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Status
Public on Mar 19, 2020
Title
[RJPGene-1_1-st] Affymetrix Rice (US) Gene 1.0 ST Array [transcript (gene) version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Oryza sativa Manufacturer
Affymetrix
Manufacture protocol
See manufacturer's web site
Description
#%create_date=Thu Jun 2 01:05:50 2016 PDT
Submission date
Dec 13, 2018
Last update date
Mar 21, 2020
Contact name
Pascal Gantet
E-mail(s)
pascal.gantet@umontpellier.fr Organization name
Université Montpellier 2
Department
IRD
Lab
UMR DIADE
Street address
Avenue Agropolis
City
Montpellier
ZIP/Postal code
34000
Country
France
Samples (132)
GSM3511865 , GSM3511866 , GSM3511867 , GSM3511868 , GSM3511869 , GSM3511870
GSM3511871 ,
GSM3511872 ,
GSM3511873 ,
GSM3511874 ,
GSM3511875 ,
GSM3511876 ,
GSM3511877 ,
GSM3511878 ,
GSM3511879 ,
GSM3511880 ,
GSM3511881 ,
GSM3511882 ,
GSM3511883 ,
GSM3511884 ,
GSM3511885 ,
GSM3511886 ,
GSM3511887 ,
GSM3511888 ,
GSM3511889 ,
GSM3511890 ,
GSM3511891 ,
GSM3511892 ,
GSM3511893 ,
GSM3511894 ,
GSM3511895 ,
GSM3511896 ,
GSM3511897 ,
GSM3511898 ,
GSM3511899 ,
GSM3511900 ,
GSM3511901 ,
GSM3511902 ,
GSM3511903 ,
GSM3511904 ,
GSM3511905 ,
GSM3511906 ,
GSM3511907 ,
GSM3511908 ,
GSM3511909 ,
GSM3511910 ,
GSM3511911 ,
GSM3511912 ,
GSM3511913 ,
GSM3511914 ,
GSM3511915 ,
GSM3511916 ,
GSM3511917 ,
GSM3511918 ,
GSM3511919 ,
GSM3511920 ,
GSM3511921 ,
GSM3511922 ,
GSM3511923 ,
GSM3511924 ,
GSM3511925 ,
GSM3511926 ,
GSM3511927 ,
GSM3511928 ,
GSM3511929 ,
GSM3511930 ,
GSM3511931 ,
GSM3511932 ,
GSM3511933 ,
GSM3511934 ,
GSM3511935 ,
GSM3511936 ,
GSM3511937 ,
GSM3511938 ,
GSM3511939 ,
GSM3511940 ,
GSM3511941 ,
GSM3511942 ,
GSM3511943 ,
GSM3511944 ,
GSM3511945 ,
GSM3511946 ,
GSM3511947 ,
GSM3511948 ,
GSM3511949 ,
GSM3511950 ,
GSM3511951 ,
GSM3511952 ,
GSM3511953 ,
GSM3511954 ,
GSM3511955 ,
GSM3511956 ,
GSM3511957 ,
GSM3511958 ,
GSM3511959 ,
GSM3511960 ,
GSM3912687 ,
GSM3912688 ,
GSM3912689 ,
GSM3912690 ,
GSM3912691 ,
GSM3912692 ,
GSM3912693 ,
GSM3912694 ,
GSM3912695 ,
GSM3912696 ,
GSM3912697 ,
GSM3912698 ,
GSM4420246 ,
GSM4420247 ,
GSM4420248 ,
GSM4420249 ,
GSM4420250 ,
GSM4420251 ,
GSM4420252 ,
GSM4420253 ,
GSM4420254 ,
GSM4420255 ,
GSM4420256 ,
GSM4420257 ,
GSM5172278 ,
GSM5172279 ,
GSM5172280 ,
GSM5172281 ,
GSM5172282 ,
GSM5172283 ,
GSM5172284 ,
GSM5172285 ,
GSM5172286 ,
GSM5172287 ,
GSM5172288 ,
GSM5172289 Series (4)
GSE123819 Time-series transcript profiling analysis in stem base of rice crown rootless 1 mutant after ectopic expression induction by dexamethasone of the CRL1 gene
GSE133593 Genome-wide transcriptome of rice laser-microdissected crown root primordia reveals genes expressed specifically during the early differentiation stages of crown roots
GSE147200 Overexpression of OsbHLH044 transcription factor controls a negative regulatory module associated with plant cell death and stress inhibition in rice crown root development
GSE168915 Comparison of transcriptomic adjustments to availability of sugar, cellular energy, and oxygen in germinating rice embryos
Data table header descriptions ID SPOT_ID seqname strand start stop total_probes gene_assignment mrna_assignment swissprot unigene GO_biological_process GO_cellular_component GO_molecular_function pathway protein_domains crosshyb_type category
Data table ID SPOT_ID seqname strand start stop total_probes gene_assignment mrna_assignment swissprot unigene GO_biological_process GO_cellular_component GO_molecular_function pathway protein_domains crosshyb_type category 16080000
16080000
g11957-1
+
1
1062
25
---
