GEO Accession viewer

GSE56356	Effect of TTF-1/NKX2-1 expression on TGF-beta induced gene expression in A549 lung cancer cell line.
GSE57821	Transcriptional dysregulation of synaptic genes in a human iPSC model of major mental disorders
GSE58464	Rapid isolation of extracellular vesicles from cell culture and biological fluids using a synthetic peptide with specific affinity for heat shock proteins
GSE59695	Role of histone lysine demethylase LSD2 in hepatic metabolism
GSE59830	ChIP-seq analysis of LSD2/H3K4me1 interaction in control and LSD2-knockdowned HepG2 cells
GSE60514	KLF1 null neonates display hydrops fetalis and a deranged erythroid transcriptome
GSE60559	RNA-sequencing in HEK293T cells under the knockdown of Arkadia or ESRP2
GSE61515	AXL mediates resistance to PI3Kα inhibition by activating the EGFR/PKC/mTOR axis in head and neck and esophageal squamous cell carcinomas.
GSE61910	Reduced expression of RBM47 enhances Nrf2 activity to promote tumor growth in A549 lung adenocarcinoma cells
GSE61968	Semiconductor-based sequencing of genome-wide DNA methylation states
GSE63799	High-throughput small RNA sequencing of human primary macrophages stimulated with staurosporine
GSE63802	Small RNA-sequencing in apoptotic macrophages
GSE64588	Molecular phenotyping of a test compound (small-molecule neurotransmitter receptor antagonist) in primary human hepatocytes
GSE65193	The activation of the NF-κB-JNK pathway is independent of the PI3K-Rac1-JNK pathway involved in the bFGF-regulated human fibroblast cell migration
GSE65655	The effect of HOXB13 CRISPR knockout on the transcriptome in G401 cells
GSE65952	Transcriptome analysis of Advanced glycation end products treated ligament cells
GSE66135	Allele-selective Transcriptome Recruitment to Polysomes Primed for Translation: Protein-coding and Noncoding RNAs, and RNA Isoforms
GSE66238	MicroRNA and gene expression changes in human cerebral aneurysms [RNA-seq]
GSE66240	MicroRNA and gene expression changes in human cerebral aneurysms
GSE66741	RNA-sequencing in OS-RC-2 cells under the knockdown of Arkadia or ESRP2
GSE66993	GAS5 controls Nodal autocrine in Human Embryonic Stem Cells Self-Renewal through competing endogenous mechanism
GSE67898	Reversal of persistent wound-induced retinal pigmented epithelial-to-mesenchymal transition by the TGFb pathway inhibitor, A-83-01.
GSE67899	Delay and restoration of persistent wound-induced retinal pigmented epithelial-to-mesenchymal transition by TGF-beta pathway inhibitors: Implications for age-related macular degeneration
GSE68297	PolyA RNAseq from HCT116 cells in normoxia and hypoxia
GSE68482	High salt primes a specific activation state of macrophages, M(Na)
GSE68671	Differential regulation of alternatively polyadenylated isoforms
GSE68987	RNA sequencing analysis of miR-603 overexpression
GSE69036	A positive regulatory loop between a Wnt-regulated non-coding RNA and ASCL2 controls intestinal stem cell fate
GSE69787	Transcriptome and Micronome analysis of OPLL
GSE69827	Differential expression profiles of type I JAK inhibitor persistent vs. naïve MPN cells
GSE69909	MicroRNA sequencing of umbilical cord mesenchymal stem cells (uMSCs) and HEK293T cells derived exosomes
GSE69982	Primary cilium-autophagy-Nrf2 (PAN) axis links the cell cycle to neuroectoderm fate in human embryonic stem cells
GSE71359	RNA sequencing of T-ALL (COG study)
GSE73555	Genes regulated by TAZ in a lung fibroblast cell line
GSE73632	Comparative analysis of Rtf1- and PAF1C-regulated genes
GSE74351	P300 ChIP-Seq analysis of PC3 cells treated with MnTE-2-PyP or not 24 hours prior to irradiation of 20 Gy.
GSE74734	An Integrated Metabolic Atlas of Clear Cell Renal Cell Carcinoma
GSE74760	Comprehensive Evaluation of AmpliSeq Transcriptome, a Novel Targeted Whole Transcriptome RNA Sequencing Methodology for Global Gene Expression Analysis.
GSE74935	Inhibition of uPA expression by CRISPR-dCas9 DNA methyltransferases
GSE75082	Transcriptome analysis of control and miR-200a overexpressed TF-1 cells
GSE75428	Downregulation of neuropilin-1 on macrophages modulates antibody-mediated tumoricidal activity
GSE75844	Transposon mutagenesis reveals fludarabine-resistance mechanisms in chronic lymphocytic leukemia
GSE76139	Next-gen sequencing for transcriptomic differences in HuH-7 human hepatocellular carcinoma cell line models of hepatotoxicity
GSE76393	Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity
GSE76883	Vitamin D/Vitamin D Receptor (VDR) Axis Regulates LMNA gene expression [RNA-Seq]
GSE76884	Vitamin D/Vitamin D Receptor (VDR) Axis Regulates LMNA gene expression [ChIP-Seq]
GSE76887	Vitamin D/Vitamin D Receptor (VDR) Axis Regulates LMNA gene expression
GSE77741	Analyses of T-ALL (COG study)
GSE78740	Restoration of mesenchymal RPE by transcription factor-mediated reprogramming
GSE79051	RNA sequencing analysis of NGFR ablation in both p53-positive and negative non-small-cell lung cancer cell lines
GSE79123	HEK293 cells 100 cell RNAseq profiling on Ion Proton
GSE79130	Transcriptome profiling of single HEK293 cells with UMIs sequenced on Ion Torrent Proton (Run 20151215)
GSE79136	A cost effective single cell RNA sequencing approach for the Fluidigm C1
GSE79917	Transcriptionally inactive ATF2 variant drives melanomagenesis [Seq]
GSE80033	Somatic PRDM2 c.4459delA mutations in colorectal cancers control histone methylation and tumor growth
GSE80135	Prox1 (Prosper-related homeobox 1) transcription factor depletion effect on CGTH-W-1 cells.
