 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Nov 17, 2014 |
| Title |
Illumina NextSeq 500 (synthetic construct) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
synthetic construct |
| |
|
| |
|
| Submission date |
Nov 17, 2014 |
| Last update date |
Nov 17, 2014 |
| Contact name |
GEO |
| Country |
USA |
| |
|
| Samples (1227)
|
GSM1547608, GSM1547609, GSM1547610, GSM1547611, GSM1547612, GSM1629193
GSM2139470, GSM2224951, GSM2224952, GSM2224953, GSM2224954, GSM2422596, GSM2422597, GSM2422598, GSM2422599, GSM2422600, GSM2422601, GSM2422602, GSM2422603, GSM2422604, GSM2422605, GSM2422606, GSM2422607, GSM2422608, GSM2422609, GSM2422610, GSM2422611, GSM2422612, GSM2422613, GSM2422614, GSM2422615, GSM2422616, GSM2422617, GSM2422618, GSM2422619, GSM2422620, GSM2422621, GSM2422622, GSM2422623, GSM2422624, GSM2422625, GSM2422626, GSM2422627, GSM2452545, GSM2452546, GSM2452547, GSM2452548, GSM2452549, GSM2452550, GSM2452551, GSM2452552, GSM2452553, GSM2452554, GSM2452555, GSM2452556, GSM2452557, GSM2452558, GSM2452559, GSM2452560, GSM2452561, GSM2452562, GSM2452563, GSM2452564, GSM2452565, GSM2452566, GSM2452567, GSM2452568, GSM2452569, GSM2452570, GSM2452571, GSM2452572, GSM2452573, GSM2452574, GSM2452575, GSM2452576, GSM2452577, GSM2452578, GSM2452579, GSM2452580, GSM2452581, GSM2452582, GSM2452583, GSM2452584, GSM2452585, GSM2452586, GSM2452587, GSM2452588, GSM2452589, GSM2452590, GSM2452591, GSM2452592, GSM2452593, GSM2452594, GSM2452595, GSM2452596, GSM2452597, GSM2452598, GSM2452599, GSM2452600, GSM2452601, GSM2452602, GSM2452603, GSM2452604, GSM2452605, GSM2452606, GSM2452607, GSM2452608, GSM2452609, GSM2452610, GSM2452611, GSM2452612, GSM2452613, GSM2452614, GSM2452615, GSM2452616, GSM2452617, GSM2452618, GSM2452619, GSM2452620, GSM2452621, GSM2452622, GSM2452623, GSM2452624, GSM2452625, GSM2452626, GSM2452627, GSM2452628, GSM2452629, GSM2452630, GSM2452631, GSM2452632, GSM2452633, GSM2452634, GSM2452635, GSM2452636, GSM2452637, GSM2452638, GSM2452639, GSM2452640, GSM2452641, GSM2452642, GSM2452643, GSM2452644, GSM2452645, GSM2452646, GSM2452647, GSM2452648, GSM2452649, GSM2452650, GSM2452651, GSM2452652, GSM2452653, GSM2452654, GSM2452655, GSM2452656, GSM2452657, GSM2452658, GSM2452659, GSM2452660, GSM2452661, GSM2452662, GSM2452663, GSM2452664, GSM2452665, GSM2452666, GSM2452667, GSM2452668, GSM2452669, GSM2452670, GSM2452671, GSM2452672, GSM2452673, GSM2452674, GSM2452675, GSM2452676, GSM2452677, GSM2452678, GSM2452679, GSM2452680, GSM2452681, GSM2452682, GSM2452683, GSM2452684, GSM2452685, GSM2452686, GSM2452687, GSM2452688, GSM2452689, GSM2452690, GSM2452691, GSM2452692, GSM2478868, GSM2478870, GSM2478876, GSM2478880, GSM2478881, GSM2478884, GSM2478888, GSM2478890, GSM2478896, GSM2478900, GSM2478901, GSM2478904, GSM2478908, GSM2478910, GSM2478916, GSM2478920, GSM2478921, GSM2478924, GSM2671836, GSM2891011, GSM2891012, GSM2891013, GSM2891014, GSM2891015, GSM2891016, GSM2891017, GSM2891018, GSM2891019, GSM2891020, GSM2891021, GSM2891022, GSM2891023, GSM2891024, GSM2891025, GSM2891026, GSM2891027, GSM2891028, GSM2891029, GSM2891030, GSM2891031, GSM2891032, GSM2891033, GSM2891034, GSM2891035, GSM2891036, GSM2891037, GSM2891038, GSM2891039, GSM2891040, GSM2891041, GSM2891042, GSM2891043, GSM2891044, GSM2891045, GSM2891046, GSM2891047, GSM2891048, GSM2891049, GSM2891050, GSM2891051, GSM2891052, GSM2891053, GSM2891054, GSM2891055, GSM2891056, GSM2891057, GSM2891058, GSM2891059, GSM2891060, GSM2891061, GSM2891062, GSM2891063, GSM2891064, GSM2891336, GSM2891337, GSM2891338, GSM2891339, GSM2891340, GSM2891427, GSM2891428, GSM2891429, GSM2891430, GSM2891433, GSM2891434, GSM2891435, GSM2891436, GSM2913003, GSM2913004, GSM2913005, GSM2913006, GSM2913