| GSE43247 |
ChIP-seq analysis of PHF20 and Wdr5 binding sites in ESCs |
| GSE43390 |
Pausing of RNA polymerase II regulates mammalian developmental potential |
| GSE44935 |
The Role of Tet1 During Somatic Cell Reprogramming |
| GSE45157 |
Trans-chromosomal regulation by a novel lincRNA required for adipogenesis that escapes X-chromosome inactivation |
| GSE46748 |
Obesity, rather than diet, drives epigenomic alterations in colonic epithelium resembling cancer progression |
| GSE48206 |
Gene Expression Profile for knocking down Tet1 in pre-iPSCs culturing in Vc medium. |
| GSE48436 |
The THO complex regulates pluripotency gene mRNA export to control embryonic stem cell self-renewal and somatic cell reprogramming (RNA-IP) |
| GSE49137 |
INO80 complex in the core regulatory network governing ESC self-renewal [ChIP-Seq] |
| GSE49252 |
INO80 complex in the core regulatory network governing ESC self-renewal |
| GSE50776 |
c-Jun impedes somatic cell reprogramming by activating mesenchymal core regulators and suppressing pluripotent ones |
| GSE50907 |
fourSig: A Method for Determining Chromosomal Interactions in 4C-Seq Data |
| GSE51170 |
Identification of building principles of methylation states at CG rich regions by high-throughput editing of a mammalian genome |
| GSE51534 |
The THO complex regulates pluripotency gene mRNA export to control embryonic stem cell self-renewal and somatic cell reprogramming |
| GSE52279 |
Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation |
| GSE52281 |
4C-seq indicate interactive sites with the sequence close from Meis2 promoter |
| GSE52583 |
High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) |
| GSE52595 |
Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation (4C-seq) |
| GSE52988 |
Attenuated sensing of SHH underlies adaptive evolution of bovine limbs |
| GSE53755 |
Long-range joining of intra-chromosomal DNA double-strand breaks |
| GSE53913 |
RNF17 referees ping-pong in mouse testes [RNAseq] |
| GSE53915 |
RNF17 blocks promiscuous activity of PIWI proteins in mouse testes [5'RACE] |
| GSE53919 |
RNF17 blocks promiscuous activity of PIWI proteins in mouse testes |
| GSE54515 |
Small RNA analysis for fetal testes of Hsp90-alpha knockout mice |
| GSE54561 |
Transcriptome analysis of Th2 CD4+ T cells differentiated from wild-type and NLRP3KO mice |
| GSE54697 |
Transcriptome analysis of Th9 CD4+ T cells differentiated with or without Il-1beta |
| GSE54863 |
FIREWACh: High-throughput Functional Detection of Transcriptional Regulatory Modules in Mammalian Cells |
| GSE57125 |
Macrophage Precursor Cells from the Left Atrial Appendage of the Adult Heart Spontaneously Reprogram into a C-kit+/CD45- Stem Cell-Like Phenotype [RNA-Seq] |
| GSE57126 |
Macrophage Precursor Cells from the Left Atrial Appendage of the Adult Heart Spontaneously Reprogram into a C-kit+/CD45- Stem Cell-Like Phenotype |
| GSE57411 |
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation [Bisulfite-Seq] |
| GSE57413 |
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation |
| GSE57546 |
A Direct and Accelerated Platform for Analyzing Reprogramming by Defined factors |
| GSE58101 |
High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm |
| GSE58129 |
Postnatal Development is Associated with Genome-scale Changes in DNA methylation in Mouse Liver |
| GSE58339 |
A Sox2 distal enhancer cluster regulates embryonic stem cell differentiation potential |
| GSE58599 |
High-throughput sequencing of genome-wide translocations from stimulated wild-type or ATM-deficient B cells |
| GSE59324 |
Molecular profiling of activated olfactory neurons identifies odorant receptors for odors in vivo |
| GSE60077 |
Length-dependent gene misregulation in Rett syndrome |
| GSE60425 |
Identification of RNAs associated with telomeres by enChIP-RNA-Seq |
| GSE60599 |
Genome wide transcriptome analysis of skin harboring tissue-resident memory CD8+ T cells |
| GSE60768 |
BATSeq of ESC-FCS/ESC-2i/NSC |
| GSE61247 |
ChIP-seq profiling of loci bound by HIF1a in wild-type E12.5 hearts |
| GSE61694 |
MEF_OSK_O_KS_T20 |
| GSE62050 |
High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq using drop-based microfluidics |
| GSE62151 |
Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes |
| GSE62534 |
Hairpin Capture of DNA End Structures reveals chromosomal DNA end structure with single nucleotide resolution |
| GSE63961 |
Analysis of wildtype and Csnk2b-deficient Foxp3+ regulatory T cells transcriptomes |
| GSE64365 |
Degree of Recruitment of DOT1L to MLL-AF9 Defines Level of H3K79 Di- and Tri-methylation on Target Genes and Transformation Potential |
| GSE64749 |
Chromatin interaction analysis of transcription factors and NLRP3 in CD4+ T cells differentiated from wild-type and NLRP3KO mice |
| GSE64960 |
Sexual cell fate reprogramming in the ovary by DMRT1 |
| GSE65510 |
Transient Pairing of Homologous Oct4 Alleles Accompanies the Onset of Embryonic Stem Cell Differentiation |
| GSE65525 |
Droplet barcoding for single cell transcriptomics applied to embryonic stem cells |
| GSE65865 |
Low-grade glioma microglia |
| GSE66092 |
PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage. |
| GSE66230 |
Subcellular whole transcriptome profiling reveals the RNA composition of motor axons |
| GSE67171 |
Precocious Interleukin 21 expression in naïve mice defines a novel stage of T-follicular helper cell development |
| GSE67292 |
Length-dependent gene misregulation in Rett syndrome (Bisulfite-Seq 2) |
| GSE67516 |
A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation |
| GSE67634 |
Altered interactions between the gut microbiome and colonic mucosa precede polyposis in APCMin/+ mice |
| GSE67959 |
Multiplexed analysis of chromosome conformation at vastly improved sensitivity |
| GSE67960 |
The kinase DYRK1A reciprocally regulates the differentiation of Th17 and regulatory T cells [seq] |
| GSE67961 |
The kinase DYRK1A reciprocally regulates the differentiation of Th17 and regulatory T cells |
| GSE68140 |
Differential gene regulation downstream of murine Tmem173 variants |
| GSE68376 |
Interleukin-1 signaling is involved in local self-renewal and maintenance of microglia |
| GSE68574 |
A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways [mESCs] |
| GSE68575 |
A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways [T-cells] |
| GSE68576 |
A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways |
| GSE68682 |
Cell density, Her2 and progesterone signaling regulate dissemination of breast cancer cells [miRNA-Seq] |
| GSE68683 |
Cell density, Her2 and progesterone signaling regulate dissemination of breast cancer cells |