GSE80722	Transcriptome analysis of patient-derived xenograft models of HER2+ breast cancer brain metastases
GSE80746	Gene regulation of candidate cancer gene DIP2C
GSE81014	Transcriptionally inactive ATF2 variant drives melanomagenesis
GSE81216	SpermBase - A database for sperm-borne RNA contents
GSE81585	Transcriptome signatures of human induced pluripotent stem cell-derived cardiomyocytes classify cardiomyocyte subtype populations
GSE81955	Analysis of polysomal enrichment and depletion of mRNA in untreated and TGF-beta treated MCF-10A and MCF7 cells
GSE83321	Next Generation Sequencing Analysis of control and DEHP exposure HepG2 cell Transcriptomes
GSE83577	Genome-wide Transcriptome Analysis of CD36 Overexpression in HepG2.2.15 Cells to Explore Its Regulation Role of Metabolism and HBV Life Cycle
GSE83611	Field cancerized fibroblasts in primary culture, P2
GSE83668	Transcriptomic analysis of inter- and intra-patient variation in human iPSC cardiomyocytes: Platform for precision medicine to predict drug toxicity
GSE83930	Using AmpliSeq we have performed quantitative analysis of 20,803 genes in Negative control precursor-miR (NC-Pre-miR) and pre-miR-17 transfected Rheumatoid arthritis Synovial Fibroblasts (RASFs)
GSE83939	mRNA-seq analysis of HCT116 cells following gene overexpression of IDO1 with or without Indole treatment
GSE84339	Whole transcriptome analysis of lung squamouse cell carcinoma
GSE84525	miRNA sequencing of MIBC
GSE84697	Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant mRNA signatures
GSE85343	Glucocorticoid receptor regulates the ANGPTL4 gene in a CTCF-mediated chromatin context in human hepatic cells
GSE86219	RNAseq from polysomal RNA harvested from HCT116, MCF7 and SJSA cell lines treated with DMSO and Nutlin
GSE86221	Total RNA-seq from HCT116, MCF7 and SJSA cell lines treated with DMSO and Nutlin
GSE86222	Identification of a core p53 transcriptional program with highly fractionated tumor suppressive activity
GSE86480	Molecular signature for anastasis, recovery from the brink of apoptotic cell death
GSE87508	Gene expression of human T cells stimulated in the presence of TGF-β
GSE87660	Low-cost, low-bias and low-input RNA-seq with High Experimental Verifiability based on Semiconductor Sequencing
GSE87664	Next generation sequencing facilitates transcriptome analyses of mock and RHCG transfected esophageal squamous cell carcinoma cell line KYSE30 cells
GSE87665	Next generation sequencing facilitates transcriptome analyses of mock and NCCRP1 transfected esophageal squamous cell carcinoma cell line KYSE150 cells
GSE89203	ZEB1 binding sites in TGF-beta-stimulated MDA-231-D and Hs578T basal type breast cancer cell lines [ChIP-seq]
GSE89205	RNA-sequencing in TGF-beta treated MDA-231-D cells transfected with ZEB1/ZEB2 siRNAs [RNA-seq]
GSE89206	ZEB1-regulated inflammatory phenotype in breast cancer cells
GSE89223	Novel RNA biomarkers of prostate cancer revealed by RNA-seq analysis of formalin-fixed samples obtained from Russian patients
GSE89225	Regulatory T cells exhibit distinct features in human breast cancer
GSE89234	Transcriptome profiling of single HEK293 cells with UMIs on Ion Torrent Proton (Run 20150702)
GSE89235	Transcriptome profiling of single HEK293 cells with UMIs on Ion Torrent Proton (Run 20160225)
GSE89236	UMI-based, single cell RNA sequencing of human nasal epithelial cells grown for 52 days at air liquid interface
GSE89237	UMI-based, single cell RNA sequencing of human nasal epithelial cells grown for 33 days at air liquid interface
GSE89393	Differences in RNA expression between primary and metastatic colon tumor
GSE89701	Whole-transcriptome maps of HepG2 cells after exposure to cationic liposomes and controls
GSE91023	Tethered Oligonucleotide-Primed sequencing (TOP-seq): a high resolution economical approach for DNA epigenome profiling
GSE95397	Genome-wide transcriptional targets of KLF15 in human airway smooth muscle
GSE95754	Gene expression profiles of human circulating CD4+CD25-PD-1hi T cells in comparison with Tregs and Tconv
GSE96914	Autocrine BMP-4 signaling promotes survival of colorectal cancer cells.
GSE96987	AmpliSeq analysis of human iPSC-derived cardiomyocytes
GSE96989	RNA sequencing analysis of cardiomyocytes
GSE97273	Precise integration of inducible transcriptional elements (PrIITE) enables absolute control of inducible gene expression.
GSE97644	Circulating Exosomal miRNA as a Biomarker for Age-Related Cognitive Decline and Decreased Hippocampal Volume
GSE97709	Plasma transcriptome profiling in patients with chronic kidney disease and end-stage renal disease
GSE97986	Gene expression changes in Hutchinson Gilford Progeria Syndrome (HGPS) are counteracted by calcitriol
GSE98270	ZEB1 binding sites in TGF-beta-stimulated MCF7 breast cancer cell line
GSE98273	RNA-sequencing in MDA-231-D cells transfected with ZEB1 or ZEB2 siRNAs
GSE98602	Human umbilical cordderived mesenchymal stem cells (UCMSCs) induce a global transcriptional reprogramming in cisplatindamaged human renal proximal tubular epithelial cells (RPTECs).