007, GSM2913008, GSM2913009, GSM2931626, GSM2931627, GSM2931628, GSM2931629, GSM2931632, GSM2931633, GSM2936066, GSM2980690, GSM2980691, GSM2980692, GSM2980693, GSM3045444, GSM3045445, GSM3045450, GSM3045451, GSM3073829, GSM3207051, GSM3323461, GSM3589700, GSM3589701, GSM3591415, GSM3591416, GSM3591417, GSM3591418, GSM3747587, GSM3747588, GSM3747589, GSM3747590, GSM4010737, GSM4010738, GSM4010739, GSM4010740, GSM4010741, GSM4010742, GSM4010743, GSM4010774, GSM4010775, GSM4010776, GSM4010777, GSM4010778, GSM4010779, GSM4010780, GSM4010781, GSM4010782, GSM4010783, GSM4010784, GSM4010785, GSM4010786, GSM4010787, GSM4010788, GSM4010789, GSM4010790, GSM4010791, GSM4010792, GSM4010793, GSM4010794, GSM4010795, GSM4010796, GSM4010797, GSM4010798, GSM4010799, GSM4010800, GSM4010801, GSM4010802, GSM4010803, GSM4010804, GSM4100779, GSM4100780, GSM4100781, GSM4100782, GSM4100783, GSM4101821, GSM4101822, GSM4101823, GSM4101824, GSM4101825, GSM4101826, GSM4101827, GSM4101828, GSM4101829, GSM4101830, GSM4101831, GSM4125143, GSM4149798, GSM4149799, GSM4149800, GSM4149801, GSM4149802, GSM4149803, GSM4149804, GSM4149805, GSM4149806, GSM4149807, GSM4149808, GSM4149809, GSM4149810, GSM4149811, GSM4149812, GSM4149813, GSM4149814, GSM4149815, GSM4221401, GSM4221402, GSM4221403, GSM4221404, GSM4221405, GSM4221406, GSM4322903, GSM4432366, GSM4432367, GSM4432368, GSM4494568, GSM4494569, GSM4494570, GSM4494571, GSM4494572, GSM4494573, GSM4494574, GSM4494575, GSM4658255, GSM4658256, GSM4658257, GSM4658258, GSM4658259, GSM4658260, GSM4658261, GSM4658262, GSM4683713, GSM4683714, GSM4683715, GSM4683716, GSM4683717, GSM4683718, GSM4683719, GSM4683720, GSM4683721, GSM4683722, GSM4683723, GSM4683724, GSM4683725, GSM4683726, GSM4683727, GSM4683736, GSM4683737, GSM4683738, GSM4683739, GSM4683740, GSM4683741, GSM4683742, GSM4683743, GSM4683744, GSM4683745, GSM4683746, GSM4683747, GSM4683748, GSM4683749, GSM4683750, GSM4704731, GSM4704732, GSM4704733, GSM4704734, GSM4704735, GSM4704736, GSM4704737, GSM4704738, GSM4704739, GSM4704740, GSM4704741, GSM4704742, GSM4704743, GSM4704744, GSM4704745, GSM4704746, GSM4704747, GSM4704748, GSM4704749, GSM4704750, GSM4704751, GSM4704752, GSM4704753, GSM4704754, GSM4704755, GSM4704756, GSM4704757, GSM4704758, GSM4704759, GSM4704760, GSM4704761, GSM4704762, GSM4704763, GSM4704764, GSM4704765, GSM4704766, GSM4704767, GSM4704768, GSM4704769, GSM4704770, GSM4704771, GSM4704772, GSM4704773, GSM4704774, GSM4704775, GSM4704776, GSM4704777, GSM4704778, GSM4704779, GSM4704780, GSM4704781, GSM4704782, GSM4704783, GSM4704784, GSM4704785, GSM4704786, GSM4704787, GSM4704788, GSM4704789...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
|
| Series (114)
|
| GSE63371 |
Base-resolution detection of N4-methylcytosine in genomic DNA using 4mC-TAB-seq |
| GSE63473 |
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets |
| GSE66694 |
Drop-Seq analysis of ERCC spike in capture |
| GSE80973 |
Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction |
| GSE83992 |
An improved method for identifying biological circular RNAs |
| GSE91395 |
A Trichostatin A expression signature identified by TempO-Seq targeted whole transcriptome profiling |
| GSE93399 |
Modeling bias and variation in the stochastic processes of small RNA sequencing |
| GSE94584 |
Systematic assessment of next-generation sequencing for quantitative small RNA profiling: synthetic equimolar pool |
| GSE94585 |
Systematic assessment of next-generation sequencing for quantitative small RNA profiling: synthetic ratiometric pools |
| GSE94586 |
Systematic assessment of next-generation sequencing for quantitative small RNA profiling: a multiple protocol study across multiple laboratories |
| GSE100135 |