| GSE68699 |
A biogenesis step upstream of Microprocessor controls miR-17~92 expression |
| GSE68902 |
Direct Induction of Neurons from Various Cell Types by Chemical Defined Medium |
| GSE69186 |
Small and large RNA sequencing of mouse livers receiving small hairpin RNAs |
| GSE69887 |
PAR-TERRA RNA directs homologous sex chromosome pairing |
| GSE69926 |
Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion |
| GSE70181 |
Comparison of Hi-C results using in-solution versus in-nucleus ligation |
| GSE70317 |
Reporter Gene Silencing in Targeted Mouse Mutants is Associated with Promoter CpG Island Methylation |
| GSE70930 |
Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming |
| GSE71005 |
Orientation-Specific Joining of AID-initiated DNA Breaks Promotes Antibody Class Switching |
| GSE71154 |
m6A-CLIP identified major presence of m6A in last exons |
| GSE71162 |
A mechanism for expansion of the regulatory T cell repertoire and its role in enforcing self-tolerance |
| GSE71585 |
Adult mouse cortical cell taxonomy by single cell transcriptomics |
| GSE71834 |
Quantification of RNA editing in MEF cells of different genetic backgrounds with and without interferon treatment |
| GSE71863 |
Whole genome nucleosome positioning by MNase-Seq on the mouse tumor line, RMA |
| GSE71882 |
Dzip3 regulates developmental genes in mouse embryonic stem cells by reorganizing 3D chromatin conformation [RNA-seq] |
| GSE71883 |
Dzip3 regulates developmental genes in mouse embryonic stem cells by reorganizing 3D chromatin conformation [ChIP-seq] |
| GSE71884 |
Dzip3 regulates developmental genes in mouse embryonic stem cells by reorganizing 3D chromatin conformation |
| GSE72608 |
Intergenerational consequences of gene-environment induced epigenetic dynamics at rDNA in the mouse (Bis-PCR) |
| GSE72610 |
Intergenerational consequences of gene-environment induced epigenetic dynamics at rDNA in the mouse |
| GSE72897 |
EWS-FLI1-induced osteosarcoma model unveiled a crucial role of impaired osteogenic differentiation on osteosarcoma development [ChIP-seq] |
| GSE72898 |
EWS-FLI1-induced osteosarcoma model unveiled a crucial role of impaired osteogenic differentiation on osteosarcoma development |
| GSE73007 |
On-target and Off-target Activities of RAG Are Restricted by Topological Chromatin Domains |
| GSE73049 |
genes regulated by mitoflash |
| GSE73058 |
miRNA-target chimeras identified with CLEAR-CLIP reveal miRNA 3' end pairing as a major determinant of Argonaute binding in vivo [mouse cortex CLEAR-CLIP] |
| GSE73059 |
miRNA-target chimeras identified with CLEAR-CLIP reveal miRNA 3' end pairing as a major determinant of Argonaute binding in vivo |
| GSE73100 |
NGS-mRNA in colonic mucosal tissues in wild type control and Sgo1-/+ |
| GSE73225 |
SOX9 modulates the expression of key transcription factors required for heart valve development |
| GSE73698 |
Engineered mammalian RNAi can elicit antiviral protection that negates the requirement for the interferon response |
| GSE73932 |
Transcriptome profiling of murine lungs after treatment with vector to deplete endogenous miRNAs |
| GSE74356 |
Long Neural Genes Harbor Recurrent DNA Break Clusters in Neural Stem/Progenitor Cells |
| GSE75851 |
ILC progenitor CEL-seq |
| GSE75975 |
Genome-scale DNA methylation oscillations in pluripotent cells |
| GSE76318 |
High-Throughput mapping of the regulatory DNA |
| GSE76483 |
Simultaneous profiling of transcriptome and DNA methylome from a single cell |
| GSE77045 |
Circulating extracellular RNA markers of liver regeneration |
| GSE77101 |
hnRNP R and its main interactor, the noncoding RNA 7SK, coregulate the axonal transcriptome of motoneurons |
| GSE77553 |
Capturing pairwise and multi-way chromosomal conformations using C-walks |
| GSE77621 |
Multiplex bisulfite sequencing identifies differentially methylated regions in target genes in embryonic cardiomyocytes following knockdown of DNMT3a or DNMT3b expression |
| GSE77788 |
Phosphatidylinositol 3-Kinase (PI3K) delta blockade increases genomic instability in B cells |
| GSE78505 |
Regulation of Th17 cell pathogenic function by miR-183/96/182 |
| GSE78800 |
Dissection of a super-enhancer in vivo (ATAC-seq) |
| GSE78803 |
Dissection of a super-enhancer in vivo (Capture-C) |
| GSE78835 |
Genetic dissection of the α-globin super-enhancer |
| GSE78849 |
Investigation of the effect of succinate and dimethyl malonate on murine bone-marrow derived macrophages (BMDMs) treated with or without LPS |
| GSE79178 |
Pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice. [iCLIP] |
| GSE79179 |
Pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice |
| GSE79363 |
Single-cell RNA-seq reveals disparate macrophage responses to intracellular Salmonella |
| GSE79654 |
RISC-mediated control of selected chromatin regulators stabilizes ground state pluripotency of mouse embryonic stem cells (miRNA-Seq) |
| GSE79655 |
RISC-mediated control of selected chromatin regulators stabilizes ground state pluripotency of mouse embryonic stem cells |
| GSE79775 |
Postnatal Development is Associated with Genome-scale Changes in DNA Methylation in Mouse Liver |
| GSE79892 |
Orientation-specific RAG activity in chromosomal loop domain contribute to Tcrd V(D)J recombination during T cell development |
| GSE79895 |
Imprinted DNA methylation reconstituted at a non-imprinted locus |
| GSE80105 |
Synergistic model of chromatin predicts Dnase-I accessibility |
| GSE80280 |
3D structures of individual mammalian genomes reveal principles of nuclear organization |
| GSE81255 |
Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ATAC-seq] |
| GSE81258 |
Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility |
| GSE81351 |
An ectopic CTCF binding element disturbs Vδ usage at the mouse Tcra-Tcrd locus by regulating contact between Vδ and Dδ gene segments |
| GSE81464 |
Multiplex bisulfite sequencing identifies differentially methylated regions in target genes in embryonic cardiomyocytes following knockdown of DNMT1 expression |
| GSE82126 |
A Highly Sensitive and Unbiased Approach for Elucidating Antibody Repertoires |
| GSE82255 |
Destabilization of B2 RNA by EZH2 activates the stress response |
| GSE83289 |
The balance of Influenza A Virus segments is achieved by virus-derived small non-coding RNAs |
| GSE83368 |
POLRMT regulates the switch between replication-primer formation and gene expression of mammalian mtDNA |
| GSE83757 |
NFIA Controls the Brown Fat Gene Program by Co-Localizing with PPARgamma at Cell-Type-Specific Enhancers (chromatin) |
| GSE83764 |
NFIA Controls the Brown Fat Gene Program by Co-Localizing with PPARgamma at Cell-Type-Specific Enhancers |