GSE99060	Transcriptomic analysis in breast cancer cell lines after CDK4/6 inhibition
GSE99062	Transcriptomic analysis in PDX mammary carcinoma after CDK4/6 inhibition
GSE99063	CDK4/6 inhibition and tumor immunity
GSE99149	RNA-sequencing in A549 cells transfected with TUFT1 siRNA
GSE99594	Nuclear fractionation to identify chromatin associated RNA in interphase and M-phase cells [RNA-seq]
GSE99770	RNA sequencing to determine the contribution of kinase receptor transactivation to G protein coupled receptor signalling in vascular smooth muscle cells
GSE99958	Next-generation sequencing of PDLSC transcriptome
GSE100243	Transcriptome of locally advanced colorectal tumours
GSE100624	Transcriptomic profiling of CD8+ T cells from steroid-sensitive and steroid-resistant asthmatics and healthy controls
GSE100625	Growth differentiation factor 15 (GDF15) promotes human rhinovirus infection and inflammation
GSE100931	SCD – Stem Cell Differentiation on board the International Space Station [RNA-seq]
GSE100933	SCD – Stem Cell Differentiation on board the International Space Station: the problem of human bone loss
GSE101514	Dysregulation of PDGFRB contributes to the pathogenesis of LMNA-related dilated cardiomyopathy
GSE101526	PolyA RNA-seq from HCT116 (WT and CDK8as/as) cells in normoxia or hypoxia and treated with DMSO or 3MB-PP1
GSE101773	PREP1 down-regulation changes the DNA replication timing of Lamin-associated DNA and induces DNA damage [ChIP-Seq]
GSE101774	PREP1 down-regulation changes the DNA replication timing of Lamin-associated DNA and induces DNA damage [RNA-Seq]
GSE101775	PREP1 down-regulation changes the DNA replication timing of Lamin-associated DNA and induces DNA damage [Repli-Seq]
GSE101776	PREP1 down-regulation changes the DNA replication timing of Lamin-associated DNA and induces DNA damage
GSE101989	Deletion of 11q in neuroblastomas drives sensitivity to PARP inhibition [SEQ]
GSE101990	Deletion of 11q in neuroblastomas drives sensitivity to PARP inhibition
GSE102357	hnRNPC regulates cancer-specific alternative cleavage and polyadenylation profiles
GSE102492	RNA sequencing of macrophages derived from monocytes differentiated in presence of M-CSF, GM-CSF and heat killed mycobacteria M. obuense
GSE102511	Transcriptome sequencing of 15 normal lung parenchyma (NL), 17 atypical adenomatous hyperplasia (AAH) and 16 lung adenocarcinoma (LUAD) samples from 17 patients
GSE103016	SBF2-AS1 promotes tumorigenesis as a miRNA sponge in lung cancer
GSE103299	Transcriptome sequencing indentifies novel BMP5 downstrem genes and network in HT-29 cells
GSE103487	CPD-seq map of UV damage formation in human fibroblasts
GSE103488	Transcriptomic analysis of normal and IPF lung fibroblast SSEA4+ and SSEA4- cells
GSE103532	Combined Calorie and Protein Restriction in Healthy Kidney Donors Improves Kidney Outcome in Donors and Kidney Transplant Recipients
GSE104091	The striatal kinase DCLK3 produces neuroprotection against mutant huntingtin
GSE104226	Translated Long Non-Coding Ribonucleic Acid ZFAS1 Promotes Cancer Cell Migration by Elevating Reactive Oxygen Species Production in Hepatocellular Carcinoma
GSE104297	miRNA seq of feto-placental arterial endothelial cells (pfEC) after normal pregnancy vs pregnancy complicated by gestational diabetes (GDM)
GSE104854	Ribosome-free RNA sequencing of long noncoding RNAs and circular RNAs in lung adenocarcinoma
GSE104947	Substoichiometric ribose methylations in spliceosomal snRNAs
GSE105414	Genome-wide search for differentially expressed RNAs responsible for the effects induced by Ebola virus replication and transcription
GSE106719	Decreased TGFBR3/Betaglycan expression enhances the metastatic abilities of renal cell carcinoma cells through TGF-b-dependent and independent mechanisms
GSE106935	5hmC-seq in human kidney DNA
GSE107466	Dynamic microRNA regulatory networks in establishing the Cellular specificity of developing human brains (miRNA-seq)
GSE107467	Dynamic microRNA regulatory networks in establishing the Cellular specificity of developing human brains (mRNA-seq)
GSE107468	Dynamic microRNA regulatory networks in establishing the Cellular specificity of developing human brains
GSE107785	Essential Roles of SETD7 as Transcriptional Activator and Co-regulator of H3K36me in Cardiac Lineage Commitment
GSE107960	Pancreatic tumor microenvironment confers highly malignant properties on pancreatic cancer cells
GSE107975	Investigation of the gamma-tubulin binding site in the nuclear and mitochondrial DNA of cells in S-phase
GSE108050	Expression data in LoVo cells treated with MEK inhibitor
GSE108159	Exosome-mediated transfer of lncRUNX2-AS1 from multiple myeloma cells to MSCs contributes to osteogenesis
GSE108556	Genome-wide stability of DNA replication program in single mammalian cells
GSE108676	Rhesus iPSC-CMs response to anoxia, comparing with human iPSC-CMs
GSE109139	DNA IP for 5hmC modified CpGs in DNA of ESC derived hepatocyte like cells exposed to high energy substrates.