Immuno-Detection by sequencing (ID-seq) enables large-scale high- dimensional phenotyping in cells |
| GSE108138 |
Systematic assessment of next-generation sequencing for quantitative small RNA profiling: A-to-I editing pools |
| GSE108759 |
ERCC TAC-seq |
| GSE109098 |
Spec-seq data for ZFY and its truncated variants |
| GSE109262 |
Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells |
| GSE110110 |
targeted allele counting by sequencing (TAC-seq) |
| GSE110155 |
Spec-seq sequencing data for CTCF [2018 series] |
| GSE111936 |
Comprehensive, high-resolution binding energy landscapes reveal context dependencies of transcription factor binding |
| GSE112599 |
Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons [CRISPR screen] |
| GSE112601 |
Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons |
| GSE116011 |
An Optically Decodable Bead Array for Linking Imaging and Sequencing with Single-Cell Resolution |
| GSE118242 |
Systematic Interrogation of Human Promoters |
| GSE126048 |
Phospho-small RNA-seq reveals circulating, extracellular mRNA/lncRNAs as potential biomarkers in human plasma: PNK evaluation on synthetic, equimolar pool [SYNTHETICPNK] |
| GSE126051 |
Phospho-small RNA-seq reveals circulating, extracellular mRNA/lncRNAs as potential biomarkers in human plasma: |
| GSE126086 |
High-throughput sequencing of Pol IV and RDR2 transcripts, and their DCL3-diced products, generated from an M13mp18 (+) strand DNA template |
| GSE130680 |
DAP-Seq profiling of LHY2 shows night-length information is integrated to determine timing of poplar photoperiodic growth |
| GSE135464 |
Model-driven generation of artificial yeast promoters |
| GSE138130 |
RegSNPs-intron: a computational framework for predicting pathogenic impact of intronic single nucleotide variants |
| GSE138200 |
Template switching by a group II intron reverse transcriptase: biochemical analysis and implications for RNA-seq |
| GSE138950 |
Single cut products of Microprocessor on pri-miRNAs |
| GSE139936 |
Sequencing-based quantitative mapping of the cellular small RNA landscape |
| GSE142140 |
High-throughput in vitro DROSHA processing on human pri-miRNA variants |
| GSE145643 |
Functional characterization of thousands of type 2 diabetes-associated and chromatin-modulating variants under steady state and endoplasmic reticulum stress |
| GSE147504 |
Targeted DMS probing of SF3A3 5' UTR |
| GSE147506 |
Key role of dysregulated SF3A3 translation in MYC-induced breast tumorigenesis |
| GSE148096 |
BT20_24hr_DMSOvERLOTINIB_RNAseq and WHOLE GENOME CRISPR screen |
| GSE149225 |
A Deep Learning Approach For Programmable RNA Switches |
| GSE153897 |
Uncovering the basis of protein-protein interaction specificity with a combinatorially complete library |
| GSE154923 |
Peptide gene sequences of substrate phage for different proteases |
| GSE155455 |
Dissecting the yeast heat shock response by CRISPRi/a |
| GSE155590 |
CRISPRi reveals genes modulating yeast growth in lignocellulose hydrolysate |
| GSE157430 |
TransMPRA sequencing data. |
| GSE159488 |
A versatile platform for locus-scale genome rewriting and verification |
| GSE159989 |
DNA binding specificity for the bHLH-PAS transcription factor family |
| GSE160457 |
An all-to-all approach to the identification of sequence-specific readers for epigenetic DNA modifications on cytosine |
| GSE160954 |
SNRPA1 BindNSeq |
| GSE160957 |
Functional genomics of SNRPA1/B2 |
| GSE161657 |
Identifying non-genetic determinants of malignant clonal fitness at single cell resolution (primary leukaemia barcode-seq) |
| GSE161676 |
Identifying non-genetic determinants of malignant clonal fitness at single cell resolution |
| GSE162038 |