"NM_001058831 // RefSeq // Oryza sativa Japonica Group Os04g0236400 (Os04g0236400) mRNA, complete cds. // g11957-1 // 100 // 100 // 25 // 25 // 1 /// LOC_Os04g16770.1 // Rice Genome Annotation Project at MSU // cDNA|photosynthetic reaction center protein, putative, expressed // g11957-1 // 100 // 100 // 25 // 25 // 1 /// LOC_Os08g35420.1 // Rice Genome Annotation Project at MSU // cDNA|photosynthetic reaction center protein, putative, expressed // g11957-1 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g21192.1 // Rice Genome Annotation Project at MSU // cDNA|photosystem Q, putative, expressed // g11957-1 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g39880.1 // Rice Genome Annotation Project at MSU // cDNA|photosynthetic reaction center protein, putative, expressed // g11957-1 // 40 // 40 // 10 // 25 // 1 /// LOC_Os12g19580.1 // Rice Genome Annotation Project at MSU // cDNA|photosynthetic reaction center protein, putative, expressed // g11957-1 // 40 // 40 // 10 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080002
16080002
g11957-10
+
1
270
26
---
"LOC_Os01g58039.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf70, putative, expressed // g11957-10 // 100 // 100 // 26 // 26 // 1 /// LOC_Os02g24626.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf70, putative // g11957-10 // 100 // 100 // 26 // 26 // 1 /// LOC_Os04g16878.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf70, putative // g11957-10 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g21216.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf70, putative // g11957-10 // 100 // 100 // 26 // 26 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080004
16080004
g11957-100
+
1
471
28
---
"NM_001186879 // RefSeq // Oryza sativa Japonica Group Os04g0234750 (Os04g0234750) mRNA, partial cds. // g11957-100 // 100 // 100 // 28 // 28 // 1 /// NM_001186880 // RefSeq // Oryza sativa Japonica Group Os04g0237800 (Os04g0237800) mRNA, complete cds. // g11957-100 // 100 // 100 // 28 // 28 // 1 /// AK060247 // GenBank // Oryza sativa Japonica Group cDNA clone:001-003-H11, full insert sequence. // g11957-100 // 100 // 100 // 28 // 28 // 1 /// AK242734 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090048I16, full insert sequence. // g11957-100 // 100 // 100 // 28 // 28 // 1 /// AK243011 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090097N04, full insert sequence. // g11957-100 // 100 // 100 // 28 // 28 // 1 /// AK288637 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090055M20, full insert sequence. // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os02g24576.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os04g16712.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os04g16798.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os04g16856.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os04g16886.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os07g25002.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os08g15246.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1 /// LOC_Os10g21372.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S7, putative, expressed // g11957-100 // 100 // 100 // 28 // 28 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080006
16080006
g11957-101
+
1
1533
25
---
"LOC_Os04g16742.1 // Rice Genome Annotation Project at MSU // cDNA|NADPH-dependent oxidoreductase, putative, expressed // g11957-101 // 100 // 100 // 25 // 25 // 1 /// LOC_Os04g16854.1 // Rice Genome Annotation Project at MSU // cDNA|NADPH-dependent oxidoreductase, putative, expressed // g11957-101 // 100 // 100 // 25 // 25 // 1 /// LOC_Os07g25004.1 // Rice Genome Annotation Project at MSU // cDNA|NADPH-dependent oxidoreductase, putative, expressed // g11957-101 // 100 // 100 // 25 // 25 // 1 /// LOC_Os08g15248.1 // Rice Genome Annotation Project at MSU // cDNA|NADPH-dependent oxidoreductase, putative, expressed // g11957-101 // 100 // 100 // 25 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080008
16080008
g11957-102
+
1
750
25
---
"LOC_Os04g16804.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf73, putative, expressed // g11957-102 // 100 // 100 // 25 // 25 // 1 /// LOC_Os05g22868.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf73, putative, expressed // g11957-102 // 100 // 100 // 25 // 25 // 1 /// LOC_Os07g25006.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf73, putative, expressed // g11957-102 // 100 // 100 // 25 // 25 // 1 /// LOC_Os08g15252.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf73, putative, expressed // g11957-102 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g21366.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf73, putative, expressed // g11957-102 // 100 // 100 // 25 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080012
