| GSE59176 |
Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth |
| GSE60034 |
Dynamic landscape of RNA structures in vivo reveals principles of post-transcriptional regulation [icSHAPE] |
| GSE60188 |
Regulation of the core pre-mRNA splicing machinery by MYC and PRMT5 is essential to sustain lymphomagenesis [B-cells] |
| GSE60604 |
An alternative pluripotent state confers interspecies chimaeric competency [ChIP-seq] |
| GSE60605 |
An alternative pluripotent state confers interspecies chimaeric competency |
| GSE60738 |
Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq |
| GSE61125 |
Transcriptional and Epigenomic profile of GSK126 or dox-mediated Ezh2 inhibition in KrasG12D/+;Trp53-/-;Ezh2i-GFP-2A-rTA;Luc lung tumors in vivo |
| GSE61300 |
High throughput quantitative whole transcriptome analysis of CC10- B4+ and Krt5-CreERT2 - labeled distal lung cells |
| GSE61638 |
Regulation of the core pre-mRNA splicing machinery by MYC and PRMT5 is essential to sustain lymphomagenesis |
| GSE61673 |
Nkx2.2, Nkx6.1, Olig2, and Gli3 genomic binding regions in neural progenitors [ChIP-Seq] |
| GSE62270 |
Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell Types |
| GSE62631 |
Single-base resolution analysis of active DNA demethylation using methylase-assisted bisulfite sequencing |
| GSE62633 |
Transcription Factors GATA4 and HNF4A Control Distinct Aspects of Intestinal Homeostasis in Conjunction With the Transcription Factor CDX2 |
| GSE62784 |
Cell-autonomous transformation of Lgr5-positive intestinal stem cells into gastric stem cells upon loss of transcription factor Cdx2 |
| GSE63325 |
The cohesin associated factor Wapal is required for proper polycomb-mediated gene silencing |
| GSE63472 |
Drop-Seq analysis of P14 mouse retina single-cell suspension |
| GSE63473 |
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets |
| GSE63968 |
A survey of imprinted gene expression in mouse trophoblast stem cells |
| GSE64169 |
Dynamic landscape of RNA structures in vivo reveals principles of post-transcriptional regulation |
| GSE64447 |
Neonatal Skeletal Progenitors |
| GSE64684 |
Extensive Nuclear Reprogramming Underlies Lineage Conversion into Functional Trophoblast Stem-like Cells |
| GSE64825 |
Genome-wide distribution and function of ATP-dependent chromatin remodelers in embryonic stem cells |
| GSE65167 |
ChIP-seq analysis of Arid1a and C/ebpα in the mouse livers |
| GSE65360 |
Single-cell chromatin accessibility data using scATAC-seq |
| GSE65457 |
mRNAseq analysis of Nkx2.2, Nkx6.1, and Olig2 overexpression in neural progenitors |
| GSE65462 |
Nkx2.2, Nkx6.1, Olig2, and Gli3 genomic binding regions and overexpression in neural progenitors |
| GSE65525 |
Droplet barcoding for single cell transcriptomics applied to embryonic stem cells |
| GSE65970 |
Troy+ brain stem cells cycle through quiescence and regulate their number by sensing niche occupancy |
| GSE66345 |
A Circult Mechanism for Differentiating Positive and Negative Associations |
| GSE66364 |
PML protein organizes heterochromatin domains where it regulates histone H3.3 deposition by ATRX/DAXX |
| GSE66847 |
Dynamics of 5-hmC in cardiac maturation and hypertrophy |
| GSE67310 |
Dissecting the direct reprogramming path of fibroblasts into neurons by single cell RNA-sequencing |
| GSE67828 |
Profiling of soma and neurite transcriptomes |
| GSE67852 |
Genome-wide maps of BAF180 and REV-ERBα binding |
| GSE67860 |
Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude through REV-ERB Loading |
| GSE67955 |
The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation |
| GSE68582 |
Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State During Somatic Cell Reprogramming |
| GSE68617 |
Trim33 binds and silences a class of young endogenous retroviruses in the mouse testis |
| GSE68958 |
RUNX1B expression distinguishes megakaryocytic and erythroid lineage fate in adult hematopoiesis |
| GSE68964 |
Genome-wide binding of GATA1 and TAL1 determined at high resolution |
| GSE69054 |
An Nfic-Hedgehog Signaling Cascade Regulates Tooth Root Development |
| GSE69080 |
Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development (RNA-seq) |
| GSE69101 |
Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development |
| GSE69139 |
7SK-BAF axis controls pervasive transcription at enhancers [ATAC-Seq] |
| GSE69140 |
7SK-BAF axis controls pervasive transcription at enhancers [ChIP-Seq] |
| GSE69142 |
7SK-BAF axis controls pervasive transcription at enhancers [GRO-Seq] |
| GSE69143 |
7SK-BAF axis controls pervasive transcription at enhancers |
| GSE69227 |
Combined heterozygous loss of Ebf1 and Pax5 allows for T-lineage conversion of B-cell progenitors |
| GSE69483 |
Control of stomach smooth muscle development and intestinal rotation by transcription factor BARX1 (ChIP-seq) |
| GSE69669 |
Roles of Yap1 in mouse embryonic stem cells |
| GSE69889 |
Genome-wide Circadian Control of Transcription at Active Enhancers Regulates Insulin Secretion and Diabetes Risk |
| GSE69968 |
RNA-Sequencing of primary myoblasts from mice with a satellite cell specific knockout of the histone demthylase UTX/KDM6A |
| GSE69970 |
Transcriptome of mouse preimplantation development [Rlim KO] |
| GSE70045 |
Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer [ChIP-Seq] |
| GSE70046 |
Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer [RNA-Seq] |
| GSE70047 |
Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer |
| GSE70110 |
DDX5 and its associated lncRNA Rmrp modulate Th17 cell effector functions |
| GSE70510 |
Low and high dose TLR4 stimulation in bone-marrow derived mouse macrophages |
| GSE70766 |
Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells |
| GSE70960 |
Pancreatic Beta-Cell Enhancers Regulate Rhythmic Transcription of Exocyst Triggering and Diabetes [ChIP-seq] |
| GSE70961 |
Pancreatic Beta Cell Enhancers Regulate Rhythmic Transcription of Exocyst Triggering and Diabetes |
| GSE70981 |
Blimp1 controls plasma cell physiology and function |
| GSE71156 |
Allele-specific ATAC-seq |
| GSE71215 |
How C/EBPa creates an elite cell state for reprogramming to pluripotency [ChIPseq] |
| GSE71218 |
How C/EBPa creates an elite cell state for reprogramming to pluripotency |
| GSE71442 |
Transcriptome of mouse preimplantation development |
| GSE71453 |