| GSE83885 |
Genome-wide effect of constitutive interferon on gene-expression |
| GSE84102 |
The PAXX and XLF DNA Repair Factors are Functionally Redundant in Joining DNA breaks in a G1-arrested Progenitor B Cell Line |
| GSE84383 |
NGS-mRNA in lung tissues in RAG1-/- and in RAG1-/- Sgo1-/+ mice |
| GSE84527 |
Histone H2A T120 phophorylation promotes oncogenic transformation via upregulation of cyclin D1 [RNA-seq] |
| GSE84589 |
Cis-regulatory landscape of four cell types of the retina |
| GSE84695 |
Exposure to mixture of Environmental endocrine disruptors induce miRNAs/isomiRs deregulation in mouse testis |
| GSE84761 |
Inactivation of Ezh2 upregulates Gfi1 and drives aggressive Myc-driven Group 3 medulloblastoma [ChIP-Seq] |
| GSE84762 |
Inactivation of Ezh2 upregulates Gfi1 and drives aggressive Myc-driven Group 3 medulloblastoma |
| GSE84785 |
RNA-seq data is shaped in characteristic ways by polymerase processivities |
| GSE84888 |
Distinct roles for motif affinity, chromatin state, and co-regulatory motifs in PPARγ binding and enhancer activity |
| GSE84968 |
Histone H2A T120 phophorylation promotes oncogenic transformation via upregulation of cyclin D1y |
| GSE85484 |
Analysis of transcriptomes of naive CD4+ T cells, polarized under Th17 cell skewing conditions for 24h in presence or abscence of CK2 Inhibitor |
| GSE85518 |
B2 SINE expression during MHV68 infecton |
| GSE85731 |
Epigenetic memory of obesity in mouse colonic epithelium |
| GSE86227 |
HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons [hnRNPA2B1_small_rnaseq] |
| GSE86464 |
HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons |
| GSE86788 |
Actively translating transcriptome (Ribotag) profiling of mouse retinal endothelial cells during postnatal development |
| GSE86850 |
Gene expression profiling of IL7R+PIR+ and IL7R-PIR- subsets in LIN-c-Kit+ E12.5 mouse fetal liver cells |
| GSE86964 |
Target enrichment followed by high throughput sequencing of telomeric DDRNAs in telomere-deprotected mouse cells |
| GSE87165 |
Sequencing analysis for 5hmC pull-down DNA |
| GSE87533 |
Small RNA Sequencing of mouse amygdala after knockdown of miR-15a |
| GSE87548 |
Layer-specific ATAC-seq of the neurons of adult mouse visual cortex defined by Cre-driver lines |
| GSE87747 |
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [Bisulfite-Seq] |
| GSE87749 |
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 |
| GSE89361 |
Genome-wide effect of STING-mediated activation in T cells |
| GSE89371 |
A genome-wide CRISPR activation screen identifies B4GALNT2 as an inhibitory host factor for influenza virus infection |
| GSE89696 |
A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells [smallRNA-Seq] |
| GSE89698 |
A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells |
| GSE89832 |
HEPATIC DEFICIENCY OF THE PIONEER TRANSCRIPTION FACTOR FOXA RESTRICTS HEPATITIS B VIRUS BIOSYNTHESIS BY THE DEVELOPMENTAL REGULATION OF VIRAL DNA METHYLATION |
| GSE90106 |
The tumor suppressor menin prevents effector CD8 T cell dysfunction by targeting mTORC1-dependent metabolic activation [RNA-seq] |
| GSE90165 |
The tumor suppressor menin prevents effector CD8 T cell dysfunction by targeting mTORC1-dependent metabolic activation |
| GSE90487 |
Dissecting immune circuits by linking CRISPR pooled screens with single cell RNA-seq [SET2] |
| GSE90488 |
Dissecting immune circuits by linking CRISPR pooled screens with single cell RNA-seq |
| GSE90702 |
Identification of the embryonic germ cell Meioc-/- transcriptome, MEIOC targets in postnatal testis, and YTHDC2 targets in postnatal testis in mouse |
| GSE92590 |
Simultaneous transcriptional and epigenomic profiling from specific cell types within heterogeneous tissues in vivo |
| GSE92597 |
Aire, guardian of immunological tolerance, binds to and activates super-enhancers [ChIP-seq] |
| GSE92641 |
Uhrf1 is indispensable for normal limb growth by regulating chondrocyte differentiation |
| GSE92654 |
Aire, guardian of immunological tolerance, binds to and activates super-enhancers |
| GSE92942 |
DNMT3b ChIP-Seq in enteric precursor cells |
| GSE93848 |
High-throughput manual-quality annotation of full-length long noncoding RNAs with Capture Long-Read Sequencing (CLS) |
| GSE93941 |
MLL2 conveys transcription-independent H3K4me3 in the oocyte |
| GSE94005 |
Small RNA sequencing of wild-type and Mrpp3 knock out mouse heart mitochondria |
| GSE94030 |
Circularized RNA sequencing of wild-type and Mrpp3 knock out mouse heart mitochondria |
| GSE94054 |
cTag-PAPERCLIP Reveals Alternative Polyadenylation Promotes Cell-Type Specific Protein Diversity and Shifts Araf Isoforms with Microglia Activation |
| GSE94383 |
Measuring signaling and RNA-Seq in the same cell links gene expression to dynamic patterns of NF-κB activation |
| GSE94489 |
Cell cycle dynamics of chromosomal organisation at single-cell resolution |
| GSE95113 |
The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [ChIP-Seq 1] |
| GSE95116 |
The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture |
| GSE95317 |
Transcriptional profiling of irritant contact dermatitis (ICD) in a mouse model identifies specific patterns of gene expression and immune-regulation |
| GSE95487 |
Gene expression profiling of CD45+CD3-CD11b+MHCII+ subsets in P5 (day 5 after birth) and 1.5M (1.5 months after birth) mouse epidermal cells |
| GSE95826 |
Tcrd rearrangement redirects a processive Tcra recombination program to expand the Tcra repertoire |
| GSE96052 |
ZFP36 RNA binding proteins restrain T-cell activation kinetics and anti-viral immunity [ribo-seq] |
| GSE96074 |
ZFP36 RNA binding proteins restrain T-cell activation and anti-viral immunity [HITS-CLIP] |
| GSE96076 |
ZFP36 RNA binding proteins restrain T-cell activation kinetics and anti-viral immunity |
| GSE96889 |
Transcriptome profiling of primary murine fibroblast response to IFNB with or without prior Drosha depletion |
| GSE96920 |
Identification of MEIOC targets in mouse postnatal testis |
| GSE96921 |
Identification of YTHDC2 targets in mouse postnatal testis |
| GSE97148 |
Clonally stable Vκ allelic choice instructs Igκ repertoire |
| GSE97195 |
Deep sequencing and high-throughput analysis of PIWI-associated small RNAs |
| GSE97390 |
Mouse embryonic stem cells can differentiate via multiple paths to the same state [RNA-seq] |
| GSE97391 |
Mouse embryonic stem cells can differentiate via multiple paths to the same state |
| GSE97571 |
Selective induction of homeostatic Th17 cells in the murine intestine by cholera toxin interacting with the microbiota |