GSE109296	Effect of NORAD shRNA on A549 cells treated with TGF-beta
GSE109686	Cell transplantation strategies for acquired and inherited disorders of peripheral myelin
GSE110180	Transcriptomic analysis of multiple myeloma cell lines
GSE110205	Whole transcriptome targeted gene quantification provides new insights on pulmonary sarcomatoid carcinomas
GSE110727	Characterization of the nuclear and cytosolic transcriptomes in human brain tissue
GSE111082	Hominin-specific NOTCH2NL genes affect Notch signaling and cortical neurogenesis
GSE111352	S1PR3–G12-biased agonist ALESIA targets cancer metabolism and promotes glucose starvation [MCF-7 RNA-seq]
GSE111466	Healing human gingiva miRNome
GSE111523	Healing human gingiva transcriptome
GSE111524	Healing human gingiva
GSE111754	miRNA-Seq identifies a serum miRNA panel which can detect and monitor liver disease in pediatric cystic fibrosis
GSE112289	Extracellular RNA profiles with human age
GSE112592	Next Generation Sequencing Facilitates Quantitative Analysis of Ramos and Rituximab-resistant Ramos cell Transcriptomes
GSE112706	Targeted RNA-Seq of Human Naïve CD4+ cells
GSE112707	Targeted RNA-Seq of Human LPS-stimulated Monocytes
GSE112941	Molecular variability of patient-derived colon tumor xenografts
GSE112989	Next Generation Sequencing Facilitates Quantitative Analysis of Original and RCHO-resistant OCI-LY8 cell Transcriptomes
GSE113001	Next Generation Sequencing Facilitates Quantitative Analysis of Original and RCHO-resistant NU-DUL-1 cell Transcriptomes
GSE113010	Defining the transcriptome of T cells transduced with FOXP3fl or FOXP3d2
GSE113094	Investigation of the PCNA binding site in the DNA of cells in S-phase
GSE113156	Transcriptome change after tocilizumab therapy in rheumatoid arthritis patients
GSE113199	HO1 activates autophagy to protect intervertebral disc degeneration
GSE113632	MicroRNA profiling and analysis of primary OPLL cell derived exosomes
GSE113633	MicroRNA profiling of normal and imflammation induced nuclues pulposus and annulus fibrosis primary cells
GSE113634	Transcriptome profiling of osteoblasts treated with uMSC-derived exosomes
GSE114040	The combination of cantharidin and anti-angiogenic therapeutics presents synergistic antitumor effects against pancreatic cancer
GSE114286	Comprehensive transcriptome anaylsis of psoriasis in a Han Chinese population
GSE114371	AmpliSeq Transcriptome Analysis of Human Alveolar and Monocyte-Derived Macrophages Over Time in Response to Mycobacterium tuberculosis infection
GSE115360	SIRT7-dependent deacetylation of fibrillarin controls H2A methylation and rRNA synthesis during the cell cycle
GSE115867	The ESCRT-III protein CHMP1A mediates secretion of sonic hedgehog on a novel class of extracellular vesicles
GSE117275	Micronome profiling in 3 pairs of salivary adenoid cystic carcinoma(SACC) and the corresponding nomal salivary gland tissues
GSE117495	SMAD2 binding regions in estrogen receptor-positive breast cancer cell line, T47D
GSE117496	SMAD2 binding regions in triple negative breast cancer cell line, Hs578T
GSE117497	RNA-seq transcriptome analyses in T47D cells treated with ActA and Palbociclib.
GSE117502	SMAD2 binding regions in breast cancer cell line and RNA-seq transcriptome analyses in T47D
GSE117822	Transcriptome Analysis of Huh7 cells Infected with Adenovirus Overexpression GSTZ1 or PCK1
GSE118104	AmpliSeq Transcriptome Analysis of Human Prostate Cancer Cells With or Without Overt SRRM4 Expression
GSE118829	Gene expressions of T cells in each developmental stages in healthy volunteers and patients with rheumatoid arthritis
GSE119021	A novel long non-coding RNA HOXC-AS3 mediates tumorigenesis of gastric cancer by binding to YBX1
GSE119841	Identification of thiostrepton as a pharmacological approach to rescue misfolded alpha-sarcoglycan mutant proteins from degradation
GSE119909	Identification of human gene expression induced by 4MU-xyloside treatment
GSE119938	Profiling circular RNAs in HeLa cell
GSE120028	Transcriptomic analysis of advanced solid tumors in first-in-human phase 1 study of IT1208, a defucosylated humanized anti-CD4 depleting antibody [3'SAGE-seq]
GSE120101	T-cell receptor repertoire analysis of advanced solid tumors in first-in-human phase 1 study of IT1208, a defucosylated humanized anti-CD4 depleting antibody [TCR-seq]
GSE120102	TCR repertoire and transcriptomic analyses of advanced solid tumors in first-in-human phase 1 study of IT1208, a defucosylated humanized anti-CD4 depleting antibody
GSE120495	Defining Housekeeping Genes Suitable for RNA-seq Analysis of the Human Allograft Kidney Biopsy Tissue
GSE120734	mRNA-seq for etoposide-treated TLP-knockdown cells
GSE121842	Next Generation Sequencing Analysis of Colorectal Cancer Tissue Transcriptomes
GSE122246	RNA sequencing reveals PNN as a predictive biomarker of clinical outcome in stage III colorectal cancer patients treated with adjuvant chemotherapy
GSE122534	Knockdown IGF-1R triggers viral RNA sensors MDA5- and RIG-1-mediated the mitochondrial apoptosis in colonic cancer cells
GSE122619	Global transcriptomic investigation of the human macrophage response towards pathogenic/non-pathogenic mycobacteria
GSE122630	On-Treatment Biomarkers Improve Prediction of Response to Neoadjuvant Chemotherapy in Breast Cancer
GSE122661	A platform for generation of chamber specific cardiac tissues and disease modelling
GSE122844	Genes regulated in HT-1080 cells after 4 hours of treatment with IRAK4 inhibitor
GSE122845	Genes regulated in HT-1080 cells after 24 hours of treatment with IRAK4 inhibitor
GSE122891	Pentoxifylline-induced differentially-expressed genes in hypertrophic scar fibroblasts
GSE122912	Genes regulated in HT-1080 cells after treatment with IRAK4 inhibitor
GSE123661	Transcriptomic analysis of Kupffer cells in patients with cirrhosis
GSE124407	BACH1 alters the expression of EMT-related genes to promote metastasis in pancreatic cancer [RNA-seq]
GSE124408	BACH1 alters the expression of EMT-related genes to promote metastasis in pancreatic cancer
GSE124495	NPM and NPM-MLF1 interact with chromatin remodeling complexes and influence their recruitment to specific genes
GSE124676	Exercise reverses dysregulation of T cell-related function in blood leukocytes of patients with PD
GSE124685	mRNA Sequencing to identify transcriptional changes in early and late stages of lung in human Idiopathic Pulmonary Fibrosis
GSE126253	A pathogenic CtBP1 missense mutation causes altered cofactor binding and transcriptional activity
GSE126798	Human liver organoids; a patient-derived primary model for HBV Infection, Replication and Related Hepatocellular Carcinoma
GSE127116	Gene regulation by TLR2 and TLR10 in oncogene-induced senescence
GSE127664	RNA-seq experiment performed on activated human CD4+ T cells
GSE128024	ChIP-seq analysis of myeloma cell lines
GSE128055	Gene expression profile during senescence induced by LSG1 knockdown
GSE128070	Synthetic lethality between VPS4A and VPS4B triggers an inflammatory response in colorectal cancer
GSE128550	Re-expression of TAZ in human myeloma cell line KMM1
GSE128802	mRNA map of HUVECs treated with HeLa exosome and Human Cervical Epithelial cell (Hcer)exosome [RNA-seq]
GSE128803	exosomal microRNA maps of HeLa cell exosome vs human cervical epithelial cell exosome [miRNA-seq]
GSE129026	Targeting codon 158 p53-mutant cancers via the induction of p53 acetylation [RNA-seq]
GSE129027	Targeting codon 158 p53-mutant cancers via the induction of p53 acetylation
GSE129312	TTF-1/NKX2-1 and ASCL1 binding regions in a small cell lung carcinoma cell line, NCI-H209
GSE129340	RNA-seq transcriptome analysis in NCI-H209 and NCI-H441 cells transfected with TTF-1/NKX2-1 or ASCL1 siRNAs.
