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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Oct 16, 2012 |
| Title |
Illumina MiSeq (Schizosaccharomyces pombe) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Schizosaccharomyces pombe |
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| Submission date |
Oct 16, 2012 |
| Last update date |
May 27, 2014 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (529)
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GSM1020600, GSM1020601, GSM1374060, GSM1374061, GSM1399426, GSM1399427
GSM1486228, GSM1486229, GSM1486230, GSM1486231, GSM1541721, GSM1541722, GSM1591762, GSM1591763, GSM1591770, GSM1591771, GSM1591772, GSM1591773, GSM1591774, GSM1591775, GSM1591776, GSM1621334, GSM1621335, GSM1621336, GSM1621337, GSM1621338, GSM1634688, GSM1634689, GSM1634690, GSM1634691, GSM1634692, GSM1634693, GSM1634694, GSM1634695, GSM1634696, GSM1634697, GSM1638845, GSM1654366, GSM1654367, GSM1887731, GSM1887732, GSM1887733, GSM1887734, GSM1919941, GSM1919942, GSM1919943, GSM1919944, GSM1919945, GSM1919946, GSM1919947, GSM1919948, GSM1919949, GSM1919950, GSM1919951, GSM1919952, GSM1919953, GSM1919954, GSM1919955, GSM1919956, GSM1919957, GSM1931602, GSM1931603, GSM1974426, GSM1974431, GSM1974434, GSM1974436, GSM1974439, GSM2043050, GSM2043051, GSM2043052, GSM2043053, GSM2424383, GSM2424384, GSM2424385, GSM2424386, GSM2424387, GSM2424388, GSM2445932, GSM2445933, GSM2445934, GSM2445935, GSM2445936, GSM2445937, GSM2479681, GSM2479682, GSM2479683, GSM2479684, GSM2479685, GSM2479686, GSM2479687, GSM2479688, GSM2483550, GSM2483551, GSM2483552, GSM2483553, GSM2483554, GSM2483555, GSM2483556, GSM2483557, GSM2576831, GSM2576832, GSM2576833, GSM2576834, GSM2576835, GSM2576836, GSM2576837, GSM2576838, GSM2576839, GSM2576840, GSM2576841, GSM2576842, GSM2576843, GSM2576844, GSM2576845, GSM2576846, GSM2576847, GSM2803074, GSM2803075, GSM2803076, GSM2803077, GSM2803078, GSM2803079, GSM2803080, GSM2803081, GSM2803082, GSM2803083, GSM2803084, GSM2803085, GSM2803086, GSM2995514, GSM2995515, GSM2995516, GSM3058082, GSM3058083, GSM3058084, GSM3130529, GSM3130530, GSM3895480, GSM3895481, GSM3895482, GSM3895490, GSM3895491, GSM3895492, GSM3895493, GSM3895494, GSM3990104, GSM3990105, GSM3990106, GSM3990107, GSM3990108, GSM3990109, GSM3990110, GSM3990111, GSM4194478, GSM4194479, GSM4194480, GSM4194481, GSM4194482, GSM4230318, GSM4230319, GSM4230320, GSM5091278, GSM5091279, GSM5091280, GSM5091281, GSM5091282, GSM5091283, GSM5091284, GSM5091285, GSM5091286, GSM5091287, GSM5091292, GSM5091293, GSM5091294, GSM5091295, GSM5091296, GSM5091297, GSM5091298, GSM5091299, GSM6067819, GSM6067820, GSM6067821, GSM6067822, GSM6409915, GSM6409917, GSM6409918, GSM6409919, GSM6409920, GSM6409921, GSM6409922, GSM6409924, GSM6409925, GSM6409926, GSM6409927, GSM6409928, GSM6409929, GSM6409931, GSM6409932, GSM6409933, GSM6409934, GSM6409935, GSM6409936, GSM6409937, GSM6409939, GSM6409940, GSM6409941, GSM6409942, GSM6409943, GSM6409944, GSM6409945, GSM6409947, GSM6409948, GSM6409949, GSM6409950, GSM6409951, GSM6409952, GSM6409954, GSM6409955, GSM6409956, GSM6409957, GSM6409958, GSM6409959, GSM6409961, GSM6409962, GSM6409963, GSM6409964, GSM6409965, GSM6409966, GSM6409968, GSM6409969