Single cell RNA-seq analysis of sensory neurons reveal diverse injury responses after sciatic nerve transection |
| GSE71708 |
Mammalian Heat Shock Response And Mechanisms Underlying Its Genome-wide Transcriptional Regulation |
| GSE71713 |
Acquired tissue-specific promoter bivalency is a basis for PRC2 necessity in adult somatic cells |
| GSE71744 |
Lineage-specific functions of TET1 in the post-implantation mouse embryo |
| GSE71794 |
Notch Activation Confers Enhanced Lymphoid Potential in Murine ESC/iPSC-derived HSC and Reconstitutes Adaptive Immunity In Vivo [RNA-Seq] |
| GSE71796 |
Notch Activation Confers Enhanced Lymphoid Potential in Murine ESC/iPSC-derived HSC and Reconstitutes Adaptive Immunity In Vivo |
| GSE71947 |
Pioneer transcription factor FoxA maintains an open nucleosome configuration for tissue-specific gene activation [MNase-Seq] |
| GSE72084 |
Characterization of chromatin and gene expression changes during fasting in mouse liver [ChIP-Seq] |
| GSE72087 |
Characterization of chromatin and gene expression changes during fasting in mouse liver |
| GSE72164 |
Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency |
| GSE72237 |
Genome-wide H2B monoubiquitination regulates gene expression by coordinating H3K4me3 and H3K27me3 [ChIP-Seq Data Set] |
| GSE72239 |
Genome-wide H2B monoubiquitination regulates gene expression by coordinating H3K4me3 and H3K27me3 |
| GSE72286 |
Mtf2-PRC2 control of canonical Wnt signaling is required for definitive erythropoiesis [RNA-Seq] |
| GSE72287 |
Mtf2-PRC2 control of canonical Wnt signaling is required for definitive erythropoiesis. [ChIP-seq] |
| GSE72288 |
Mtf2-PRC2 control of canonical Wnt signaling is required for definitive erythropoiesis |
| GSE72432 |
Brain neuronal cell nuclei with exceptionally high levels of hydroxymethylcytosine |
| GSE72442 |
Chd8 mediates cortical neurogenesis through transcriptional regulation of cell cycle and Wnt signaling genes |
| GSE72494 |
Effector regulatory T cell differentiation and immune homeostasis depend on the transcription factor Myb |
| GSE72539 |
CTCF binding polarity determines chromatin looping [4C] |
| GSE72599 |
7SK-BAF axis controls pervasive transcription at enhancers [icShape] |
| GSE72720 |
CTCF binding polarity determines chromatin looping |
| GSE72851 |
Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [ART-seq] |
| GSE72852 |
Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [CAPIP-seq] |
| GSE72853 |
Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [ChIP-seq] |
| GSE72854 |
Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [DECAP-seq] |
| GSE72855 |
Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [RNA-seq] |
| GSE72856 |
Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies |
| GSE72857 |
Transcriptional heterogeneity and lineage commitment in myeloid progenitors [single cell RNA-seq] |
| GSE72858 |
Transcriptional heterogeneity and lineage commitment in myeloid progenitors [ChIP-seq] |
| GSE72859 |
Transcriptional heterogeneity and lineage commitment in myeloid progenitors |
| GSE72860 |
Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitates aberrant DNA methylation and gene expression |
| GSE72892 |
FOXO1 Regulates Attachment of the Implanting Blastocyst to the Endometrium at the Window of Receptivity [ChIP-seq] |
| GSE72896 |
FOXO1 Regulates Attachment of the Implanting Blastocyst to the Endometrium at the Window of Receptivity |
| GSE72910 |
Exploiting Temporal Collateral Sensitivity in Tumor Clonal Evolution |
| GSE72941 |
RNA-seq analysis reveals profound changes in transcript profiles between siCon- and siH19-transfected myotubes |
| GSE72964 |
Tissue damage signals repurpose NF-κB, AP-1 and Smad3 to direct a Rev-erb sensitive wound healing program in macrophages |
| GSE73014 |
Genome-wide DNA-methylation and transcriptome change due to lncRNA H19 knockdown in myotubes |
| GSE73065 |
High-throughput single-base resolution mapping of 2’-O-Methylated residues |
| GSE73215 |
Dose-dependent role of the cohesin complex in normal and malignant hematopoiesis [ATAC-Seq] |
| GSE73218 |
Dose-dependent role of the cohesin complex in normal and malignant hematopoiesis |
| GSE73262 |
Core pathway mutations induce de-differentiation of murine astrocytes into glioblastoma stem cells that are sensitive to radiation, but resistant to temozolomide (FAIRE-seq) |
| GSE73357 |
Heterogeneous ribosomes exist and selectively translate distinct subpools of mRNAs in stem cells |
| GSE73372 |
AP-1 family members act at DNA targets in conjunction with Sox9 to promote chondrocyte hypertrophy |
| GSE73692 |
Genome-wide mapping of PRDM15 binding in pluripotent mouse Embryonic Stem Cells (mESCs) |
| GSE73693 |
Whole transcriptome sequencing of WT and PRDM15KO mESCs |
| GSE73694 |
PRDM15 safeguards naïve pluripotency by transcriptionally regulating WNT and MAPK/ERK signaling |
| GSE73721 |
RNA-Seq of human astrocytes |
| GSE73845 |
Functional characterization of RNA-binding protein IMP2 in primary Glioma cell lines [HTS] |
| GSE73847 |
Functional characterization of RNA-binding protein IMP2 in primary Glioma cell lines |
| GSE73865 |
Genome-wide map of SIX2 and SIX1 binding in human embryonic kidney cortex |
| GSE73867 |
Nephron endowment |
| GSE73881 |
Transcriptome analysis of ATRX and DAXX knockout mouse ESC |
| GSE73909 |
Chronic cardiac contractile dysfunction without hypertrophy does not provoke a compensatory transcriptional response |
| GSE73912 |
Next Generation Sequencing Facilitates Quantitative Analysis of RNAs bound by DDX5 and RORgt in cultured T helper 17 cell [ChIRP-Seq] |
| GSE74017 |
Acute myeloid leukemia requires Hhex to enable PRC2-mediated epigenetic repression of Cdkn2a (ChIP-Seq) |
| GSE74019 |
Acute myeloid leukemia requires Hhex to enable PRC2-mediated epigenetic repression of Cdkn2a |
| GSE74315 |
Pet-1 Switches Transcriptional Targets Postnatally to Regulate Maturation of Serotonin Neuron Excitability. |
| GSE74353 |
RNA duplex map in living cells reveals higher order transcriptome structure |
| GSE74359 |
A multiplexed system for quantitative comparisons of chromatin landscapes |
| GSE74547 |
ETO Family Protein Mtgr1 Mediates Prdm14 Functions in Stem Cell Maintenance |
| GSE74552 |
Transcriptional profiling of post-positive selection thymocytes from HOIL- and SHARPIN-deficient mice |
| GSE74923 |