16080012
g11957-104
+
1
282
26
---
"NM_001189356 // RefSeq // Oryza sativa Japonica Group Os10g0573450 (Os10g0573450) mRNA, partial cds. // g11957-104 // 50 // 50 // 13 // 26 // 1 /// BGIOSGA001205-TA // BGI Rice Genome // 50S ribosomal protein L23, chloroplastic [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-104 // 100 // 100 // 26 // 26 // 1 /// LOC_Os04g16782.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 50S ribosomal protein L23, putative // g11957-104 // 100 // 100 // 26 // 26 // 1 /// LOC_Os04g16812.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 50S ribosomal protein L23, putative // g11957-104 // 100 // 100 // 26 // 26 // 1 /// LOC_Os07g25014.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 50S ribosomal protein L23, putative // g11957-104 // 100 // 100 // 26 // 26 // 1 /// LOC_Os08g15258.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 50S ribosomal protein L23, putative, expressed // g11957-104 // 100 // 100 // 26 // 26 // 1 /// LOC_Os09g24402.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 50S ribosomal protein L23, putative // g11957-104 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g21358.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 50S ribosomal protein L23, putative // g11957-104 // 100 // 100 // 26 // 26 // 1 /// AK063155 // GenBank // Oryza sativa Japonica Group cDNA clone:001-111-H11, full insert sequence. // g11957-104 // 50 // 50 // 13 // 26 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080014
16080014
g11957-105
+
1
822
25
---
"NM_001189356 // RefSeq // Oryza sativa Japonica Group Os10g0573450 (Os10g0573450) mRNA, partial cds. // g11957-105 // 60 // 60 // 15 // 25 // 1 /// AK059477 // GenBank // Oryza sativa Japonica Group cDNA clone:001-028-F01, full insert sequence. // g11957-105 // 64 // 64 // 16 // 25 // 1 /// AK063155 // GenBank // Oryza sativa Japonica Group cDNA clone:001-111-H11, full insert sequence. // g11957-105 // 60 // 60 // 15 // 25 // 1 /// AK288604 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090052J10, full insert sequence. // g11957-105 // 64 // 64 // 16 // 25 // 1 /// BGIOSGA010580-TA // BGI Rice Genome // Putative uncharacterized protein [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-105 // 60 // 60 // 15 // 25 // 1 /// BGIOSGA039199-TA // BGI Rice Genome // locus=Scaffold017458:2310:3418:- // g11957-105 // 52 // 52 // 13 // 25 // 1 /// BGIOSGA039664-TA // BGI Rice Genome // 50S ribosomal protein L2, chloroplastic [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-105 // 72 // 72 // 18 // 25 // 1 /// BGIOSGA040154-TA // BGI Rice Genome // Putative uncharacterized protein [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-105 // 60 // 60 // 15 // 25 // 1 /// AK242823 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090065G22, full insert sequence. // g11957-105 // 40 // 40 // 10 // 25 // 1 /// BGIOSGA010388-TA // BGI Rice Genome // Putative uncharacterized protein [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-105 // 40 // 40 // 10 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080016
16080016
g11957-106
+
1
414
28
---
"LOC_Os04g16816.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf72, putative // g11957-106 // 100 // 100 // 28 // 28 // 1 /// LOC_Os07g25018.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf72, putative // g11957-106 // 100 // 100 // 28 // 28 // 1 /// LOC_Os09g24406.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf72, putative // g11957-106 // 100 // 100 // 28 // 28 // 1 /// LOC_Os10g21356.1 // Rice Genome Annotation Project at MSU // cDNA|uncharacterized protein ycf72, putative, expressed // g11957-106 // 100 // 100 // 28 // 28 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080018
16080018
g11957-107
+
1
249
26
---