GSE129341	Comparative Analysis of TTF-1 Binding DNA Regions in Small Cell Lung Cancer and Non-Small Cell Lung Cancer
GSE129358	PRRX2 and HEY2 double knock-down facilitates ASCL1-induced neuron conversion in human dermal fibroblasts II
GSE130385	Temporal transcriptional response from primary human chronic lymphocytic leukemia (CLL)-cells after B-cell receptor stimulation.
GSE130612	Multi-omics analysis of neuroblastoma cells reveals a diversity of malignant transformations
GSE130645	Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches
GSE130762	Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [AmpliSeq]
GSE130882	Evaluation of ultra-low input RNA sequencing for the study of human T cell transcriptome
GSE131137	RNA-sequencing of a clear cell renal cell carcinoma cell line, OS-RC-2
GSE131139	H3K27ac and BRD4-binding regions in a clear cell renal cell carcinoma cell line, OS-RC-2
GSE131201	ZAKα Recognizes Stalled Ribosomes through Partially Redundant Sensor Domains
GSE131507	Gene regulation by restoration of KMT2C in human colorectal cancer cells HCT116 and RKO
GSE131543	Gene amplification driven-long noncoding RNA SNHG17 regulates cell proliferation and migration in human non-small cell lung cancer
GSE132982	USP8 mutations determine genes’ expression profile of pituitary corticotroph adenomas, regardless of tumor functional status.
GSE133113	Genome-wide formation of G-quadruplex DNA structures originating from Long Interspersed Elements in Alzheimer’s disease neurons
GSE133247	Deregulation of neuro-developmental genes and primary cilium cytoskeleton anomalies in iPSC retinal sheets from human syndromic ciliopathies
GSE133630	TGF-beta couples pluripotency and epithelial character via ZNF398
GSE133979	The muscle and adipose transcriptome data from patients with PDAC cachexia
GSE133991	A multiparametric extraction method for the molecular characterization of Vn96-isolated plasma extracellular vesicles
GSE136009	Flow cytometric micronucleus assay and TGx-DDI transcriptomic biomarker analysis of ten genotoxic and non-genotoxic chemicals in human HepaRG™ cells
GSE136745	The human box C/D snoRNA U3 is a miRNA source
GSE136781	Non-functioning pituitary adenomas AmpliSeq data
GSE136920	EBF1 drives hallmark B cell gene expression by enabling the interaction of PAX5 with the MLL H3K4 methyltransferase complex
GSE137003	Cold-induced chromatin compaction and nuclear retention of clock mRNAs resets the circadian rhythm
GSE137317	Metformin-induced alterations in peripheral blood cell trancriptome of healthy individuals
GSE137587	Next-gen sequencing for transcriptomic differences in livers of mice with acetaminophen toxicity
GSE138634	Single-cell DNA replication sequencing (scRepli-seq): a method for mapping replication timing domains genome wide in single mammalian cells
GSE139868	TTF-1/NKX2-1 and ASCL1 binding regions in NCI-H209 and NKX2-1 binding regions in NCI-H441, replicate 2
GSE141326	Identification of miRNAs enriched in Extracellular vesicles derived from serum samples of breast cancer patients
GSE143670	S1PR3–G12-biased agonist ALESIA targets cancer metabolism and promotes glucose starvation
GSE144935	Epigenome-wide profiling uncovers novel pathway networks in human pulmonary arterial hypertension [ChIP-seq]
GSE144936	Epigenome-wide profiling uncovers novel pathway networks in human pulmonary arterial hypertension
GSE144955	Genome-wide mapping of 5-hydroxymethylcytosine enrichment in a novel model of 'NAFLD in a Dish'
GSE145018	The long non-coding RNA PIK3CD-AS2 promotes lung adenocarcinoma progression via YBX1-mediated suppression of p53 pathway
GSE145146	The small-molecule flunarizine in spinal muscular atrophy patient fibroblasts impacts on the Gemin components of the SMN complex and RNA-binding proteins relevant to motor neuron diseases
GSE145300	CGGBP1-regulated cytosine methylation at CTCF-binding motifs resists stochasticity
GSE146884	An in vitro model of chronic wounding and its implication for age-related macular degeneration
GSE147159	The role of NTS/NTSR1 signal in pancreatic cancer progression
GSE147527	Circulating RNA transcriptome of pregnant women with TSH just above the trimester-specific reference and its correlation with the hypertensive phenotype
GSE148964	Identification of fetal unmodified and 5-hydroxymethylated CGs in maternal cell-free DNA for non-invasive prenatal testing
GSE151420	Transcriptome analysis of normal oral cells and oral cancer cells treated with elemental diet (ED) Elental®
GSE151561	MicroRNA Sequencing of CD34+ Sorted Adipose Stem Cells (ASCs) Undergoing Endotheliogenesis
GSE152015	RNA-seq analysis of A549 cells harboring Smad3 R104K A105P mutation.