A microfluidic platform enabling single cell RNA-seq of multigenerational lineages |
| GSE75176 |
Comparison of expression profiles of WT and Nrf2AY/AY mutant macrophages under electrophilic stress agent [RNA-Seq] |
| GSE75177 |
Comparison of expression profiles of WT and Nrf2AY/AY mutant macrophages under electrophilic stress agent |
| GSE75187 |
Ezh2 and Runx1 Mutations Targeted to Early Lymphoid Progenitors Collaborate to Promote Early Thymic Progenitor Leukemia [RNA-Seq 2] |
| GSE75188 |
Ezh2 and Runx1 Mutations Targeted to Early Lymphoid Progenitors Collaborate to Promote Early Thymic Progenitor Leukemia |
| GSE75209 |
Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing [halofuginone] |
| GSE75210 |
Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing [myd88] |
| GSE75211 |
Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing [SM screen] |
| GSE75212 |
Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing |
| GSE75250 |
Genome-wide profilings of IFN-stimulated murine splenic B cells by ChIP-seq. |
| GSE75306 |
ImmGen Cytokines: Interferons |
| GSE75323 |
Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome |
| GSE75386 |
Single cell RNAseq of electrophysiologically characterized neurons of the hippocampus |
| GSE75390 |
DNase-seq analysis of B3 pre-B cell line from STATegra Project |
| GSE75395 |
Omics analyses of B3 pre-B cell line from STATegra Project |
| GSE75426 |
Local compartment changes and regulatory landscape alterations in histone H1-depleted cells |
| GSE75477 |
Genome-wide analysis of chronic inflammation induced gene expression in livers isolated from either wild type or ApoE-Cyp7a1 transgenic animals. |
| GSE75484 |
Effect of PD-1 immune checkpoint in Alzheimer's disease transgenic mice |
| GSE75525 |
Epigenetic profiling of mouse bone marrow derived mast cells (BMMCs) [ChIP-seq] |
| GSE75526 |
Transcriptomic profiling of bone marrow derived mast cells (BMMCs) [RNA-seq] |
| GSE75589 |
Core pathway mutations induce de-differentiation of murine astrocytes into glioblastoma stem cells that are sensitive to radiation, but resistant to temozolomide (RNA-seq) |
| GSE75592 |
Core pathway mutations induce de-differentiation of murine astrocytes into glioblastoma stem cells that are sensitive to radiation, but resistant to temozolomide |
| GSE75622 |
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals |
| GSE75684 |
RNA binds to a CBP regulatory motif to stimulate histone acetylation and transcription |
| GSE75691 |
Transcriptomic and behavioural characterisation of a mouse model of burns pain |
| GSE75765 |
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals (single embryo) |
| GSE75767 |
Type I and type II interferon coordinately regulate suppressive dendritic cell fate and function during viral persistence |
| GSE75769 |
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals (ICSI) |
| GSE75786 |
Loss of Asxl1 Alters Mesenchymal Stem Cell Fate through H3K4me3 [ChIP-seq] |
| GSE75788 |
Loss of Asxl1 Alters Mesenchymal Stem Cell Fate through H3K4me3 |
| GSE75816 |
Medial prefrontal cortex transcriptome changes in germ-free mice |
| GSE75851 |
ILC progenitor CEL-seq |
| GSE75880 |
Unlinking a lncRNA from its associated cis element [Capture-C] |
| GSE75881 |
Unlinking a lncRNA from its associated cis element |
| GSE75936 |
Gene expression profiles of Id3lo and Id3hi regulatory T cells |
| GSE75951 |
Transcriptome of mouse preimplantation development [Xist KO] |
| GSE75976 |
Ikaros-regulated genes in a mouse model of BCR-ABL1+ acute lymphoblastic leukemia |
| GSE76097 |
In vivo analysis of astrocyte ribosome-associated mRNA after traumatic spinal cord injury |
| GSE76133 |
Next generation sequencing analysis of epididymal adipose tissue (I) |
| GSE76134 |
A pre-mRNA Alternative Splicing Program Promotes Adipose Tissue Thermogenesis |
| GSE76174 |
Cause and consequence of tethering a sub-TAD to different nuclear compartments |
| GSE76185 |
Sp7/Osterix is restricted to bone-forming vertebrates where it acts as a Dlx co-factor in osteoblast specification [ChIP-Seq] |
| GSE76187 |
Sp7/Osterix is restricted to bone-forming vertebrates where it acts as a Dlx co-factor in osteoblast specification |
| GSE76217 |
RNA-SEQ on resting (R) and stimulated (S) B cells from several IgH 3'RR mutant models |
| GSE76239 |
SWI-SNF-like fetal gene reprogramming dynamically regulates epicardial progenitor activity |
| GSE76248 |
MiCEE: a ncRNA-protein complex mediates epigenetic silencing and nucleolus organization |
| GSE76317 |
Next generation sequencing analysis of epididymal adipose tissue (III) |
| GSE76359 |
Deciphering the importance of the palindromic architecture of the immunoglobulin heavy chain 3’ regulatory region. |
| GSE76408 |
Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage |
| GSE76419 |
Dino-dependent gene expression signature in MEFs |
| GSE76420 |
LncRNA DINO guides DNA damage signaling |
| GSE76478 |
Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming [ChIP-Seq] |
| GSE76481 |
Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming |
| GSE76539 |
AF9/MLLT3 ChIP-Seq in LPS-stimulated RAW264.7 cells |
| GSE76569 |
Fbxl19 recruits Rnf20 to CpG Islands and promotes H2B mono-ubiquitination [ChIP-Seq] |
| GSE76570 |
Fbxl19 recruits Rnf20 to CpG Islands and promotes H2B mono-ubiquitination |
| GSE76850 |
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory [ChIP-seq] |
| GSE76853 |
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory [RNA-seq] |
| GSE76854 |
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory |
| GSE76909 |
Widely Interspaced Zinc Finger Motifs, Wiz, binds active promoters and CTCF-binding sites and is required for normal neural function in the mouse |
| GSE76926 |
RNA-seq transcriptonal profiling in partial hepatectomy liver tissues in Arid1a WT and liver specific KO mice. |
| GSE76927 |
ChIP-seq analysis of E2f4, H3K4me2 and H3K27ac in the mouse livers |
| GSE76934 |
Reversible transitions between transformed and differentiated states in AML |
| GSE76935 |
Suppression of SWI/SNF component Arid1a promotes mammalian regeneration through chromatin remodeling |
| GSE76983 |
Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cells |
| GSE77107 |
Plasticity between Epithelial and Mesenchymal States Unlinks EMT from Metastasis-Enhancing Stem Cell Capacity |
| GSE77204 |