"AK059477 // GenBank // Oryza sativa Japonica Group cDNA clone:001-028-F01, full insert sequence. // g11957-107 // 100 // 100 // 26 // 26 // 1 /// AK242823 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090065G22, full insert sequence. // g11957-107 // 100 // 100 // 26 // 26 // 1 /// AK288604 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090052J10, full insert sequence. // g11957-107 // 100 // 100 // 26 // 26 // 1 /// BGIOSGA039200-TA // BGI Rice Genome // Putative uncharacterized protein orf200 [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-107 // 85 // 85 // 22 // 26 // 1 /// LOC_Os04g16775.1 // Rice Genome Annotation Project at MSU // cDNA|conserved hypothetical protein // g11957-107 // 100 // 100 // 26 // 26 // 1 /// LOC_Os07g25022.1 // Rice Genome Annotation Project at MSU // cDNA|conserved hypothetical protein // g11957-107 // 100 // 100 // 26 // 26 // 1 /// LOC_Os08g15264.1 // Rice Genome Annotation Project at MSU // cDNA|conserved hypothetical protein // g11957-107 // 100 // 100 // 26 // 26 // 1 /// LOC_Os09g24408.1 // Rice Genome Annotation Project at MSU // cDNA|conserved hypothetical protein // g11957-107 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g21352.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S19, putative, expressed // g11957-107 // 50 // 50 // 13 // 26 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080020
16080020
g11957-108
+
1
282
26
---
"NM_001188546 // RefSeq // Oryza sativa Japonica Group Os08g0252001 (Os08g0252001) mRNA, complete cds. // g11957-108 // 46 // 46 // 12 // 26 // 1 /// AK059477 // GenBank // Oryza sativa Japonica Group cDNA clone:001-028-F01, full insert sequence. // g11957-108 // 100 // 100 // 26 // 26 // 1 /// AK072149 // GenBank // Oryza sativa Japonica Group cDNA clone:J013128P04, full insert sequence. // g11957-108 // 100 // 100 // 26 // 26 // 1 /// AK242823 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090065G22, full insert sequence. // g11957-108 // 100 // 100 // 26 // 26 // 1 /// AK288604 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090052J10, full insert sequence. // g11957-108 // 100 // 100 // 26 // 26 // 1 /// LOC_Os04g16772.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S19, putative // g11957-108 // 100 // 100 // 26 // 26 // 1 /// LOC_Os04g16818.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S19, putative // g11957-108 // 100 // 100 // 26 // 26 // 1 /// LOC_Os07g25024.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S19, putative // g11957-108 // 100 // 100 // 26 // 26 // 1 /// LOC_Os08g15266.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S19, putative // g11957-108 // 100 // 100 // 26 // 26 // 1 /// LOC_Os09g19952.1 // Rice Genome Annotation Project at MSU // cDNA|ribosomal protein L22, putative, expressed // g11957-108 // 100 // 100 // 26 // 26 // 1 /// LOC_Os09g24412.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S19, putative // g11957-108 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g21352.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S19, putative, expressed // g11957-108 // 100 // 100 // 26 // 26 // 1 /// BGIOSGA031470-TA // BGI Rice Genome // 30S ribosomal protein S19, chloroplastic [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-108 // 50 // 50 // 13 // 26 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080022
16080022
g11957-11
+
1
213
26
---
LOC_Os02g24624.1 // Rice Genome Annotation Project at MSU // cDNA|conserved hypothetical protein // g11957-11 // 100 // 100 // 26 // 26 // 1 /// LOC_Os04g16882.1 // Rice Genome Annotation Project at MSU // cDNA|conserved hypothetical protein // g11957-11 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g21218.1 // Rice Genome Annotation Project at MSU // cDNA|conserved hypothetical protein // g11957-11 // 100 // 100 // 26 // 26 // 1
---
---
---
---
---
---
---
3
chloroplast
16080024
16080024
g11957-12
+
1
105
25
---
"AK058861 // GenBank // Oryza sativa Japonica Group cDNA clone:001-005-F02, full insert sequence. // g11957-12 // 100 // 100 // 25 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080028
16080028