| GSE97669 |
Promoter of lncRNA gene *PVT1* is a tumor suppressor DNA element |
| GSE97866 |
Tissue-specific CTCF/Cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo (ATAC-Seq) |
| GSE97867 |
Tissue-specific CTCF/Cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo (Capture-C" |
| GSE97871 |
Tissue-specific CTCF/Cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo |
| GSE98266 |
TFEB target in epithelial cells during DSS colitis |
| GSE98542 |
Methyl-Spec-seq control data sets |
| GSE98686 |
Methyl-Spec-seq control data sets |
| GSE98713 |
MicroRNAs-wide analysis of primordial germ and somatic cells reveals sexual and developmental differential functional regulation in mouse embryonic gonads |
| GSE98725 |
Transcriptional Regulation by NFATc1 in CD8+ T cells [RNA-seq] |
| GSE98726 |
Transcriptional Regulation by NFATc1 in CD8+ T cells |
| GSE99017 |
Temporal Control of Mammalian Cortical Neurogenesis by m6A Methylation |
| GSE99257 |
Robust detection of chromosomal contacts from small cell numbers using low-input Capture-C |
| GSE99335 |
Uhrf1 is indispensable for normal limb growth by regulating chondrocyte differentiation through specific gene expression |
| GSE99784 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Nrl-/- Retinal Transcriptomes |
| GSE100119 |
Genome editing reveals a role for OCT4 in human preimplantation development [MiSeq] |
| GSE100120 |
Uncovering mechanisms of early human lineage specification by CRISPR/Cas9-mediated genome editing |
| GSE101984 |
Diversity amongst trigeminal neurons revealed by high throughput single cell sequencing |
| GSE102181 |
Yap/Taz negatively regulate bone angiogenesis and osteogenesis |
| GSE102253 |
The role of TEFM in mitochondrial gene expression [smallRNA] |
| GSE102254 |
The role of TEFM in mitochondrial gene expression [TruSeq] |
| GSE102255 |
The role of TEFM in mitochondrial gene expression |
| GSE102447 |
Pervasive transcription and endosiRNAs restrain transposons during global demethylation in embryonic stem cells [smallRNA-Seq 2] |
| GSE102449 |
DNA methylation profiling by MBD-Seq in the mouse seminal vesicles (SVs) and uterus (U) following neonatal DES exposure |
| GSE102450 |
Gene expression and DNA methylation profiling in the seminal vesicles (SVs) from neonatal DES-treated mice |
| GSE102614 |
Determination of direct binding targets of Quaking RNA binding proteins |
| GSE102615 |
Quaking isoform depletion in C2C12 myoblasts; direct binding targets of Quaking RNA binding proteins |
| GSE102845 |
Target-Enrichment Sequencing for Detailed Characterization of Small RNAs |
| GSE103247 |
Qki5 CLIP in E14.5 mouse brain |
| GSE103248 |
RNAseq in control and shQk KD mouse neural stem cells, and Qki5 CLIP in E14.5 mouse brain |
| GSE103297 |
GLIS3 is indispensable for TSH/TSHR-dependent thyroid hormone biosynthesis and follicular cell proliferation |
| GSE103315 |
NOVA2 cTag-CLIP |
| GSE103316 |
NOVA2 cTag-CLIP and Nova2-cKO RNA-seq in mouse brain |
| GSE103478 |
Caloric restriction affects small RNA expression in mouse hepatic mitochondria |
| GSE103543 |
Internally Calibrated ChIP-seq (ICeChIP-seq) using a large panel of antibodies against H3K4 methylations to measure genome-wide histone modification density in mammalian cells |
| GSE103624 |
BRCA1 suppresses microhomology-mediated tandem duplications at Tus/Ter-stalled replication forks |
| GSE103765 |
Function of 5C medium in somatic cell reprogramming |
| GSE103791 |
The comparation of transcriptome between MEF and mES |
| GSE103999 |
CREB Coactivators CRTC2 and CRTC3 Modulate Bone Marrow Hematopoiesis |
| GSE104025 |
Elavl HITS-CLIP |
| GSE104030 |
Transcriptome profiling of liver samples from WT and AKAP12 KO mice after inducing fibrosis resolution |
| GSE104037 |
AGO CLIP reveals an activated network for acute regulation of brain glutamate homeostasis in ischemic stroke [dataset 3] |
| GSE104043 |
AGO CLIP reveals an activated network for acute regulation of brain glutamate homeostasis in ischemic stroke [dataset 4] |
| GSE104047 |
AGO CLIP reveals an activated network for acute regulation of brain glutamate homeostasis in ischemic stroke [dataset 5] |
| GSE104053 |
AGO CLIP reveals an activated network for acute regulation of brain glutamate homeostasis in ischemic stroke |
| GSE104098 |
The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [ChIP-Seq 2] |
| GSE104104 |
Whole mitochondrial genome bisulfite sequencing (WmGBS) analysis for the mouse brain, liver, and embryonic stem cells |
| GSE104111 |
BCR heavy and light chain repertoire sequencing of pertitoneal cavity B-1a cells from wild-type and Igll1 knockout mice |
| GSE104389 |
Genome-wide analysis of the histone variant H3mm7 |
| GSE104555 |
Chemical reprogramming of mouse embryonic and adult fibroblast into endoderm lineage |
| GSE104810 |
Genome-wide mapping of H3K79me2 in EPZ5676-treated lymphatic endothelial cells [RNA-Seq] |
| GSE104811 |
Genome-wide mapping of H3K79me2 in EPZ5676-treated lymphatic endothelial cells |
| GSE106197 |
Next Generation Sequencing Facilitates Quantitative Analysis of allele specific transcription of PVT1 and MYC in mouse nueronal progenitor clonal cells |
| GSE106259 |
The HIV co-receptor CCR5, regulates the cellular architecture of osteoclast |
| GSE106458 |
Unbiased quantification of immunoglobulin diversity at the DNA level with VDJ-seq |
| GSE106822 |
Three classes of recurrent DNA break clusters in brain progenitors identified by 3D proximity-based break joining assay |
| GSE106922 |
DNA Double-strand Break Response Factors Influence End-joining Features of IgH Class Switch and General Translocation junctions |
| GSE107204 |
HydroxyMeDIPseq day 3 differentiated mouse ESCs |
| GSE107540 |
BisPCRSeq analysis of ribosomal DNA in mouse sperm exposed to protein restriction during different critical time windows |
| GSE107541 |
Early life diet conditions the molecular response to post-weaning protein restriction in the mouse |
| GSE107586 |
Profiling the transcriptome of layer 5 intratelencephalic-projection neurons (IT-PNs) in the mature mouse motor cortex |
| GSE107641 |
Klf4 has an unexpected protective role in perivascular cells within the microvasculature |
| GSE107675 |
A tissue-specific self-interacting chromatin domain forms independently of enhancer-promoter interactions |
| GSE107753 |
Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains [Capture-C] |
| GSE107755 |
Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains [Tri-C] |
| GSE107940 |
Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains |
| GSE108164 |