Cell-type dependent enhancer binding of the EWS/ATF1 fusion gene in clear cell sarcomas |
| GSE77205 |
Cell-type dependent enhancer binding of the EWS/ATF1 fusion gene in clear cell sarcomas |
| GSE77323 |
p62, upregulated during preneoplasia, induces hepatocellular carcinogenesis by maintaining survival of stressed HCC-initiating cells |
| GSE77328 |
OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors |
| GSE77447 |
In vivo genome-wide profiling reveals a tissue-specific role for 5-formylcytosine |
| GSE77514 |
RNA sequencing identifies differentially expressed genes in embryonic cardiomyocytes following knockdown of DNMT3a or DNMT3b expression |
| GSE77543 |
Dynamics of NRSF/REST motif evolution favor the canonical NRSE/RE1 form |
| GSE77553 |
Capturing pairwise and multi-way chromosomal conformations using C-walks |
| GSE77670 |
Pioneer transcription factor FoxA maintains an accessible nucleosome configuration at enhancers for tissue-specific gene activation [ChIP-seq] |
| GSE77681 |
C9orf72 is required for proper macrophage and microglial function in mice |
| GSE78045 |
p53 is a critical regulator of airway epithelial progenitor cell homeostasis. |
| GSE78073 |
Oct4 ChIP-Seq at G1 and G2/M phase of cell cycle in mouse embryonic stem cells |
| GSE78163 |
Ligation-Free Ribosome Profiling Reveals Cell Type-Specific Regulation of Protein Synthesis in the Brain |
| GSE78505 |
Regulation of Th17 cell pathogenic function by miR-183/96/182 |
| GSE78521 |
Transcriptomes of individual substantia nigra pars reticulata neurons |
| GSE78688 |
Activity-dependent transcriptional changes in human neurons |
| GSE78708 |
Not All H3K4 methylations are Created Equal: Mll2/COMPASS Dependency in Primordial Germ Cell Specification |
| GSE78760 |
p62/SQSTM1 by binding to vitamin D receptor inhibits hepatic stellate cell activity, fibrosis and liver cancer |
| GSE78800 |
Dissection of a super-enhancer in vivo (ATAC-seq) |
| GSE78803 |
Dissection of a super-enhancer in vivo (Capture-C) |
| GSE78804 |
Dissection of a super-enhancer in vivo (ChIP-seq) |
| GSE78826 |
The cohesin associated protein Wapal is required for proper polycomb-mediated gene silencing [Ring1b ChIP-seq] |
| GSE78835 |
Genetic dissection of the α-globin super-enhancer |
| GSE78873 |
A long noncoding RNA lincRNA-EPS acts as a transcriptional brake to restrain inflammation |
| GSE78996 |
Characterisation of Transcriptional Changes in the Spinal Cord of the Progressive Experimental Autoimmune Encephalomyelitis ABH Mouse Model by RNA Sequencing |
| GSE79013 |
RNA sequencing identifies differentially expressed genes in adult left ventricles following in utero caffeine exposure during embryonic day 6.5-9.5 |
| GSE79062 |
ATAC-seq of sorted lung cDCs (conventional dendritic cells) from cell-specific MyD88 KO at 0h and 6h in vivo sensitization with OVA/standard flagellin |
| GSE79068 |
Interleukin 4 induces apoptosis of acute myeloid leukemia cells in a Stat6-dependent manner |
| GSE79095 |
Alternative splicing regulation by homologous Muscleblind proteins |
| GSE79108 |
Identification of preoptic sleep-promoting neurons based on projection target |
| GSE79319 |
H3K27me3 ChIP-sequencing on LSK (Lin-Sca-1+c-kit+) cells isolated from control, MxCre Jak2VF/+ and MxCre Jak2VF/+ EZH2-/- mice |
| GSE79320 |
AP-1 and TEAD4 co-operatively promote the vascular program during hemangioblast specification [ChIP-Seq] |
| GSE79352 |
The dynamic translatome of retinal ganglion cell axons during assembly and maintenance of the mouse visual system |
| GSE79457 |
Converting adult pancreatic α-cells into β-cells by targeting Dnmt1 and Arx |
| GSE79472 |
Loss of Ezh2 cooperates with Jak2V617F in the development of myelofibrosis in a mouse model of myeloproliferative neoplasm |
| GSE79519 |
The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions [RNA-seq] |
| GSE79520 |
The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions. |
| GSE79600 |
Memory CD8+ T cells require stress-levels of acetate for optimal function |
| GSE79615 |
MYD88-dependent dendritic and epithelial cell crosstalk in the lung orchestrates immune responses to inhaled allergens |
| GSE79791 |
BMP (Bone morphogenetic protein) signaling network regulates mesenchymal stem cell lineage commitment during tooth development |
| GSE79812 |
Microglia development follows a stepwise program to regulate brain homeostasis - RNA seq |
| GSE79816 |
Microglia development follows a stepwise program to regulate brain homeostasis - ChIP-seq |
| GSE79818 |
Microglia development follows a stepwise program to regulate brain homeostasis - Single Cell RNA-seq |
| GSE79819 |
Microglia development follows a stepwise program to regulate brain homeostasis |
| GSE79826 |
Genome-wide map of HIRA binding sites in the mouse embryonic heart at E12.5 |
| GSE79865 |
Identification of microRNAs with the potential role in progression of thioacetamide-induced liver fibrosis in mouse |
| GSE79883 |
Gene expression profiling during cardiac maturation, hypertrophy and after KD of TET2 |
| GSE79903 |
The transcription factor Zeb2 regulates development of conventional and plasmacytoid DCs by repressing Id2 |
| GSE79937 |
Mesp1Cre;Hira-/fl and Mesp1Cre;Hira+/fl in heart at E11.5 and E12.5 |
| GSE80154 |
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma |
| GSE80231 |
Sp7/Osterix is restricted to bone-forming vertebrates where it acts as a Dlx co-factor in osteoblast specification [ChIP-Seq 2] |
| GSE80232 |
Smart-seq2 analysis of P17 FACS sorted retinal cells from the Tg(Chx10-EGFP/cre,-ALPP)2Clc or Vsx2-GFP transgenic line |
| GSE80321 |
A multi-step transcriptional and chromatin cascade underlies motor neuron programming (transcription factor ChIP-seq) |
| GSE80354 |
Gata6 promotes hair follicle matrix progenitor cell renewal by genome maintenance via Edaradd/NF-κB |
| GSE80483 |
A multi-step transcriptional and chromatin cascade underlies motor neuron programming |
| GSE80511 |
A multi-step transcriptional and chromatin cascade underlies motor neuron programming (ATAC-Seq) |
| GSE80527 |
The BET protein BRD2 cooperates with CTCF to enforce a transcriptional boundary |
| GSE80583 |
Chd5 regulates a ribosome biogenesis switch controlling neural cell fate specification |
| GSE80597 |
Fetal and adult progenitors give rise to unique populations of CD8+ T cells |
| GSE80636 |