g11957-14
+
1
3228
25
---
"LOC_Os04g16820.1 // Rice Genome Annotation Project at MSU // cDNA|DNA-directed RNA polymerase subunit beta, putative, expressed // g11957-14 // 100 // 100 // 25 // 25 // 1 /// BGIOSGA010937-TA // BGI Rice Genome // DNA-directed RNA polymerase subunit beta [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-14 // 72 // 72 // 18 // 25 // 1 /// AK288233 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090013A02, full insert sequence. // g11957-14 // 40 // 40 // 10 // 25 // 1 /// AK288666 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090058L10, full insert sequence. // g11957-14 // 40 // 40 // 10 // 25 // 1 /// BGIOSGA040200-TA // BGI Rice Genome // Putative uncharacterized protein [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-14 // 44 // 44 // 11 // 25 // 1 /// LOC_Os05g22830.1 // Rice Genome Annotation Project at MSU // cDNA|DNA-directed RNA polymerase subunit beta, putative, expressed // g11957-14 // 40 // 40 // 10 // 25 // 1 /// LOC_Os05g22860.1 // Rice Genome Annotation Project at MSU // cDNA|DNA-directed RNA polymerase subunit beta, putative, expressed // g11957-14 // 40 // 40 // 10 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080030
16080030
g11957-15
+
1
2049
25
---
"BGIOSGA040648-TA // BGI Rice Genome // DNA-directed RNA polymerase subunit beta' [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-15 // 80 // 80 // 20 // 25 // 1 /// LOC_Os02g24614.1 // Rice Genome Annotation Project at MSU // cDNA|DNA-directed RNA polymerase subunit beta, putative, expressed // g11957-15 // 100 // 100 // 25 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080032
16080032
g11957-16
+
1
4542
25
---
"NM_001186883 // RefSeq // Oryza sativa Japonica Group Os04g0240100 (Os04g0240100) mRNA, partial cds. // g11957-16 // 72 // 72 // 18 // 25 // 1 /// BGIOSGA014010-TA // BGI Rice Genome // DNA-directed RNA polymerase subunit beta'' [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-16 // 68 // 68 // 17 // 25 // 1 /// AK289011 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090089G14, full insert sequence. // g11957-16 // 40 // 40 // 10 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080034
16080034
g11957-17
+
1
711
25
---
"AK242953 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090088P08, full insert sequence. // g11957-17 // 88 // 88 // 22 // 25 // 1 /// LOC_Os02g24612.1 // Rice Genome Annotation Project at MSU // cDNA|ribosomal protein S2, putative, expressed // g11957-17 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g21234.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S2, putative, expressed // g11957-17 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g38278.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast 30S ribosomal protein S2, putative, expressed // g11957-17 // 100 // 100 // 25 // 25 // 1 /// BGIOSGA039969-TA // BGI Rice Genome // 30S ribosomal protein S2, chloroplastic [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-17 // 56 // 56 // 14 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080036
16080036
g11957-18
+
1
744
25
---
"NM_001071652 // RefSeq // Oryza sativa Japonica Group Os10g0527100 (Os10g0527100) mRNA, complete cds. // g11957-18 // 100 // 100 // 25 // 25 // 1 /// NM_001189173 // RefSeq // Oryza sativa Japonica Group Os10g0355100 (Os10g0355100) mRNA, complete cds. // g11957-18 // 100 // 100 // 25 // 25 // 1 /// AK121120 // GenBank // Oryza sativa Japonica Group cDNA clone:J023074F07, full insert sequence. // g11957-18 // 100 // 100 // 25 // 25 // 1 /// AK242773 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090053L15, full insert sequence. // g11957-18 // 100 // 100 // 25 // 25 // 1 /// AK242953 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090088P08, full insert sequence. // g11957-18 // 100 // 100 // 25 // 25 // 1 /// AK289037 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090091L04, full insert sequence. // g11957-18 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g21236.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast ATP synthase a chain precursor, putative, expressed // g11957-18 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g38276.1 // Rice Genome Annotation Project at MSU // cDNA|chloroplast ATP synthase a chain precursor, putative, expressed // g11957-18 // 100 // 100 // 25 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080038