, GSM6409970, GSM6409971, GSM6409972, GSM6409973, GSM6409975, GSM6409976, GSM6409977, GSM6409978, GSM6409979, GSM6409980, GSM6409981, GSM6409983, GSM6409984, GSM6409985, GSM6409986, GSM6409987, GSM6409988, GSM6409990, GSM6409991, GSM6409992, GSM6409993, GSM6409994, GSM6409995, GSM6409996, GSM6409998, GSM6409999, GSM6410000, GSM6410001, GSM6410002, GSM6429720, GSM6429721, GSM6429722, GSM6429723, GSM6429724, GSM6429725, GSM6429726, GSM6429727, GSM6429728, GSM6429729, GSM6429730, GSM6429731, GSM6697777, GSM6697778, GSM6697779, GSM6697780, GSM6697781, GSM6697782, GSM6697783, GSM6697784, GSM6697785, GSM6697786, GSM6697787, GSM6697788, GSM6697789, GSM6697790, GSM6697791, GSM6697792, GSM6697793, GSM6697794, GSM6697795, GSM6697796, GSM6697797, GSM6697798, GSM7299706, GSM7299707, GSM7299708, GSM7299709, GSM7759731, GSM7759732, GSM7759733, GSM7759734, GSM7759735, GSM7759743, GSM7759744, GSM7759745, GSM7759746, GSM7759747, GSM7759748, GSM7759749, GSM7759750, GSM7759751, GSM7759752, GSM7759753, GSM7759754, GSM7759755, GSM7759756, GSM7759757, GSM7759758, GSM7777752, GSM7777753, GSM7777754, GSM7777755, GSM7777756, GSM7777757, GSM7911017, GSM7911018, GSM7911019, GSM7911020, GSM7911021, GSM7911022, GSM7911023, GSM7911024, GSM7911025, GSM7911026, GSM7911027, GSM7911028, GSM7911029, GSM7911030, GSM8306074, GSM8306075, GSM8306076, GSM8306077, GSM8306078, GSM8306079, GSM8306080, GSM8306082, GSM8306083, GSM8306084, GSM8306085, GSM8306087, GSM8306088, GSM8306089, GSM8306090, GSM8306091, GSM8306092, GSM8306093, GSM8306094, GSM8306095, GSM8306096, GSM8306097, GSM8306098, GSM8306099, GSM8306100, GSM8306101, GSM8306102, GSM8306103, GSM8306104, GSM8306105, GSM8306106, GSM8306107, GSM8306108, GSM8306109, GSM8306110, GSM8306111, GSM8306112, GSM8306113, GSM8306114, GSM8306115, GSM8306116, GSM8306117, GSM8306118, GSM8309485, GSM8309486, GSM8309487, GSM8309488, GSM8309489, GSM8309490, GSM8309491, GSM8309492, GSM8309493, GSM8309494, GSM8309495, GSM8309496, GSM8309497, GSM8309498, GSM8309499, GSM8309500, GSM8309501, GSM8309502, GSM8309503, GSM8309504, GSM8309525, GSM8309526, GSM8309527, GSM8309528, GSM8309529, GSM8322650, GSM8322651, GSM8322652, GSM8322653, GSM8322654, GSM8322655, GSM8322656, GSM8322657, GSM8322658, GSM8322659, GSM8322660, GSM8322661, GSM8322662, GSM8322663, GSM8322664, GSM8322665, GSM8322666, GSM8322667, GSM8322668, GSM8322669, GSM8322670, GSM8322671, GSM8322672, GSM8322673, GSM8574671, GSM8574672, GSM8574673, GSM8574674, GSM8574675, GSM8574676, GSM8574677, GSM8574678, GSM8574679, GSM8596611, GSM8596612, GSM8602854, GSM8602855, GSM8602856, GSM8602857, GSM8602858, GSM8602859, GSM8602860, GSM8602861, GSM8602862, GSM8602863, GSM8602864, GSM8602865, GSM8602866, GSM8602867, GSM8602868, GSM8602869, GSM8602870, GSM8602871, GSM8602872, GSM8602873, GSM8602874, GSM8602875, GSM8602876, GSM8602879, GSM8602880, GSM8602881, GSM8602882, GSM8602883, GSM8602884, GSM8602885, GSM8602886, GSM8602887, GSM8602888, GSM8602889, GSM8602890, GSM8602891, GSM8602892, GSM8602893, GSM8602894, GSM8602895, GSM8602896, GSM8602897, GSM8602901, GSM8602902, GSM8602903, GSM8602904, GSM8602905, GSM8602906, GSM8602907, GSM8602908, GSM8602909, GSM8602910, GSM8602911, GSM8602912, GSM8602913, GSM8602914, GSM8602915, GSM8602916, GSM8602917...