Producing enteroendocrine cells from Lgr5+ intestinal stem cells by manipulating quiescence |
| GSE80708 |
An ES cell–specific NuRD complex functions through interaction with Wdr5 |
| GSE80973 |
Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction |
| GSE81203 |
Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos |
| GSE81222 |
Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease |
| GSE81316 |
Transgenic Expression Of Mitochondrial Chaperone Trap1 Accelerates Prostate Cancer Development |
| GSE81446 |
RNA sequencing identifies differentially expressed genes in embryonic cardiomyocytes following knockdown of DNMT1 expression for 72 h |
| GSE81466 |
SOX7 supresses the expression of RUNX1 target genes during EHT |
| GSE81467 |
The transcription factor Gli3 promotes B cell development in the fetal liver through repression of Shh |
| GSE81783 |
Unexpected role of interferon-g in regulating neuronal connectivity and social behavior |
| GSE81799 |
Maintenance of Mammalian Stem Cell States by Honeybee Royalactin |
| GSE81803 |
RNA-sequencing in WT and Fmr1-/- (KO) neurons treated with Jq1 and THZ |
| GSE81849 |
mRNA cap methylation in pluripotency and differentiation |
| GSE81882 |
Identification of a distinct IL-10 producing subset of innate lymphoid type-2 effector cells with regulatory potential |
| GSE81904 |
Drop-Seq analysis of P17 FACS sorted retinal cells from the Tg(Chx10-EGFP/cre,-ALPP)2Clc or Vsx2-GFP transgenic line |
| GSE81905 |
Single cell RNA-sequencing of retinal bipolar cells |
| GSE81911 |
ChIP-sequencing of histone marks in WT and Fmr1-/- (KO) neurons and mice |
| GSE81912 |
Fragile X Syndrome causes epigenetic disruptions treatable with BET inhibitor Jq1 |
| GSE81947 |
Quantifying differentially abundant RNA transcripts in mouse kidney tissue with chronic alcohol consumption |
| GSE82000 |
Transcriptional analysis of rescue of Tfr-mediated B cell suppression with IL-21 |
| GSE82001 |
ATACseq to determine chromatin accessibility in activated or Tfr-suppressed B cells |
| GSE82003 |
TFR Cell Suppression Leads to Durable and Selective Inhibition of B Cell Effector Functions |
| GSE82014 |
Neuronal activity modifies the chromatin accessibility landscape in the adult brain (RNA-Seq OE) |
| GSE82015 |
Neuronal activity modifies the chromatin accessibility landscape in the adult brain |
| GSE82068 |
Negative allosteric modulation of mGluR5 partially corrects pathophysiology in a mouse model of Rett Syndrome |
| GSE82072 |
Next Generation Sequencing of megakaryocyte-erythrocyte progenitor cells (MEPs) with or without mutations in JAK2 and Ezh2 |
| GSE82074 |
Loss of Ezh2 synergizes with JAK2-V617F in initiating myeloproliferative neoplasms and promoting myelofibrosis |
| GSE82157 |
Murine myeloid response to experimental fibrosis |
| GSE82158 |
Ontogeny of alveolar macrophages is a critical determinant of function during lung fibrosis [RNA-seq] |
| GSE82187 |
Cellular Taxonomy of the Mouse Striatum as Revealed by Single-Cell RNAseq |
| GSE82199 |
LTR-retrotransposon control by tRNA-derived small RNA |
| GSE83093 |
RBYP stimulates PRC1 to shape chromatin-based communication between polycomb repressive complexes [calChIP-seq] |
| GSE83094 |
RBYP stimulates PRC1 to shape chromatin-based communication between polycomb repressive complexes [ChIP-seq] |
| GSE83134 |
RBYP stimulates PRC1 to shape chromatin-based communication between polycomb repressive complexes [RNA-seq] |
| GSE83135 |
RBYP stimulates PRC1 to shape chromatin-based communication between polycomb repressive complexes |
| GSE83145 |
RNA profiling of testis from wild-type and tamoxifen-induced NIPP1 knockout mice |
| GSE83163 |
DNase-seq from heart (ENCSR005WPU) |
| GSE83164 |
DNase-seq from kidney (ENCSR066DPD) |
| GSE83165 |
DNase-seq from lung (ENCSR094XAY) |
| GSE83167 |
DNase-seq from hindbrain (ENCSR179PIH) |
| GSE83171 |
DNase-seq from neural tube (ENCSR312QVY) |
| GSE83173 |
DNase-seq from hindbrain (ENCSR358ESL) |
| GSE83180 |
DNase-seq from embryo (ENCSR723IXU) |
| GSE83255 |
A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition [Hist] |
| GSE83290 |
A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition [CaptureC] |
| GSE83293 |
A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition |
| GSE83295 |
AP-1 transcription factors and the BAF complex mediate signal-dependent enhancer selection |
| GSE83394 |
Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells |
| GSE83422 |
Methyl-seq and ChIP-seq analyses of TSPAN8-high and TSPAN8-low subpopulations of ID4-EGFP+ undifferentiated spermatogonia |
| GSE83471 |
Hierarchical RNA processing is rate limiting for mitochondrial ribosome assembly |
| GSE83580 |
RNA-sequencing of Fes KO and WT melanomas |
| GSE83684 |
Ribosome Profiling analysis of Follicular B (FoB) cells purified from WT, miR-17~92 transgenic and miR-17-92 tKO mice |
| GSE83734 |
Absolute quantification of B cell transcriptome using ERCC spiked-in RNA |
| GSE83833 |
Genome-wide characterization of histone mark co-occurrence at single molecule resolution |
| GSE83926 |
Histone Deacetylase 3 Prepares Brown Adipose Tissue For Acute Thermogenic Challenge [ChIP-Seq, GRO-Seq] |
| GSE83928 |
Histone Deacetylase 3 Prepares Brown Adipose Tissue For Acute Thermogenic Challenge |
| GSE83960 |
ASXL1 Interacts with the Cohesin Complex to Maintain Chromatid Separation and Gene Expression for Normal Hematopoiesis [ChIP-Seq] |
| GSE83962 |
ASXL1 Interacts with the Cohesin Complex to Maintain Chromatid Separation and Gene Expression for Normal Hematopoiesis |
| GSE83992 |
An improved method for identifying biological circular RNAs |
| GSE84052 |
RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2 |
| GSE84064 |
Lmx1b ChIP-seq dataset in embryonic day 12.5 (e12.5) wild type mouse limb buds |
| GSE84125 |
Gene expression profiles in naïve and activated CD4+ T cells from WT and Capicua (Cic)-deficient mice |
| GSE84137 |
Vitamin C and L-Proline antagonistic effects capture alternative states in the pluripotency continuum [RNA-Seq] |
| GSE84164 |
Derivation of ground-state female ESCs maintaining gamete-derived DNA methylation |
| GSE84165 |
Derivation of ground-state female ESCs maintaining gamete-derived DNA methylation |
| GSE84256 |
Fat cells regenerate from myofibroblasts during wound healing |
| GSE84371 |
Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons |
| GSE84373 |
Vitamin C and L-Proline antagonistic effects capture alternative states in the pluripotency continuum |
| GSE84458 |
TET-dependent regulation of retrotransposable elements in mouse embryonic stem cells [RNA-seq] |
| GSE84459 |
TET-dependent regulation of retrotransposable elements in mouse embryonic stem cells [small RNA-seq] |
| GSE84460 |
TET-dependent regulation of retrotransposable elements in mouse embryonic stem cells |
| GSE84468 |
Tumor-derived prostaglandin E2 promotes p50 NF-κB-dependent differentiation of monocytic MDSC. |
| GSE84498 |
Single-cell spatial reconstruction reveals global division of labor in the mammalian liver |
| GSE84534 |
A multi-functional AAV-CRISPR-Cas9 and its host response |
| GSE84540 |
New transgenic mouse lines for selectively targeting astrocytes and for studying calcium signals in astrocyte processes in situ and in vivo |
| GSE84646 |
Allele-specific ATAC-seq across 16 neural progenitor cell clones |
| GSE84793 |
Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding [ChIP-seq] |
| GSE84795 |
Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding |
| GSE84802 |
Temporal-spatial Establishment of Initial Niche for the Primary Spermatogonial Stem Cell formation is Determined by an ARID4B Regulatory Network (ChIP-Seq) |
| GSE84808 |
Temporal-spatial Establishment of Initial Niche for the Primary Spermatogonial Stem Cell formation is Determined by an ARID4B Regulatory Network |
| GSE84820 |
Metabolic exhaustion of T cells in chronic infection is mediated by inhibitory receptor PD-1 and T cell receptor dependent transcription factor IRF4 |
| GSE84858 |
The Molecular Mechanism for EZH2 Function in DSS-induced Colitis |
| GSE84899 |
Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche. |
| GSE85039 |
A multi-scale model for hair follicle reveals heterogeneous skin domains drive rapid spatiotemporal hair growth patterning |
| GSE85062 |
Enforcement of developmental lineage specificity by transcription factor Oct1 (ChIP-Seq) |
| GSE85063 |
Enforcement of developmental lineage specificity by transcription factor Oct1 |
| GSE85071 |
The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan (ATAC-Seq) |
| GSE85072 |
The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan (ChIP-Seq) |
| GSE85073 |
The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan |
| GSE85100 |
PARP-1 Controls the Adipogenic Transcriptional Program by PARylating C/EBPβ and Modulating Its Transcriptional Activity |
| GSE85152 |
The spectrum and regulatory landscapes of intestinal innate lymphoid cells are shaped by the microbiome (single cells) |
| GSE85153 |
The spectrum and regulatory landscapes of intestinal innate lymphoid cells are shaped by the microbiome (ATAC-Seq) |
| GSE85154 |
The spectrum and regulatory landscapes of intestinal innate lymphoid cells are shaped by the microbiome (RNA-Seq) |
| GSE85156 |
The spectrum and regulatory landscapes of intestinal innate lymphoid cells are shaped by the microbiome (ChIP-Seq) |
| GSE85157 |
The spectrum and regulatory landscapes of intestinal innate lymphoid cells are shaped by the microbiome |
| GSE85164 |
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome |
| GSE85185 |
YY1 and CTCF Orchestrate a 3D Chromatin Looping Switch during Early Neural Lineage Commitment |
| GSE85209 |
Silencing SMOC2 protects from kidney fibrosis by inhibiting Fibroblast to Myofibroblast Transformation |
| GSE85221 |
Developmental Exposure to 2,2’,4, 4’ –Tetrabromodiphenyl Ether Induces Long-Lasting Changes in Liver Metabolism in Male Mice |
| GSE85251 |
Postnatal DNA demethylation and its role in tissue maturation |
| GSE85303 |
RNAseq changes in fibroblasts after treatment with selected protein(s) or E16.5 skin extract |
| GSE85337 |
Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells |
| GSE85440 |
Inhibition of Tumor Growth and Metastasis by EMMPRIN Multiple Antigenic Peptide (MAP) Vaccination Is Mediated by Immune Modulation |
| GSE85462 |
Escape from X-Inactivation Tumor Suppressor (EXITS) genes contribute to sex bias |
| GSE85505 |
KAT–independent gene regulation by Tip60 promotes ESC self-renewal but not pluripotency |
| GSE85520 |
IRF8 transcription factor controls survival and function of terminally differentiated conventional and plasmacytoid dendritic cells respectively |
| GSE85597 |
Extracellular Matrix Proteolysis by MT1-MMP is Associated with Influenza-Related Mortality |
| GSE85690 |
Distinct cell cycle control in naïve and primed mouse pluripotency |
| GSE85712 |
Physiologic expression of Sf3b1K700E causes impaired erythropoieses, aberrant splicing, and sensitivity to pharmacologic spliceosome modulation |
| GSE85721 |
Single nuclei RNA-seq from adult mouse Hippocampus |
| GSE85755 |
Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations |
| GSE85875 |
Single cell transcriptome sequencing of mammary stem cells in the pubertal mammary gland |
| GSE86019 |
Dicer maintains the identity and function of proprioceptive sensory neurons |
| GSE86028 |
A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 1) |
| GSE86030 |
A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 3) |
| GSE86031 |
A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 4) |
| GSE86039 |
A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 2) |
| GSE86042 |
A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells |
| GSE86167 |
Inhibition of inflammatory gene transcription by IL-10 is associated with rapid suppression of LPS-induced enhancer activation [RNA-Seq] |
| GSE86168 |
Inhibition of inflammatory gene transcription by IL-10 is associated with rapid suppression of LPS-induced enhancer activation [h3k27 ChIP] |
| GSE86169 |
Inhibition of inflammatory gene transcription by IL-10 is associated with rapid suppression of LPS-induced enhancer activation [stat3_ChIP] |
| GSE86170 |
Inhibition of inflammatory gene transcription by IL-10 is associated with rapid suppression of LPS-induced enhancer activation |
| GSE86393 |
Direct and tissue-specific assessment of the damaging potential of regulatory SNPs |
| GSE86400 |
Transcriptome of mouse preimplantation development [C57BL/6 x Cast; WT] |
| GSE86467 |
Pervasive translational regulation of the cell Q1 signalling circuitry underlies mammalian development |
| GSE86780 |
Innate and adaptive lymphocytes sequentially shape the gut microbiota and lipid metabolism |