16080038
g11957-19
+
1
246
26
---
"NM_001071652 // RefSeq // Oryza sativa Japonica Group Os10g0527100 (Os10g0527100) mRNA, complete cds. // g11957-19 // 100 // 100 // 26 // 26 // 1 /// NM_001189173 // RefSeq // Oryza sativa Japonica Group Os10g0355100 (Os10g0355100) mRNA, complete cds. // g11957-19 // 100 // 100 // 26 // 26 // 1 /// AK121120 // GenBank // Oryza sativa Japonica Group cDNA clone:J023074F07, full insert sequence. // g11957-19 // 100 // 100 // 26 // 26 // 1 /// AK241391 // GenBank // Oryza sativa Japonica Group cDNA, clone: J065157F16, full insert sequence. // g11957-19 // 81 // 81 // 21 // 26 // 1 /// AK242773 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090053L15, full insert sequence. // g11957-19 // 100 // 100 // 26 // 26 // 1 /// AK242953 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090088P08, full insert sequence. // g11957-19 // 100 // 100 // 26 // 26 // 1 /// AK289037 // GenBank // Oryza sativa Japonica Group cDNA, clone: J090091L04, full insert sequence. // g11957-19 // 100 // 100 // 26 // 26 // 1 /// BGIOSGA038912-TA // BGI Rice Genome // ATP synthase subunit c, chloroplastic [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-19 // 100 // 100 // 26 // 26 // 1 /// BGIOSGA040432-TA // BGI Rice Genome // ATP synthase subunit c, chloroplastic [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-19 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g21230.1 // Rice Genome Annotation Project at MSU // cDNA|ATP synthase C chain, putative, expressed // g11957-19 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g21230.2 // Rice Genome Annotation Project at MSU // cDNA|ATP synthase C chain, putative, expressed // g11957-19 // 100 // 100 // 26 // 26 // 1 /// LOC_Os10g38274.1 // Rice Genome Annotation Project at MSU // cDNA|ATP synthase C chain, putative, expressed // g11957-19 // 100 // 100 // 26 // 26 // 1"
---
---
---
---
---
---
---
3
chloroplast
16080040
16080040
g11957-2
+
1
1629
25
---
"LOC_Os04g16734.1 // Rice Genome Annotation Project at MSU // cDNA|maturase K, putative, expressed // g11957-2 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g21194.1 // Rice Genome Annotation Project at MSU // cDNA|maturase K, putative, expressed // g11957-2 // 100 // 100 // 25 // 25 // 1"
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---
---
---
---
---
---
3
chloroplast
16080042
16080042
g11957-20
+
1
543
25
---
"NM_001058830 // RefSeq // Oryza sativa Japonica Group Os04g0235600 (Os04g0235600) mRNA, partial cds. // g11957-20 // 100 // 100 // 25 // 25 // 1 /// AK110794 // GenBank // Oryza sativa Japonica Group cDNA clone:002-171-D06, full insert sequence. // g11957-20 // 92 // 92 // 23 // 25 // 1 /// LOC_Os04g16748.1 // Rice Genome Annotation Project at MSU // cDNA|ATP synthase B chain, putative, expressed // g11957-20 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g21238.1 // Rice Genome Annotation Project at MSU // cDNA|ATP synthase B chain, putative, expressed // g11957-20 // 100 // 100 // 25 // 25 // 1 /// LOC_Os10g38272.1 // Rice Genome Annotation Project at MSU // cDNA|ATP synthase B chain, putative, expressed // g11957-20 // 100 // 100 // 25 // 25 // 1 /// BGIOSGA031512-TA // BGI Rice Genome // ATP synthase subunit b, chloroplastic [gene_biotype:protein_coding transcript_biotype:protein_coding] // g11957-20 // 40 // 40 // 10 // 25 // 1 /// LOC_Os09g08464.1 // Rice Genome Annotation Project at MSU // cDNA|ATP synthase B chain, putative, expressed // g11957-20 // 40 // 40 // 10 // 25 // 1"
---
---
---
---
---
---
---
3
chloroplast
36643 94971 Kbytes .Supplementary file Size Download File type/resource GPL25932_RJpGene-1_1-st-v1.na36.irgsp1.transcript.csv.gz
9.6 Mb
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