Microbial activities associated with human intestinal mucosal biofilms change mRNAs and microRNAs to promote carcinogenesis in mice [miRNA] |
| GSE108165 |
Microbial activities associated with human intestinal mucosal biofilms change mRNAs and microRNAs to promote carcinogenesis in mice |
| GSE108480 |
Differential 3’ Processing of Specific Transcripts Expands Regulatory and Protein Diversity Across Neuronal Cell Types |
| GSE108529 |
Gene expression profiling of GP2+ M cells and other epithelial cells in Peyer's patch |
| GSE108695 |
TET1 regulates reprogramming with Vitamin C and relatively small molecules |
| GSE109443 |
The cAMP inducible Coactivator CRTC3 Attenuates Brown Adipose Tissue Thermogenesis |
| GSE109545 |
A novel role of Tet1/2 proteins in cell cycle progression of trophoblast stem cells |
| GSE109732 |
Development of plasma cell-prone germinal center B cells |
| GSE110227 |
DNA methylation change involved in doxorubicin-induced testicular toxicity in mice |
| GSE110276 |
Analysis of in vivo (MOG/CFA) activated 2D2 T cells in presence or absence of NIK |
| GSE110603 |
Characterization of tissue-specific BMAL1 cistromes reveals new roles for enhancer-enhancer interactions in regulating rhythmic transcription [ChIA-PET] |
| GSE110604 |
Characterization of tissue-specific BMAL1 cistromes reveals new roles for enhancer-enhancer interactions in regulating rhythmic transcription |
| GSE111205 |
The bipartite TAD organization of the X-inactivation centre ensures opposing developmental regulation of Tsix and Xist |
| GSE111329 |
Knockdown of the Prolactin Receptor Inhibits Recruitment of Tregs and their Promotion of EMT in a Syngeneic Breast Cancer Model |
| GSE111664 |
Drop-seq analysis of bleomycin-treated and control mouse lung single-cell suspensions |
| GSE111805 |
Small and large RNA sequencing of mouse livers during development and after miR-122 exicision |
| GSE112177 |
A guide to single-cell transcriptomics in adult rodent brain: the medium spiny neuron transcriptome revisited |
| GSE112601 |
Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons |
| GSE112709 |
Extensive profiling of Foxk1 binding in genomic DNA |
| GSE112781 |
CTCF-Binding Elements Mediate Accessibility of RAG Substrates During Chromatin Scanning [dataset 1] |
| GSE112822 |
CTCF-Binding Elements Mediate Accessibility of RAG Substrates During Chromatin Scanning [dataset 2] |
| GSE113022 |
CTCF-Binding Elements Mediate Accessibility of RAG Substrates During Chromatin Scanning [dataset 3] |
| GSE113023 |
CTCF-Binding Elements Mediate Accessibility of RAG Substrates During Chromatin Scanning |
| GSE113293 |
Phenotyping spermatogenic defects by single-cell expression profiling |
| GSE114046 |
Tiled Capture-C |
| GSE114120 |
The impact on reprogramming of Msx2 |
| GSE114219 |
A single cell transcriptional portrait of embryoid body differentiation and comparison to progenitors of the developing embryo [bulk RNA-seq] |
| GSE114220 |
A single cell transcriptional portrait of embryoid body differentiation and comparison to progenitors of the developing embryo |
| GSE114285 |
Next Generation Sequencing Facilitates Quantitative Analysis of ES, pMN, MN, and IN Transcriptomes |
| GSE114594 |
Altered thymic differentiation and modulation of arthritis by invariant NKT cells expressing mutant ZAP70 [II] |
| GSE114595 |
Altered thymic differentiation and modulation of arthritis by invariant NKT cells expressing mutant ZAP70 |
| GSE115185 |
Brain RNAseq, comparing wild type and Sgo1 mouse |
| GSE115422 |
Transcriptome profiling of adult mouse bone marrow endothelial cells |
| GSE116163 |
DNA methylation oscillations at CpG poor enhancers in primed embryonic stem cells [amplicon-Seq] |
| GSE116202 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [BS-seq] |
| GSE116208 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer |
| GSE116290 |
PD-1/PD-L1 immune checkpoint and p53 loss facilitate tumor progression in activated B cell diffuse large B-cell lymphomas |
| GSE116491 |
16S profile of stool from conventional unifected and C.rodentium infected mice |
| GSE116649 |
Megadomains and superloops form dynamically during X-chromosome inactivation but are dispensable for silencing and escape |
| GSE116704 |
CG dinucleotides enhance promoter activity independent of DNA methylation |
| GSE116779 |
Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [RNA-seq] |
| GSE116784 |
Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq] |
| GSE116798 |
Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice |
| GSE117083 |
Gene expression profiling of brain cortex pericytes from control and Rbpj-knockout mice at P7 and P10 |
| GSE117119 |
BCR repertoire profiling of murine ABC-DLBCL-like tumors [targeted RNA-seq] |
| GSE117320 |
Distinct microglial transcriptional responses during opioid exposure or neuropathic pain [mouse] |
| GSE117321 |
Distinct microglial transcriptional responses during opioid exposure or neuropathic pain |
| GSE117377 |
Genetic models reveal cis and trans immune-regulatory activities for lincRNA-Cox2 in vivo (macrophages) |
| GSE117379 |
Genetic models reveal cis and trans immune-regulatory activities for lincRNA-Cox2 in vivo |
| GSE117628 |
Kinase-dependent structural role of DNA-PKcs during immunoglobulin class switch recombination |
| GSE117800 |
Epigenetic Enhancer Marks and Transcription Factor Binding Influence Vk Gene Rearrangement in Pre-B Cells and Pro-B Cells [VDJ-seq] |
| GSE117804 |
Epigenetic Enhancer Marks and Transcription Factor Binding Influence Vkappa Gene Rearrangement in Pre-B Cells and Pro-B Cells |
| GSE117963 |
Disease-relevant transcriptional signatures identified in individual smooth muscle cells from healthy mouse vessels |
| GSE118121 |
Chemical nucleoside conversion-based measurement of RNA stability by targeted and untargeted mRNA 3´ end sequencing |
| GSE118169 |
Effects of olfactory-specific Bcl11b overexpression on gene expression in the main olfactory epithelium of neonatal mice. |
| GSE118393 |
In vivo RNAi mediated knockdown of translation initiation factor eIF3m is associated with alterations in ribosome biogenesis (rRNA-seq) |
| GSE118395 |
In vivo RNAi mediated knockdown of translation initiation factor eIF3m is associated with alterations in ribosome biogenesis |
| GSE119097 |
SIS-seq, a molecular ‘time machine’, connects single cell fate with gene programs |
| GSE119120 |
Critical role of the UBL-domain in stimulating the E3 ubiquitin ligase activity of UHRF1 towards chromatin |
| GSE119148 |
Chromatin Conformation Dynamics are essential to Control the Transcription of INK4/ARF locus |
| GSE119202 |
Whole genome analysis of skin from three immunologically diverse mouse models |