GSE152195	Concurrent depletion of Vps37 proteins evokes inflammatory response and cell growth inhibition via ESCRT-I destabilization.
GSE152331	Gene expression profile of TPT1 gene knock downed human ES-NSC
GSE152414	RNA-seq in Hs578T cells stimulated with TGF-β
GSE153292	lincNORS: A Noncoding Regulator of the Cellular Sterol Homeostasis II
GSE153293	lincNORS: A Noncoding Regulator of the Cellular Sterol Homeostasis
GSE153315	Transcriptome analysis of Newly Diagnosed Type 2 Diabetes Subjects identifies genes to predict Metformin drug Response
GSE153468	Whole-organ analysis of TGF-b-mediated remodelling of the tumour microenvironment
GSE153473	Regulation of translation by site-specific ribosomal RNA methylation [RiboMeth-Seq]
GSE153476	Regulation of translation by site-specific ribosomal RNA methylation.
GSE153502	Profiling of ribose methylations in ribosomal RNA from diffuse large B-cell lymphoma patients for evaluation of ribosomes as drug targets
GSE153519	Dynamic extrinsic pacing of the HOX clock in human axial progenitors control motor neuron subtype specification
GSE153742	Ion AmpliSeq transcriptome analysis of atypical hepatocytes
GSE153792	Whole-blood transcriptome profiling reveals signatures of metformin and its therapeutic response
GSE155459	Gene expression analysis of U937 cells during the differentiation by phorbol 12-myristate 13-acetate (PMA)
GSE155584	Airway Progenitor Clone Formation Is Enhanced by Y-27632–Dependent Changes in the Transcriptome
GSE156205	Small RNA sequencing of HCV infected hepatoma cells
GSE156645	A chimpanzee adenovirus-vectored single dose therapeutic vaccine for post kala azar dermal leishmaniasis
GSE156911	Early developmental alteration of neurite outgrowth occurs besides late-appearing neurodegenerative processes in Wolfram syndrome
GSE157148	Expression of the olfactory receptors OR6X1 and OR4E2 decreases in hypothyroidism and is reversible with levothyroxine treatment in pregnancy
GSE157153	Gene expression profiling in endometriosis and ovarian cancer
GSE158890	Transcriptome analysis using Quant-RNAseq after NPM1 or HIF-1α silencing under normoxia or Hypoxia
GSE159333	Expression data of iPS microglia treated with TREM2 agonist antibody
GSE159559	FAM83H-AS1 is a non-coding oncogenic driver and therapeutic target of lung adenocarcinoma
GSE160099	COCO/DAND5 inhibits developmental and pathological ocular angiogenesis
GSE160195	Medication for acromegaly reduces expression of MUC16, MACC1 and GRHL2 in pituitary neuroendocrine tumour tissue
GSE160286	Transcriptional regulation of cellular mechanosignaling by PREP1 (PKNOX1)
GSE160391	Analysis of micro-RNA expression profiles in human islets and islet-derived exosomes during cytokine mediated β cell stress and death
GSE160570	Characterization of Mutational Status, Spheroid Formation, and Drug Response of a New Genomically-Stable Human Ovarian Clear Cell Carcinoma Cell Line, 105C (Oncomine)
GSE160571	Characterization of Mutational Status, Spheroid Formation, and Drug Response of a New Genomically-Stable Human Ovarian Clear Cell Carcinoma Cell Line, 105C
GSE160879	Circulating microRNAs associated with liver fibrosis in chronic hepatitis C patients
GSE161029	Differentially expressed genes in myotubes derived from MBNL knockouts hiPSCs generated by CRISPR/Cas9
GSE162056	Expression of genes related to H. pylori infection and its virulence factor CagA, in AGS cells
GSE162125	CPD-seq map of UV damage formation in isolated human genomic DNA
GSE163148	Robust parameter design of human induced pluripotent stem cell differentiation protocols defines lineage‐specific induction of anterior‐posterior gut tube endodermal cells
GSE163178	Transcriptome analysis among young and senescent fibroblasts expressing shLuciferase or shFbxo22
GSE163877	Simultaneous sequencing of coding and non-coding RNA from patients with Alzheimer's disease
GSE164227	Small RNAseq of MV3 melanoma cells overexpressing MCPIP1 protein
GSE165251	Nuclear and Cytoplasmic HEK293 Cell 3' end mRNA-seq
GSE166279	Differential microRNA Expression in USP8-Mutated and Wild-Type Corticotroph Pituitary Tumors Reflect the Difference in Protein Ubiquitination Processes
GSE167233	A novel ERK substrate regulates wide varieries of IEGs
GSE168813	Inflammatory gene expression profiling in peripheral blood from patients with Alzheimer’s disease reveals key pathways and hub genes with potential diagnostic utility
GSE172053	IFNγ induces a dynamic and complex transcriptional, chromatin and enhancer landscape
GSE174443	Integrated transcriptomic analysis of human tuberculosis granulomas and a biomimetic model identifies therapeutic targets
GSE175590	UVDE-seq map of 6-4PP formation in normal human skin fibroblasts
GSE175624	The contribution of lipid droplets formation-related genes during adipogenesis to osteoblastogenesis
GSE176077	RNA-seq profiling of salivary transcriptome reveals potential diagnostic RNAs and oral microbial dysbiosis in oral squamous cell carcinoma
GSE176133	Gene expression profiles analyzed using integrating RNA sequencing and microarray reveals increased inflammatory response, proliferation, and osteoclastogenesis in pigmented villonodular synovitis
GSE176153	Differentially Expressed Mitochondrial Circulating mRNA in Hypothyroidism Could Be Useful as a Survivor Biomarker in Nonthyroidal Illness Syndrome
GSE176541	CDK9 and PP2A regulate RNA polymerase II transcription termination and coupled RNA maturation
GSE178458	RNA seq analysis of U251 and A549 cells transduced with tet-pLKO1-SHC016 control shRNA
GSE178611	DLEU1 promotes oral squamous cell carcinoma progression through activating interferon-stimulated genes [ChIP-Seq]
GSE178613	DLEU1 promotes oral squamous cell carcinoma progression through activating interferon-stimulated genes
GSE178665	ESCRT-I controls lysosomal membrane protein homeostasis and restricts MCOLN1-dependent TFEB/TFE3 signaling.