| GSE86797 |
Epigenetic inflexibility of exhausted T cells limits durability of reinvigoration by PD-1 blockade |
| GSE86856 |
Genome-wide occupancy of LSD1 in differentiating C2C12 myoblasts. |
| GSE86865 |
RNA-seq transcriptonal profiling in E13.5 fetal liver erythroid cells from Tfam WT and KO mice |
| GSE86881 |
Transcriptional profiles of virus-specific CD8+ T cells from control or anti-PD-L1-treated LCMV-Clone 13 infected mice one day or 18-29 weeks after treatment |
| GSE86907 |
A novel requirement for Drosha in maintenance of mammalian CG methylation |
| GSE86909 |
NFIA regulates pancreatic cell fate and adult physiology through vesicle trafficking |
| GSE86912 |
Quantitative Proteomic and Transcriptomic Analysis Reveals Post-Transcriptional Regulation of Mitochondrial Biogenesis during Erythropoiesis |
| GSE86922 |
Activity of uncleaved caspase-8 controls anti-bacterial immune defense and TLR-induced cytokine production independent of cell death |
| GSE86955 |
Newborn and young adult (2 months) mouse dorsal skin cell culture time-series RNA-Seq |
| GSE86996 |
Histone modifications in primary intestinal epithelial cells from wild type (F/FUN) and intesinal NCoR1 deletion (ΔIECUN) neonates. |
| GSE87097 |
High concordance between Illumina HiSeq2500 and NextSeq500 for Reduced Representation Bisulfite Sequencing (RRBS) |
| GSE87104 |
RNA-seq Analysis of Wild Type and Ptpn11-deficient cerebellar Transcriptomes |
| GSE87212 |
Targeting Phospholipase D4 attenuates kidney fibrosis by modulating immune system and activating proteases |
| GSE87341 |
In Vitro Derivation and Propagation of Spermatogonial Stem Cell Activity from Mouse Pluripotent Stem Cells |
| GSE87366 |
Decreased Fgf8 gene dosage on gene expression |
| GSE87578 |
Coordinated Activities of Multiple Myc-Dependent and Myc-Independent Biosynthetic Pathways in Hepatoblastoma |
| GSE87608 |
Next-Generation Sequencing Supports Quantitative Analysis of Wild Type and Runx2+/- Calvarial Transcriptomes With or Without Administration of MS-275 |
| GSE87623 |
Vitamin C induced epigenomic remodeling in IDH1 mutant acute myeloid leukemia |
| GSE87633 |
Organism-level analysis of vaccination reveals networks of protection across tissues |
| GSE87670 |
Pathogen size alters C-type lectin receptor signaling in dendritic cells to influence CD4 T cell differentiation |
| GSE87681 |
Analysis of gene expression from CD45neg cells of lung tumors upon neutrophil depletion or not |
| GSE87795 |
Single-cell transcriptome analysis of mouse fetal livers from different developmental stages |
| GSE87819 |
The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells [ATAC-Seq] |
| GSE87820 |
The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells [ChIP-Seq] |
| GSE87821 |
The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells [RNA-Seq] |
| GSE87822 |
The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells |
| GSE87848 |
RNA-seq analysis of livers of C57BL/6 mice upon antagomiR-122 and CL316243 treatment |
| GSE88728 |
Small RNA sequencing of serum collected from mice before and after manifestation of tumor |
| GSE88730 |
Therapeutic effects of Tie2 activation in treatment of neovascular age-related macular degeneration over conventional VEGF blockade. |
| GSE88745 |
A hyperdynamic H3.3 nucleosome marks promoter regions in pluripotent embryonic stem cells |
| GSE88760 |
DNA-binding pluripotency factors and DNA demethylases can cooperate to maintain pluripotent stem cell identity even in the absence of Brd4 [RNA-seq] |
| GSE88817 |
In situ CAPTURE of chromatin interactions by biotinylated dCas9 |
| GSE88830 |
CD8 T cell phenotype following antigen education by lymphatic endothelial cells versus mature dendritic cells |
| GSE88913 |
Small RNA sequencing of serum-derived RNA for the evaluation of 5' tRNA halves depletion protocols |
| GSE88914 |
Evaluation of three small RNA library preparation kits on serum-derived RNA |
| GSE88915 |
Depletion of tRNA-halves enables effective small RNA sequencing of low-input murine serum samples |
| GSE88953 |
Impact of hypothermic preservation of mouse kidney resident immune cells |
| GSE88961 |
Mechanism of Induction of Mouse Breast Cancer by Non-coding Heterochromatic RNAs |
| GSE88982 |
RNA-seq of mouse myeloid progenitors reveals two independent pathways for monocyte production via GMPs and MDPs |
| GSE88986 |
cFos-Sox9 Axis Reprograms Bone Marrow-derived Mesenchymal Stem Cells into Chondroblastic Osteosarcoma [ChIP-seq] |
| GSE89011 |
Nat1 promotes translation of specific proteins that induce differentiation of mouse embryonic stem cells [ribosome profiling] |
| GSE89012 |
Nat1 promotes translation of specific proteins that induce differentiation of mouse embryonic stem cells |
| GSE89014 |
cFos-Sox9 Axis Reprograms Bone Marrow-derived Mesenchymal Stem Cells into Chondroblastic Osteosarcoma [RNA-seq] |
| GSE89015 |
cFos-Sox9 Axis Reprograms Bone Marrow-derived Mesenchymal Stem Cells into Chondroblastic Osteosarcoma |
| GSE89032 |
Post-transcriptional Gene Silencing Mediated by microRNAs is Controlled by Nucleoplasmic Sfpq [RNA-Seq] |
| GSE89033 |
Post-transcriptional Gene Silencing Mediated by microRNAs is Controlled by Nucleoplasmic Sfpq |
| GSE89061 |
In utero exposure to therapeutic doses of acetaminophen and ibuprofen accelerates germ cell differentiation in the mouse embryonic testis |
| GSE89069 |
Next Generation Sequencing Facilitates Quantitative Analysis of brain Transcriptome after viral infection with ZIKV (Zika Virus) |
| GSE89164 |
Cell fixation and preservation for droplet-based single cell transcriptomics |
| GSE89258 |
Effect of Aire deficiency on peripheral Tgd17 gene expression |
| GSE89261 |
Transcriptional response of small-intestinal lamina propria CD4+ T cells to bacterial colonization |
| GSE89264 |
Transcriptional profile of mouse nephron progenitor cells |
| GSE89272 |
Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions (RNA-Seq) |
| GSE89275 |
Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions |
| GSE89280 |
Integrative analysis of single-cell ATAC-seq and RNA-seq using Self-Organizing Maps [scRNA-Seq] |
| GSE89285 |
Integrative analysis of single-cell ATAC-seq and RNA-seq using Self-Organizing Maps |
| GSE89352 |
Phospholipase Cγ pathway-dependent mTOR signaling controls IL-7-mediated early B cell development |