Genome-scale identification of SARS-CoV-2 and pan-coronavirus host factor networks |
| GSE162039 |
Functional interrogation of a SARS-CoV-2 host protein interactome identifies unique and shared coronavirus host factors |
| GSE163934 |
Coagulation Factor XIII-Binding Aptamers as Bivalent Ligands Targeting Fibrin and Activated Platelets in the Thrombus |
| GSE171049 |
Chemical capping improves template switching and enhances sequencing of small RNAs |
| GSE178811 |
DNA Binding Specificities of Fkh1, Fkh2, Hcm1, and Fhl1 Revealed by SELEX-seq |
| GSE180153 |
Sequence determinants of human gene regulatory elements, STARR-seq random enhancer experiments |
| GSE180158 |
Sequence determinants of human gene regulatory elements |
| GSE185524 |
Intramolecular ligation method (iLIME) for pre-miRNA quantification and sequencing |
| GSE186464 |
N1-methylpseudouridine found within COVID-19 mRNA vaccines produces faithful protein products |
| GSE188164 |
Spec-seq sequencing data for CTCF [2021 series] |
| GSE188166 |
CTCF Spec-seq |
| GSE188569 |
Integrated clinical and genomic evaluation of guadecitabine (SGI-110) in peripheral T-cell lymphoma [CRISPR screen] |
| GSE188571 |
Integrated clinical and genomic evaluation of guadecitabine (SGI-110) in peripheral T-cell lymphoma |
| GSE189181 |
Ubiquitous mRNA decay fragments in E. coli redefine the functional transcriptome |
| GSE189817 |
Spec-seq data for ZNF140, ZNF10, ZFP3, ZNF675, ZNF382 |
| GSE190288 |
Sequence properties of human acidic transcriptional activation domains |
| GSE193224 |
A giant virus genome is densely packaged by stable nucleosomes |
| GSE195979 |
Direct tracking of reverse-transcriptase speed and template sensitivity: implications for sequencing and analysis of long RNA molecules |
| GSE198433 |
Paired single-cell host profiling with multiplex-tagged bacterial mutants reveals intracellular virulence-immune networks I |
| GSE198728 |
Paired single-cell host profiling with multiplex-tagged bacterial mutants reveals intracellular virulence-immune networks |
| GSE200758 |
RNA sequencing unveils very small RNAs with potential regulatory functions in bacteria |
| GSE207900 |
Genome-wide reporter screen for transcriptional regulators of ribosome biogenesis genes and ribosomal protein genes |
| GSE210051 |
DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy [DNA barcodes: IT_and_cont_4T1_BC250000] |
| GSE210057 |
DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy |
| GSE211183 |
In vitro transcriptomic analyses reveal pathway perturbations, estrogenic activities, and potencies of data-poor BPA alternative chemicals |
| GSE215347 |
Chromatin complex dependencies reveal novel targeting opportunities in leukemia [300K] |
| GSE215348 |
Chromatin complex dependencies reveal targeting opportunities in leukemia |
| GSE216091 |
Targeting MYC effector functions in pancreatic cancer by inhibiting the ATPase RUVBL1/2 (Screen) |
| GSE216095 |
Targeting MYC effector functions in pancreatic cancer by inhibiting the ATPase RUVBL1/2 |
| GSE218478 |
Widespread perturbation of ETS factor binding sites in cancer |
| GSE220183 |
FUBP1 is a core splicing factor that facilitates 3' splice site recognition and splicing of long introns [In vitro iCLIP] |
| GSE220186 |
FUBP1 is a core splicing factor that facilitates 3' splice site recognition and splicing of long introns |
| GSE221924 |
PFKFB3 overexpression in monocytes of patients with colon but not rectal cancer programs pro-tumor macrophages and is indicative for higher risk of tumor relapse [GeoMx] |
| GSE221926 |
PFKFB3 overexpression in monocytes of patients with colon but not rectal cancer programs pro-tumor macrophages and is indicative for higher risk of tumor relapse |
| GSE224951 |