GSE178830	IRF3 and Smad3 binding regions in a basal-like breast cancer cell line, BT549 transfected with polyI:C.
GSE179223	RNA-seq analysis evaluating cell cycle specific gene expression and the effect of KRTAP2-3 gene inactivation in SAS cells expressing Fucci.
GSE179306	Mapping Human Transient Transcriptomes Using Single Nucleotide Resolution 4sU Sequencing (SNU-Seq)
GSE179465	Transcriptome analysis among young and senescent fibroblasts
GSE180252	ChIP-seq and RNA-seq of Human progenitor epidermal keratinocytes (HPEK) and HaCaT cells
GSE180782	Chlamydia trachomatis induces the transcriptional activity of host YAP in a Hippo-independent fashion
GSE180784	Chlamydia trachomatis induces the transcriptional activity of host YAP in a Hippo-independent fashion
GSE181718	RNASeq of Candida-stimulated CD3+ T-cells from individuals with CARD9 mutations and normal controls
GSE182520	Human retinal organoids release extracellular vesicles that regulate gene expression in target human retinal progenitors
GSE183942	Application of annotation-agnostic RNA sequencing data analysis tools for biomarker discovery in liquid biopsy.
GSE184316	Lung microenvironments and disease progression in fibrotic hypersensitivity pneumonitis
GSE185145	Expression data of human Tregs treated with TNFR2 agonist antibody
GSE188373	Gene expression profile upon CASP4 knockdown in oncogene-induced senescence
GSE188457	IRF3 binding regions in a basal-like breast cancer cell line, BT549 cells with Smad3 gene inactivation, transfected with polyI:C.
GSE188498	Antisense oligonucleotides targeting the miR-29b binding site in the GRN mRNA increase progranulin translation
GSE188623	Characterization of a new class of RNA products from the Pax-5 oncogene: circular RNAs
GSE189303	Smad3 binding regions in human epidermal keratinocytes (HaCaT).
GSE189314	A two-color haploid genetic screen identifies novel host factors involved in HIV-1 latency
GSE189996	Alveolar macrophage immunobiology and functional genomics: Unlocking human to human variation in host response to M. tuberculosis
GSE192617	Transcriptomic alteration after miR-6126 tranfection into HepG2-NTCP
GSE193064	circZFR promote lung carcinogenesis and oxidative phosphorylation by modulating alternative splicing
GSE193337	Single-cell and bulk RNA-seq of human tumor-benign prostate adenocarinoma samples
GSE193566	Longitudinal gene expression profiling identifies a poor risk subset of patients with ABC-type Diffuse Large B Cell Lymphoma
GSE195694	Profiling and characterization of constitutive chromatin enriched RNAs
GSE196009	Gene expression between normal and cancer tissue for pancreatic cancer in Japan
GSE196059	Catchet-MS identifies IKZF1-targeting Thalidomide analogues as novel HIV-1 latency reversal agents
GSE196116	Human iPS-derived-keratinocytes, a new useful model to identify and explore pathological phenotype of Epidermolysis Bullosa Simplex.
GSE196700	Transcriptional comparison of Testicular Adrenal Rest Tumors with fetal and adult tissues
GSE198888	Generation of 3D tubular bile duct within human iPSC-derived liver organoid by incorporating human iPSC-derived blood vessel [RNA-seq]
GSE199168	CXCR4 DRIVES HEPATOCYTE REPROGRAMMING IN ALCOHOL-RELATED LIVER DISEASE
GSE200407	RNA-seq between between FOLFOX chemotherapy sensitivity and insensitivity in colorectal cancer
GSE201307	TANK binding kinase 1 induces transcription factor BACH1 to regulate iron metabolism in pancreatic cancer cells
GSE201972	FUS modulates the level of ribosomal RNA modifications by regulating a subset of snoRNA expression [RiboMeth-Seq]
GSE202531	FUS modulates the level of ribosomal RNA modifications by regulating a subset of snoRNA expression
GSE202937	A multi biomarker panel of miRNA-lncRNA interaction; a novel approach for early diagnosis of Acute coronary syndrome
GSE205022	Ribosomal RNA 2’-O-methylation dynamics during development and differentiation impact cell fate decisions
GSE208543	Activity and rational combinations of a novel, engineered chimeric, TRAIL-based ligand in diffuse large B-cell lymphoma
GSE209844	Loss of centrosomal gene ALMS1 alters lipid metabolism and the regulation of processes linked to the extracellular matrix.