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| Series (63)
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| GSE41634 |
RNAi triggered by specialized machinery silences developmental genes and retrotransposons (RNA-Seq) |
| GSE41643 |
RNAi triggered by specialized machinery silences developmental genes and retrotransposons |
| GSE57067 |
Role of Fun30 remodelers in retrotransposon regulation [MNase-Seq] |
| GSE57069 |
Role of Fun30 remodelers in retrotransposon regulation |
| GSE58012 |
Role of Fft3 in nuclear organization [MNase-seq] |
| GSE58013 |
Role of Fft3 in nuclear organization |
| GSE60712 |
A new transcription factor for mitosis: In S. pombe, the RFX transcription factor Sak1 works with forkhead factors to regulate mitotic expression (ChIP-Seq) |
| GSE60719 |
A new transcription factor for mitosis: In S. pombe, the RFX transcription factor Sak1 works with forkhead factors to regulate mitotic expression |
| GSE63120 |
Widespread Co-translational RNA Decay Reveals Ribosome Dynamics |
| GSE65293 |
Rif1 binds to G-quadruplexes and suppresses replication over a long distances |
| GSE66386 |
High-resolution nucleosome positioning from ATAC-seq chromatin accessibility data |
| GSE66940 |
Paf1 complex factors, Leo1 and Paf1, promote local histone turnover to modulate chromatin states in fission yeast [ncRNA-Seq] |
| GSE66941 |
Paf1 complex factors, Leo1 and Paf1, promote local histone turnover to modulate chromatin states in fission yeast |
| GSE67105 |
A novel phosphate-starvation response in fission yeast requires the endocytic function of Myosin I (ChIP-seq) |
| GSE67126 |
A new phosphate-starvation response in fission yeast requires the endocytic function of myosin I |
| GSE67692 |
Arrested replication forks guide retrotransposon integration |
| GSE73144 |
Regulation of mRNA Levels by Suicidal Introns that Induce Nuclear Decay |
| GSE74411 |
RNA accumulation profiles generated by RNA-Seq in mutants of Schizosaccharomyces pombe exosome exonucleases Rrp6 and Dis3 |
| GSE74739 |
A conserved factor Dhp1/Rat1/Xrn2 triggers premature transcription termination and nucleates heterochromatin to promote gene silencing [sRNA-seq] |
| GSE74741 |
A conserved factor Dhp1/Rat1/Xrn2 triggers premature transcription termination and nucleates heterochromatin to promote gene silencing |
| GSE76112 |
Expression profiling of fission yeast strains: wild-type, erh1∆, and ccr4∆ |
| GSE76114 |
Expression profiling and ChIP-chip of Schizosaccharomyces pombe strains wildtype, erh1∆, and ccr4∆ |
| GSE77047 |
Untimely expression of gametogenic genes in vegetative cells causes uniparental disomy (RNA-seq) |
| GSE77050 |
Untimely expression of gametogenic genes in vegetative cells causes uniparental disomy |
| GSE92246 |
An Estradiol-Inducible Promoter Enables Fast, Graduated Control of Gene Expression in Fission Yeast |
| GSE93178 |
Checkpoint-independent Regulation of Origin Firing by Mrc1 through Interaction with Hsk1 kinase |
| GSE94627 |
A phylogenetic framework to study the evolution of transcriptional regulatory networks [RNA-Seq] |
| GSE94628 |
A phylogenetic framework to study the evolution of transcriptional regulatory networks |
| GSE94812 |