| GSE119670 |
The expression of MHC class II molecules on murine breast tumors delays T cell exhaustion, expands the T cell repertoire and slows tumor growth |
| GSE120164 |
Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons [SPAR-seq] |
| GSE120393 |
Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development |
| GSE120666 |
Characterisation by Next generation Capture-C of Pax6 locus in three mouse cell lines (MV+, RAG and β-TC3 cells). |
| GSE120946 |
Bcl11b prevents catastrophic autoimmunity by controlling multiple aspects of regulatory T-cell gene expression program [RNA-Seq] |
| GSE120948 |
Bcl11b prevents catastrophic autoimmunity by controlling multiple aspects of regulatory T-cell gene expression program |
| GSE121118 |
Expression profile (nanoCAGE-seq), chromatin accessibility (ATAC-seq) profile, and histone modification profile (ChIP-seq for H3K4me3, H3K9me3, and H3K27me3) during the course of mouse gonocyte development |
| GSE121147 |
TCR sequencing of Treg and Tconv subsets from murine spleen |
| GSE121204 |
Transcriptomic and T-cell receptor profiling of Treg cells from lymphoid and vascular tissues |
| GSE121320 |
Zscan10 suppresses osteoclastgenesis by regulating expression of osteoclast differentiation inhibitory factors |
| GSE121355 |
A pliable mediator acts as a functional, rather than an architectural bridge, between promoters and enhancers |
| GSE121374 |
T cell regeneration from pluripotent stem cells by defined transcription factors [T cell receptors (TCR)] |
| GSE121375 |
T cell regeneration from pluripotent stem cells by defined transcription factors |
| GSE121386 |
Molecular and functional heterogeneity of IL-10-producing CD4+ T cells [Mouse SMART-seq2] |
| GSE121393 |
Molecular and functional heterogeneity of IL-10-producing CD4+ T cells |
| GSE121583 |
NF-κB1 (p50) impairs macrophage driven inflammatory response of the host against Helicobacter pylori infection |
| GSE121882 |
Unregulated APC activation by T cells breaks self-tolerance |
| GSE122450 |
Parkinson-associated SNCA enhancer variants revealed by open chromatin in mouse dopamine neurons |
| GSE122894 |
Pregnancy enables expansion of autoreactive regulatory T cells in an animal model of multiple sclerosis |
| GSE123346 |
MicroRNA profiling of mouse liver in response to DENV-1 infection by deep sequencing |
| GSE124596 |
A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary |
| GSE124995 |
Next-generation sequencing of murine trophoblast-derived and pregnancy-associated exosome-enriched extracellular vesicle microRNAs |
| GSE125053 |
High-resolution analysis of chromatin structure by Mnase-SSP |
| GSE125389 |
Anti-apoptotic regulation contributes successful nuclear reprogramming using cryopreserved oocytes |
| GSE125722 |
Increased expression of Kifc1 and Kifc5b targeting endogenous-siRNA contribute to the age-related decline in oocyte quality |
| GSE125740 |
Fusion of reprogramming factors alters trajectory of somatic lineage conversion |
| GSE125831 |
MAPCap enables high-resolution detection and differential expression analysis of transcription start sites |
| GSE125889 |
mRNA destabilization by BTG1 and BTG2 maintains T cell quiescence [mTAIL-seq] |
| GSE125890 |
mRNA destabilization by BTG1 and BTG2 maintains T cell quiescence |
| GSE126180 |
Bcor loss perturbs myeloid differentiation and promotes leukaemogenesis [TargetedCRISPRscreen] |
| GSE126264 |
Bcor loss perturbs myeloid differentiation and promotes leukaemogenesis |
| GSE126278 |
Characterization of tumor-infiltrating T cells by TCR-β repertoire analyses |
| GSE126281 |
Type I Interferon Delivery by iPSC-Derived Myeloid Cells Elicits Antitumor Immunity via XCR1+ Dendritic Cells |
| GSE126557 |
CREB mediates transient and sustained genomic responses to cAMP via distinct mechanisms [RNA-seq] |
| GSE126558 |
CREB mediates transient and sustained genomic responses to cAMP via distinct mechanisms |
| GSE126715 |
Modular structure and function of the XIST RNP in X chromosome inactivation |
| GSE127731 |
The nuclei of somatic cells fused to mouse embryonic stem cells express pluripotency markers similar to early reprogramming events |
| GSE127752 |
Multiplexed Cas9 targeting reveals genomic location effects and gRNA-based staggered breaks influencing mutation efficiency and patterns |
| GSE127846 |
FMRP cTag CLIP from mouse CA1 pyramidal neurons |
| GSE127847 |
The Fragile X protein, FMRP, has a cell-type specific role in CA1 hippocampal neurons to regulate transcripts encoding autism-spectrum proteins and circadian memory |
| GSE128579 |
Cas9/sgRNA selective targeting of the P23H Rhodopsin mutant allele for treating retinitis pigmentosa by intravitreal AAV9.PHP.B-based delivery |
| GSE128612 |
Methyl-CpG binding domain 2 (Mbd2) is an Epigenetic Regulator of Autism-Risk Genes and Cognition [Bisulfite-Seq] |
| GSE128712 |
The dual role of mast cells in sporadic colorectal tumorigenesis: clinical and experimental evidence |
| GSE128829 |
Methyl-CpG binding domain 2 (Mbd2) is an Epigenetic Regulator of Autism-Risk Genes and Cognition |
| GSE129470 |
A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and Tet activity |
| GSE129528 |
Topoisomerase II-induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity [HTGTS] |
| GSE129529 |
Topoisomerase II-induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity |
| GSE129734 |
Exonuclease Requirements for Mammalian Ribosomal RNA Biogenesis and Surveillance |
| GSE129850 |
CtIP is essential for early B cell proliferation and development in mice |
| GSE129895 |
Phosphorylation at the S2056 1 cluster of DNA-PKcs is dispensable for lymphocyte development and class switch recombination in mice. |
| GSE129896 |
Small RNA sequencing of mouse muscle and heart samples after small hairpin RNA delivery |
| GSE130214 |
The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination [3C-HTGTS] |
| GSE130216 |
The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination [HTGTS V(D)J-seq] |
| GSE130224 |
The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination |
| GSE130229 |
EZHIP constrains Polycomb Repressive Complex 2 activity in germ cells (RNA-Seq) |
| GSE130231 |
EZHIP constrains Polycomb Repressive Complex 2 activity in germ cells |
| GSE130263 |
Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [3C-HTGTS] |
| GSE130265 |
Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [CSR-HTGTS-Seq] |
| GSE130270 |
Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching |
| GSE130388 |
NFIA differentially controls adipogenic and myogenic gene program through distinct pathways to ensure adipocyte differentiation [chromatin] |