GSE221185	Small RNA sequencing analysis of peptide-affinity isolated plasma extracellular vesicles distinguishes pancreatic cancer patients from non-affected individuals
GSE222639	Large scale production of melanocyte derived from pluripotent stem cells for biotherapeutic approaches to treat skin pigmentation disorders
GSE225840	Pasteurization of human milk affects the miRNA EVs cargo decreasing its immune modulatory activity
GSE226170	Effect of the lack of dystrophin on the gene expression profile of hiPSC-derived cardiomyocytes
GSE226646	Skeletal muscle transcriptomics dissects the pathogenesis of Friedreich's Ataxia
GSE228254	Mono and biallelic inactivation of Huntingtin gene in patient-specific iPS cells reveal HTT roles in striatal development and in neuronal functions impaired in Huntington’s disease
GSE228578	Transcriptomics and proteomics analyses reveal the anti-cancer properties of extract from Hypnea musciformis macroalgea in liver and intestinal cancer cells
GSE229801	SP140 ChIP-seq for Daudi and Ramos cell lines
GSE229802	Burkitt lymphoma cells (Ramos cell line), wild type and SP140 knockout
GSE230433	GPATCH4 regulates rRNA and snRNA 2'-O-methylation in both DHX15-dependent and -independent manners
GSE233483	A human iPSC-derived multilineage liver organoid model containing Kupffer cells to study human sepsis-associated liver dysfunction [KuLOs]
GSE233538	A human iPSC-derived multilineage liver organoid model containing Kupffer cells to study human sepsis-associated liver dysfunction [hiPSC-EMP-KC-pKC]
GSE233539	A human iPSC-derived multilineage liver organoid model containing Kupffer cells to study human sepsis-associated liver dysfunction
GSE234099	RNA sequencing of human CD8+ T cell subsets [MEM]
GSE234100	RNA sequencing of human CD8+ T cell subsets [TEX]
GSE235629	S-adenosylmethionine treatment affects histone methylation in prostate cancer cells
GSE235949	GPATCH4 regulates rRNA and snRNA 2’-O-methylation in both DHX15-dependent and -independent manners [RiboMeth-seq]
GSE236275	Expression of PVRL4, a molecular target for cancer treatment, is transcriptionally regulated by FOS family protein
GSE236871	Laminar shear stress regulated gene expression in HUVECs II
GSE239897	Mucosal immune alterations at the early onset of tissue destruction in Chronic Obstructive Pulmonary Disease
GSE240534	Generation of 3D tubular bile duct within human iPSC-derived liver organoid by incorporating human iPSC-derived blood vessel
GSE243647	Incorporation of human iPS cell-derived stroma creates a pancreatic cancer organoid with heterogeneous cancer-associated fibroblasts [AmpliSeq]
GSE243651	Incorporation of human iPS cell-derived stroma creates a pancreatic cancer organoid with heterogeneous cancer-associated fibroblasts
GSE245451	Transcriptome-wide analysis of hidradenitis suppurativa
GSE246429	ETV4-Dependent Transcriptional Plasticity Maintains MYC Expression and Results in IMiD Resistance in Multiple Myeloma [ChIP-seq]
GSE246435	ETV4-Dependent Transcriptional Plasticity Maintains MYC Expression and Results in IMiD Resistance in Multiple Myeloma [RNA-seq]
GSE246436	ETV4-Dependent Transcriptional Plasticity Maintains MYC Expression and Results in IMiD Resistance in Multiple Myeloma
GSE249213	Analysis of placenta-derived factor-treated human iPSC-liver organoid.
GSE249455	PCID2 dysregulates transcription and viral RNA processing to promote HIV-1 latency
GSE249672	A novel pancreatic ductal adenocarcinoma organoid recapitulating tumor microenvironment reveals macrophage-driven enhanced cancer cell survival [RNA-Seq]
GSE249673	A novel pancreatic ductal adenocarcinoma organoid recapitulating tumor microenvironment reveals macrophage-driven enhanced cancer cell survival
GSE252124	Discovery of Varicella zoster virus circular RNA with nanopore long-read sequencing
GSE255894	Identification of human gene expression induced by OSW-1 treatment
GSE255970	Identification of genes essential for the cell death induced by OSW-1 using the Genome-wide CRISPR-Cas9 knockout (GeCKO) screening
GSE261800	miRNome from 20 High-Grade Serous Ovarian Cancer Patients tissue and paired control ovarian tissue
GSE261832	Assessment of the molecular consequences associated with loss of dysferlin expression in hiPSC-derived muscle cells from LGMD R2 patients.
GSE266302	Cell of origin and expression profiles of pseudomyxoma peritonei derived from the appendix
GSE268564	A subset of human dermal fibroblasts overexpressing Cockayne syndrome group B protein resist UVB radiation-mediated premature senescence
GSE269533	miRNA profiling of human muscle and serum exosomes samples throughout TRAD and HITT training and detraining
GSE271565	Integrative analysis of patient-derived tumoroids and ex vivo organoid modeling of ARID1A loss in bladder cancer reveals therapeutic molecular targets
GSE271695	TFAP2A mediates HIF-1α dependent activation of hypoxia-inducible genes via interaction with Ku70/80 complex in a SUMO-dependent manner
GSE281593	Systems Biology-Based Assessment of Immune Responses to Whole Cell and Acellular Pertussis Vaccines: Rationale, Methodology and Enrollment Procedures for Omics Workflows
GSE281594	Systems Biology-Based Assessment of Immune Responses to Whole Cell and Acellular Pertussis Vaccines: Rationale, Methodology and Enrollment Procedures for Omics Workflows
GSE281660	A comparative analysis of tissue-based and liquid-based next-generation sequencing in patients with anaplastic thyroid carcinoma
GSE281999	microRNA profile of high-grade B-cell lymphoma with 11q aberration
GSE291650	OCT-2 is associated with pro-metastatic epigenomic properties of triple-negative breast cancer cells [ChIP-seq]
GSE292004	OCT-2 is associated with pro-metastatic epigenomic properties of triple-negative breast cancer cells
GSE293708	CD55 upregulation in T cells of COVID-19 patients suppresses type-I interferon responses [bulkRNA-seq]
GSE295807	MYLK-AS1 Enhances Glutamine Metabolism to Promote EGFR Inhibitor Resistance in Non-Small Cell Lung Cancer
GSE307443	Loss of cell-autonomously secreted laminin-α2 drives muscle stem cell dysfunction in LAMA2-related muscular dystrophy