| GSE89362 |
Integrative analysis of single-cell ATAC-seq and RNA-seq using Self-Organizing Maps [ATAC-seq] |
| GSE89378 |
Single-cell and bulk RNA-seq of sorted and micro-dissected mouse bone marrow and fetal liver cells |
| GSE89379 |
Transcriptomics of single-cell and bulk sorted and micro-dissected mouse bone marrow, fetal liver and small intestine crypt cells |
| GSE89416 |
ATAC-seq analysis in 5F cells and AGM cells with EZH1 depletion |
| GSE89418 |
EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development |
| GSE89450 |
Identification of quiescent and spatially-restricted mammary stem cells that are hormone responsive |
| GSE89477 |
Single-cell profiling of tumor infiltrating T cells |
| GSE89495 |
Efficient Mammary Gland Involution Requires c-Jun N-terminal kinase |
| GSE89520 |
Lamins organize the three dimensional genome from nuclear periphery in ES cells |
| GSE89598 |
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [XL9 DHX9 FLASH CLIP-seq] |
| GSE89619 |
Genome-wide analysis of transcription in in vitro- and in vivo-derived motor neurons |
| GSE89646 |
Impact of the gut microbiota on enhancer accessibility in gut intraepithelial lymphocytes |
| GSE89742 |
Hippo Pathway Regulates Microarchitecture of Fibroblastic Reticular Cells in Lymph Node |
| GSE89751 |
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [XL8 DHX9 FLASH CLIP-seq] |
| GSE89754 |
Population snapshots predict early haematopoietic and erythroid hierarchies |
| GSE89758 |
RNA-seq of Tumor-associated Endothelial Cells from Different Immunodeficient Backgrounds |
| GSE89821 |
Super-enhancer-mediated RNA processing revealed by integrative microRNA network analysis [ChrRNA-seq] |
| GSE89826 |
Super-enhancer-mediated RNA processing revealed by integrative microRNA network analysis |
| GSE89960 |
An environment-dependent transcriptional network regulates human microglia phenotypes |
| GSE90016 |
Mapping of transcription factor binding sites in mouse nephron progenitor cells |
| GSE90017 |
Transcriptional and cistromic profiling of mouse nephron progenitor cells |
| GSE90024 |
Transcriptome analysis to investigate the oncogenic TGF-β-Smad-Snail signaling pathway |
| GSE90034 |
Srf destabilizes cell identity |
| GSE90048 |
Chromatin immunoprecipitation and ATAC-Seq data from meduallar thymic epithelial cells [ATAC-Seq] |
| GSE90049 |
Chromatin immunoprecipitation and ATAC-Seq data from meduallar thymic epithelial cells [ChIP-Seq] |
| GSE90050 |
Chromatin immunoprecipitation and ATAC-Seq data from meduallar thymic epithelial cells |
| GSE90055 |
Allelic expression in tibial growth plates from 21 day old C57BL/6J x CAST/EiJ F1s |
| GSE90063 |
Perturb-seq: Dissecting molecular circuits with scalable single cell RNA profiling of pooled genetic screens |
| GSE90091 |
Characterization of mouse embryonic stem cells without any G1 cyclins |
| GSE90094 |
The Ets-family transcription factors PU.1 and SpiB are redundantly required by mature B cells to sense and respond to environmental cues |
| GSE90388 |
DNase-seq from MN1 (ENCSR732IZK) |
| GSE90459 |
RNA-seq analysis of mouse brain endothelial cells and glioma endothelial cells |
| GSE90486 |
Dissecting immune circuits by linking CRISPR pooled screens with single cell RNA-seq [SET1] |
| GSE90488 |
Dissecting immune circuits by linking CRISPR pooled screens with single cell RNA-seq |
| GSE90509 |
Neuronal activity, TGFβ signaling and unpredictable chronic stress affect transcription of Gadd45 family members in vitro and in vivo [MeDIP-Seq] |
| GSE90513 |
Neuronal activity, TGFβ signaling and unpredictable chronic stress affect transcription of Gadd45 family members in vitro and in vivo |
| GSE90533 |
An HDAC3-PROX1 Corepressor Module Acts on HNF4α to Control Hepatic Triglycerides |
| GSE90557 |
Genome-wide maps of chromatin state in neural stem/progenitor cells (NSC) from mouse neonatal forebrain [ChIA-PET] |
| GSE90561 |
Sox2 is required for functional chromatin connectivity in brain-derived neural stem cells. |
| GSE90641 |
Epigenome analyses implicate ILC2s as key mediators of allergic airway inflammation |
| GSE90652 |
The transcriptome comparison between wildtype Hb9-GFP and Satb1-/-Hb9-GFP retinal ganglion cells (RGCs). |
| GSE90655 |
Clonal conversion of B-lymphoid leukemia reveals cross-lineage transfer of malignant states. |
| GSE90673 |
Expression profiles of retinal neuronal cells |
| GSE90697 |
Organism-level analysis of vaccination reveals networks of protection across tissues |
| GSE90704 |
DNA methylation in the gene body influences MeCP2-mediated gene repression |
| GSE90712 |
RNA sequencing of CDH1+/THY1+ and CDH1-/THY1+ germline stem cells |
| GSE90742 |
Clonal analysis of lineage fate in unperturbed hematopoiesis |
| GSE90758 |
RNA-SEQ of mutants B cell for IgH 3'RR and Emu |
| GSE90759 |
SmallRNA-SEQ of mutants B cell for IgH 3'RR and Emu |
| GSE90760 |
Analysis of the effect of two IgH superenhancer deletion on IgH locus transcription |
| GSE90795 |
Transcriptomic analysis of intestinal epithelial Sox4 knockout |
| GSE90806 |
A Molecular Census of Arcuate Hypothalamus and Median Eminence Cell Types |
| GSE90825 |
Blimp1 induces transient metastatic heterogeneity in pancreatic cancer |
| GSE90848 |
Epithelial-Mesenchymal Micro-Niches Govern Stem Cell Lineage Choices (SC RNA-Seq) |
| GSE90850 |
Epithelial-Mesenchymal Micro-Niches Govern Stem Cell Lineage Choices |
| GSE90853 |
Acetyl CoA metabolism by ACSS2 regulates neuronal histone acetylation and hippocampal memory [in vivo ChIP-seq] |
| GSE90854 |
Acetyl CoA metabolism by ACSS2 regulates neuronal histone acetylation and hippocampal memory [RNA-seq In Vitro] |
| GSE90855 |
Acetyl CoA metabolism by ACSS2 regulates neuronal histone acetylation and hippocampal memory [RNA-seq In Vivo] |
| GSE90905 |
High-fat diet fuels prostate cancer progression by rewiring the metabolome and amplifying the MYC program |
| GSE90910 |
High-fat diet fuels prostate cancer progression by rewiring the metabolome and amplifying the MYC program |
| GSE90912 |
High-fat diet fuels prostate cancer progression by rewiring the metabolome and amplifying the MYC program |
| GSE90918 |
Blimp1 induces transient metastatic heterogeneity in pancreatic cancer [688M_ATAC-seq] |
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