| GSE130390 |
NFIA differentially controls adipogenic and myogenic gene program through distinct pathways to ensure adipocyte differentiation |
| GSE130621 |
Mapping of microhomologies at CRISPR/Cas9 deletions |
| GSE130784 |
Ultra-High Throughput Single Cell Analysis of Proteins and RNAs by Split-pool Synthesis |
| GSE131154 |
Fidelity of translation initiation is required for coordinated respiratory complex assembly |
| GSE131272 |
Stereotyped transcriptomic transformation of somatosensory neurons in response to injury |
| GSE131285 |
Functional characterization of the Differences Between Parotid and Submandibular Salivary Glands |
| GSE131608 |
H3K36 methyltransferase SETD2 regulates lymphoid and neural development [MIXCR] |
| GSE131690 |
H3K36 methyltransferase SETD2 regulates NHEJ during lymphoid and neural development |
| GSE131941 |
Myc is required for adaptive beta cell replication in young mice but is not sufficient in one year old mice fed with a high fat |
| GSE132020 |
NSUN2 introduces 5-methylcytosines in mammalian mitochondrial tRNAs |
| GSE133756 |
Targeted RNA-sequencing Facilitates Quantitative Analysis of RB and E2F3 in mouse Sertoli cells |
| GSE134020 |
Mammalian RNA decay pathways are highly specialized and widely linked to translation |
| GSE134191 |
Gene expression profiling of tumor-infiltrating CD45+CD8+ cells and CD45- tumor cells of tumor bearing mice treated with metformin or anti-PD-1 Ab or both |
| GSE134303 |
The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3 |
| GSE134749 |
Genome-wide CUT&RUN sequencing of H3K27me3 mark across different stages of T-cell development. |
| GSE134883 |
The Position Beta57 of IAg7 Controls the Early Anti-Insulin Response and Onset of Diabetes in NOD mice to Link MHC and Disease [sequencing] |
| GSE134885 |
The Position Beta57 of IAg7 Controls the Early Anti-Insulin Response and Onset of Diabetes in NOD mice to Link MHC and Disease |
| GSE135208 |
Tamoxifen induction of Cre recombinase does not cause long lasting or sexually divergent responses in the CNS epigenome or transcriptome: implications for the design of aging studies. |
| GSE135397 |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation [RNA-Seq] |
| GSE135451 |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation |
| GSE135528 |
Annexin A3 is necessary for artery-vein alignment in the mouse retinas (RNA-seq analysis of isolated retinal endothelial cells from Anxa3;Tie2-cre mutant mice) |
| GSE135597 |
miRNA Analysis of lungs of LCPUFA-treated asthmatic C57BL/6 mice and respective controls |
| GSE135761 |
Germline-Encoded Affinity for Cognate Antigen Enables Vaccine Amplification of a Human Broadly Neutralizing Response Against Influenza Virus |
| GSE135837 |
Estrogen receptor β regulates skeletal muscle mass and muscle stem cell proliferation in young female mice |
| GSE135841 |
Epigenetic priming by Dppa2/4 in pluripotency facilitates multi-lineage commitment |
| GSE136149 |
Circulating miR 802-5p and miR 194-5p and brain expression of MEF2C as novel biomarkers of breast cancer brain metastasis |
| GSE136317 |
Identification of Ankrd35 as a mediator of cisplatin response in non-small cell lung cancer by in vivo screening of murine tumor derived xenografts |
| GSE136346 |
Identification of Ankrd35 as a mediator of cisplatin response in non-small cell lung cancer by ex vivo 3D screening of primary tumor spheroids |
| GSE136393 |
Retroelement insertion in a CRISPR/Cas9 editing site in the early embryo intensifies genetic mosaicism |
| GSE136650 |
Induction of autoreactive regulatory T cells through promiscuous gene expression by bone marrow-resident Aire+ antigen-presenting cells |
| GSE136695 |
Altered Biogenesis and MicroRNA Content of Hippocampal Exosomes Following Experimental Status Epilepticus |
| GSE136875 |
Assessment of the stabilty of Treg cell subsets in the bone marrow [targeted Bisulfite-seq] |
| GSE137098 |
Embryonic stem cell-derived neurons as a model system for epigenome maturation during development |
| GSE138135 |
Igk locus capture-based target enrichment sequencing |
| GSE138136 |
High-throughput capture of cis-rearrangement and trans-rearrangement sequence [LAM-HTGTS] |
| GSE138137 |
High-throughput sequencing of RAG induced re-arrangements |
| GSE139225 |
RNAseq on Dengue specific mice immunoglobulin repertoires |
| GSE139499 |
Influenza A virus-infection differentially affects conventional and regulatory T cell repertoire |
| GSE139677 |
Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq II] |
| GSE139984 |
Strand-specific single-cell methylomics reveals distinct modes of DNA demethylation dynamics in preimplantation mouse and human embryos |
| GSE140085 |
Loss of TET2 results in gene expression represssion in mouse naïve B-cells and lymphoma cells [DNA-Seq] |
| GSE140086 |
Loss of TET2 results in gene expression represssion in mouse naïve B-cells and lymphoma cells |
| GSE140094 |
AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) [Thymus] |
| GSE140096 |
AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) [liver] |
| GSE140097 |
AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) [kidney] |
| GSE140105 |
AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) |
| GSE140313 |
Trib1 promotes acute myeloid leukemia progression by modulating transcriptional programs of Hoxa9 [ChIP-seq] |
| GSE140315 |
Trib1 promotes acute myeloid leukemia progression by modulating transcriptional programs of Hoxa9 |
| GSE140672 |
Intra-Vk Cluster Recombination Shapes the Ig Kappa Locus Repertoire [HTGTS] |
| GSE140677 |
Intra-Vk Cluster Recombination Shapes the Ig Kappa Locus Repertoire |
| GSE140720 |
Immunization with two heterotypic influenza hemagglutinins by time difference effectively produces broadly binding antibodies against heterotypic influenza virus |
| GSE140795 |
Peyer’s Patch Germinal Centers Select Innate-like BCRs |
| GSE140859 |
Notch controls urothelial integrity in the mouse bladder. |
| GSE140975 |
Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus |
| GSE141917 |
Immunotherapy against amyloid beta is modulated by meningeal lymphatic function |
| GSE142289 |
Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture [HTGTS-Seq] |
| GSE142315 |
Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture |
| GSE142607 |
Metabolism in synovial macrophages are reprogrammed by synovial fibroblasts under inflammatory condition |
| GSE142677 |
AGO HITS-CLIP Reveals Distinct Patterns of miRNA Regulation of Visceral and Brown Adipose Tissue Identity |
| GSE142777 |
CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning [LAM-HTGTS] |