Systematic surveillance of SARS-CoV-2 reveals dynamics of variant mutagenesis and transmission in a large urban population I |
| GSE225867 |
Transcription factor interactions explain the context-dependent activity of CRX binding sites |
| GSE230090 |
Transcriptional activity of an MPRA library containing sequences of genomic origin bound by the transcription factor CRX measured in retinas from mice carrying pathogenic CRX variants |
| GSE231415 |
Systematic surveillance of SARS-CoV-2 reveals dynamics of variant mutagenesis and transmission in a large urban population II |
| GSE231416 |
Systematic surveillance of SARS-CoV-2 reveals dynamics of variant mutagenesis and transmission in a large urban population |
| GSE232228 |
Prediction of on-target and off-target activity of CRISPR-Cas13dguide RNAs using deep learning |
| GSE233343 |
A ligation-independent sequencing method reveals tRNA fragments with blocked 3' termini |
| GSE235588 |
Loss of PTDSS1 in tumor cells improves immunogenicity and response to anti-PD-1 therapy [AmpSeq] |
| GSE237551 |
Macrophage Mannose receptor (MRC1) mediates uptake of dextran in murine bone-marrow derived macrophages via a receptor-mediated endocytic process |
| GSE239954 |
Characterization of group I introns in generating circular RNAs as vaccines |
| GSE243758 |
Selective DNA-PK inhibition enhances chemotherapy and ionizing radiation activity in soft-tissue sarcomas |
| GSE246819 |
Systematic surveillance of SARS-CoV-2 reveals dynamics of variant mutagenesis and transmission in a large urban population III |
| GSE250601 |
Transcription factor genomic occupancy is determined by multiple, overlapping DNA binding sites |
| GSE254618 |
A mutational atlas for Parkin |
| GSE254639 |
Deep mutational scanning reveals a tight correlation between protein degradation and toxicity of thousands of non-native aspartoacylase protein variants |
| GSE262060 |
Functional activity scores of a DMS library representing coding single residue substitution variants in the transcription factor CRX measured in an engineered reporter cell line |
| GSE262560 |
Understanding species-specific and conserved RNA-protein interactions in vivo and in vitro |
| GSE266263 |
Designing Molecular RNA Switches with Restricted Boltzmann Machines |
| GSE266802 |
pooled clone sequencing from DNA cloning sample (ENCSR271KLC) |
| GSE266803 |
pooled clone sequencing from DNA cloning sample (ENCSR273YHW) |
| GSE266806 |
pooled clone sequencing from DNA cloning sample (ENCSR367WAO) |
| GSE266810 |
pooled clone sequencing from DNA cloning sample (ENCSR448FBS) |
| GSE266811 |
pooled clone sequencing from DNA cloning sample (ENCSR466AMS) |
| GSE266830 |
pooled clone sequencing from DNA cloning sample (ENCSR721WTZ) |
| GSE266831 |
pooled clone sequencing from DNA cloning sample (ENCSR732JTP) |
| GSE266844 |
pooled clone sequencing from DNA cloning sample (ENCSR992PQH) |
| GSE274255 |
Sensitive dissection of a genomic regulatory landscape using bulk and targeted single-cell activation [bulkCRISPR-screen] |
| GSE280076 |
Dissecting RNA Selectivity Mediated by Tandem RNA-Binding Domains |
| GSE286306 |
A detailed analysis of second and third generation sequencing approaches for accurate length determination of short tandem repeats and homopolymers [TypeI_Illumina] |
| GSE286307 |
A detailed analysis of second and third generation sequencing approaches for accurate length determination of short tandem repeats and homopolymers [TypeII_Illumina] |
| GSE286308 |
A detailed analysis of second and third generation sequencing approaches for accurate length determination of short tandem repeats and homopolymers [TypeIII_Illumina] |
|
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...