localization and cell wall biomechanics in the control of Arabidopsis root growth |
| GSE231563 |
Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation [ChIP-seq] |
| GSE231564 |
Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation [bisulfite-seq] |
| GSE231565 |
Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation. |
| GSE233927 |
Comparative analysis of nascent transcription among plant species |
| GSE237275 |
Long non-coding RNAs contribute to DNA damage resistance in Arabidopsis thaliana |
| GSE239836 |
Arabidopsis AGO1 N-terminal Poly-Q domain promotes phase separation and association with stress granules during heat stress [miRNA-seq] |
| GSE239837 |
Arabidopsis AGO1 N-terminal Poly-Q domain promotes phase separation and association with stress granules during heat stress |
| GSE241143 |
Transcription Elongation Factor ChIP-Seq in A.thaliana |
| GSE242191 |
CLSY docking to Pol IV requires a conserved domain critical for small RNA biogenesis and transposon silencing. |
| GSE242479 |
Physiochemical interaction between osmotic stress and a bacterial exometabolite promotes plant disease |
| GSE242499 |
Salicylic acid and RNA interference mediate antiviral immunity of plant stem cells (Previous preprint title: A hormone-activated mobile RNAi pathway defends plant stem cells from virus infection) |
| GSE242762 |
Dynamic DNA methylation turnover in gene bodies is associated with enhanced gene expression plasticity |
| GSE244175 |
Root meristem growth factor 1 (RGF1) controls the PLETHORA 2 (PLT2) protein stability by redox-based modification in root meristem |
| GSE244846 |
The plant POLYMERASE-ASSOCIATED FACTOR1 complex links transcription and H2B monoubiquitination genome wide [ChIP-seq] |
| GSE244850 |
The plant POLYMERASE-ASSOCIATED FACTOR1 complex links transcription and H2B monoubiquitination genome wide |
| GSE247352 |
Substrate specificity and protein stability drive the divergence of plant-specific DNA methyltransferases [Bisulfite-seq] |
| GSE247354 |
Substrate specificity and protein stability drive the divergence of plant-specific DNA methyltransferases |
| GSE247811 |
Arabidopsis mRNA export factor MOS11: molecular interactions and role in abiotic stress responses |
| GSE252502 |
S1 basic leucine zipper transcription factors shape plant architecture by controlling C/N partitioning to apical and lateral organs |
| GSE253674 |
Differential usage of shared binding sites drives functional specialization of an essential family of transcription factors [RNA-seq] |
| GSE253676 |
Differential usage of shared binding sites drives functional specialization of an essential family of transcription factors |
| GSE261431 |
A single nuclei transcriptome census of the Arabidopsis maturing root identifies that MYB67 controls phellem cell maturation [DAP-seq] |
| GSE261437 |
A single nuclei transcriptome census of the Arabidopsis maturing root identifies that MYB67 controls phellem cell maturation [Bulk mRNA-seq] |
| GSE263549 |
The histone demethylase JMJ27 acts during the UV-induced modulation of H3K9me2 landscape and facilitates photodamage repair |
| GSE266049 |
VRN2-PRC2 facilitates light-triggered repression of PIF signaling to coordinate growth in Arabidopsis |
| GSE271932 |
Temporal profiling of the phosphate starvation response in Arabidopsis root hair cells reveals that induction of polycomb target genes does not depend on removal of H3K27me3 or H2A.Z III |
| GSE271993 |
Temporal profiling of the phosphate starvation response in Arabidopsis root hair cells reveals that induction of polycomb target genes does not depend on removal of H3K27me3 or H2A.Z |
| GSE282197 |
Transcription factors instruct DNA methylation patterns in plant reproductive tissues [methylC-seq] |
| GSE282198 |
Transcription factors instruct DNA methylation patterns in plant reproductive tissues [small RNA-seq] |
| GSE282200 |
Transcription factors instruct DNA methylation patterns in plant reproductive tissues |
| GSE283977 |
Diverse plant RNAs coat Arabidopsis leaves and are distinct from apoplastic RNAs |
| GSE284704 |
Impact of URT1 and HESO1 TUTases on the steady state level of mRNAs in Arabidopsis seeds and flowers |
| GSE285599 |
Bacillus strains act independently of immune system activation and compensate for its absence |
| GSE286232 |
Differential expression and localization of expansins in Arabidopsis shoots: Implications for cell wall dynamics and drought tolerance |
| GSE288352 |
Transcription factors instruct DNA methylation patterns in plant reproductive tissues [mRNA-seq] |
| GSE293328 |
Evaporative cooling signals for wound healing in plants |
| GSE297648 |
RNA tomography reveals spatial gene expression maps of Arabidopsis thaliana roots infected with Heterodera schachtii |
| GSE301177 |
A subset of group S1 bZIP transcription factors controls resource management during starvation and recovery in Arabidopsis |
| GSE303396 |
Brassinosteroids mediate proper coordination of sepal elongation |
| GSE307606 |
Aging drives a program of DNA methylation decay in plant organs [EM-Seq] |
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| Supplementary data files not provided |
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