| GSE142778 |
CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning [3C-HTGTS] |
| GSE142781 |
CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning |
| GSE143266 |
An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis [ChIP-seq] |
| GSE143271 |
An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis |
| GSE143818 |
Estrogen receptor alpha signaling establishes a sexually dimorphic regulatory node of energy expenditure |
| GSE144524 |
High throughput screening identifies SOX2 as a Super Pioneer Factor that inhibits DNA methylation maintenance at its binding sites |
| GSE144716 |
Gene regulation by gonadal hormone receptors defines brain sex differences-[CUT&RUN] |
| GSE144718 |
Gene regulation by gonadal hormone receptors defines brain sex differences |
| GSE144898 |
PiggyBac (PB) genetic screening allows identification of putative metastatic genes |
| GSE145257 |
Identification of active gene regulatory elements in the human and murine TBX3 locus |
| GSE145266 |
p63 Maintains the Proliferative Potential of Salivary Gland Stem/Progenitor Cells by Regulating Follistatin, a Key Mediator of TGF-b/Activin Signaling [RNA-seq] |
| GSE145268 |
p63 Maintains the Proliferative Potential of Salivary Gland Stem/Progenitor Cells by Regulating Follistatin, a Key Mediator of TGF-b/Activin Signaling |
| GSE145273 |
Integrated single-cell analysis reveals coupled molecular gradient and functional subnetworks in the thalamic reticular nucleus |
| GSE145422 |
Peptidylarginine deiminase 4 promotes the renal infiltration of neutrophils and exacerbates the TLR7 agonist-induced lupus mice |
| GSE145922 |
IL-23 promotes a coordinated B-cell germinal center program for class-switch recombination to IgG2b in BXD2 mice |
| GSE146129 |
IMPLICON: a high-resolution method to uncover DNA methylation at imprinted regions |
| GSE146205 |
Yap RNAseq |
| GSE146680 |
Gasdermin-D-dependent IL-1 alpha release from microglia promotes protective immunity during chronic Toxoplasma gondii infection |
| GSE146786 |
Mast cells elicit protection against colorectal tumors by modulating the immune response during early tumorigenic steps |
| GSE146972 |
An engineered CRISPR/Cas9 mouse line for simultaneous readout of lineage histories and gene expression profiles in single cells |
| GSE146998 |
Indel rate analysis:Start codon disruption with CRISPR/Cas9 prevents murine Fuchs' endothelial corneal dystrophy |
| GSE146999 |
Start codon disruption with CRISPR/Cas9 prevents murine Fuchs' endothelial corneal dystrophy |
| GSE147243 |
Macrophage-derived extracellular vesicles regulate concanavalin A-induced hepatitis by suppressing macrophage cytokine production. |
| GSE147359 |
Thymic B cells promote germinal center-like structures and the expansion of follicular helper T cells in lupus-prone mice |
| GSE147563 |
A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals [RNA-Seq] |
| GSE147568 |
A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals |
| GSE147607 |
Loss of Tdp-43 disrupts the axonal transcriptome of motoneurons accompanied by impaired axonal translation and mitochondria function |
| GSE147660 |
PolyA-miner: Accurate assessment of differential Alternative Poly-Adenylation from 3’Seq data using Vector projections and Non-negative matrix factorization [mouse] |
| GSE147661 |
PolyA-miner: Accurate assessment of differential Alternative Poly-Adenylation from 3’Seq data using Vector projections and Non-negative matrix factorization |
| GSE147787 |
BCL11A promotes myeloid leukemogenesis by abrogating the transcriptional activity of PU.1 [ChIP-seq] |
| GSE147798 |
BCL11A promotes myeloid leukemogenesis by abrogating the transcriptional activity of PU.1 |
| GSE147828 |
miRNA profiling of mouse motor neuron during development |
| GSE148067 |
Systematic analysis of imprinting defects in female and male mouse iPSCs |
| GSE148686 |
A mechanism for microRNA arm switching regulated by uridylation [AQ-seq] |
| GSE148687 |
A mechanism for microRNA arm switching regulated by uridylation |
| GSE149074 |
Stress dynamically regulates co-expression networks of glucocorticoid receptor-dependent MDD and SCZ risk genes. |
| GSE149076 |
Cell-type specific gene expression profiling in heterogeneous in vitro cultures using epitope-tagged RPL22 |
| GSE150295 |
Identification of PAX6 target genes in enteric precursor cells |
| GSE150423 |
Lsh/HELLS is required for B lymphocyte development and immunoglobulin class switch recombination |
| GSE150644 |
The stem cell pluripotency genes Klf4 and Oct4 regulate complex SMC phenotypic changes critical in late-stage atherosclerotic lesion pathogenesis |
| GSE150813 |
Gene expression profiling of CD244+CXCR6+ C2 iNKT cell subet and CD244-CXCR6+ C1 iNKT cell subset |
| GSE151074 |
Genome stabilization by RAD51 stimulatory compound-1 enhances efficiency of somatic cell nuclear transfer-mediated reprogramming and full-term development of cloned mouse embryos |
| GSE151504 |
E proteins orchestrate dynamic transcriptional cascades implicated in the suppression of the differentiation of group 2 innate lymphoid cells [RNA-Seq] |
| GSE151709 |
Single-cell RNA sequencing of olfactory bulb dopaminergic neurons |
| GSE151739 |
E proteins orchestrate dynamic transcriptional cascades implicated in the suppression of the differentiation of group 2 innate lymphoid cells |
| GSE151747 |
eiCLIP analysis of RBFOX2 in primary mouse hepatocytes |
| GSE151753 |
Characterization of the role of RBFOX2 in the liver |
| GSE152156 |
Role of the metabolic sensor AMP-activated protein kinase in T cell function in vivo [TCR-seq] |
| GSE152157 |
Role of the metabolic sensor AMP-activated protein kinase in T cell function in vivo |
| GSE152174 |
Active turnover of genomic methylcytosine in pluripotent cells |
| GSE152483 |
RNP-MaP: In-cell analysis of protein interaction networks defines functional hubs in RNA |
| GSE152726 |
Targeted genomic sequencing of the TCRγ locus in ILC2s and γδT cells |
| GSE152756 |
Identification of the target genes of androgen in skeletal muscle using myofiber specific ARKO female mice |
| GSE152888 |
Targeted single cell RNA sequencing of T cells infiltrated in mouse gastric cancer. |
| GSE153118 |
Experimental Autoimmune Encephalomyelitis is Associated with Changes of the Microbiota Composition in the Gastrointestinal Tract |
| GSE153147 |
Effects of novel selective androgen receptor modulator, TEI-SARM2, on gene expression profile changes in skeletal muscle |
| GSE153424 |
Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics |
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