Genome-wide replication timing in the mutants deleted for telomere-binding proteins in S. pombe |
| GSE97748 |
The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly [small RNA] |
| GSE97749 |
The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly |
| GSE104546 |
Expression profilings of fission yeast strains (RNA-seq data set) |
| GSE104547 |
The fission yeast Schizosaccharomyces pombe |
| GSE110546 |
Expression profilings of fission yeast strains (NETSEQ data set) |
| GSE112117 |
Novel RNA partners of the Mei2 RNA binding protein during early meiosis in Schizosaccharomyces pombe |
| GSE123137 |
CPF is required for heterochromatin assembly and gene silencing [ChIP-seq] |
| GSE123144 |
CPF is required for heterochromatin assembly and gene silencing |
| GSE132865 |
Nuclear peripheral positioning of heterochromatin by Amo1NUPL2 suppresses nucleosome turnover to promote epigenetic inheritance |
| GSE135159 |
Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression [RNA-Seq] |
| GSE135160 |
Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression [smRNA-seq] |
| GSE135161 |
Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression |
| GSE141070 |
Nuclear peripheral positioning of heterochromatin by Amo1NUPL2 suppresses nucleosome turnover to promote epigenetic inheritance [ChIP-seq] |
| GSE142487 |
TOR targets RNA elimination machinery to govern facultative heterochromatin assembly and mitosis to meiosis developmental switch [RNA-seq] |
| GSE142488 |
TOR targets an RNA processing network to regulate facultative heterochromatin, developmental gene expression and cell proliferation |
| GSE156069 |
Clr4SUV39H1 ubiquitination and non-coding RNA mediate transcriptional silencing via heterochromatic phase transitions |
| GSE167040 |
Cotranscriptional RNA cleavage by Drosha homolog Pac1 triggers transcription termination in fission yeast. [ChIP-Seq] |
| GSE167041 |
Cotranscriptional RNA cleavage by Drosha homolog Pac1 triggers transcription termination in fission yeast. [RNA-Seq] |
| GSE167065 |
Cotranscriptional RNA cleavage by Drosha homolog Pac1 triggers transcription termination in fission yeast. |
| GSE201580 |
Fission Yeast TORC1 Promotes Cell Proliferation through Sfp1, a Transcription Factor Involved in Ribosome Biogenesis |
| GSE210404 |
Identification of queuosine-modified RNAs in S. pombe using metabolic labelling with preQ1-L1 (Q-RIP-Seq) |
| GSE216921 |
Detection of Q-modification in RNAs from S. pombe and S. flexneri via reverse transcription using RT-KTq I614Y (Q-MaP-Seq) |
| GSE231729 |
CENP-A chaperone Scm3HJURP contains a cysteine-rich domain required for centromere targeting and kinetochore integrity |
| GSE235806 |
Mapping the dynamics of epigenetic adaptation during heterochromatin misregulation [ChIP-seq] |
| GSE235808 |
Mapping the dynamics of epigenetic adaptation during heterochromatin misregulation |
| GSE242353 |
Specialized replication of heterochromatin domains ensures self-templated chromatin assembly and epigenetic inheritance [ChIP-seq] |
| GSE242431 |
Specialized replication of heterochromatin domains ensures self-templated chromatin assembly and epigenetic inheritance |
| GSE243035 |
Ageing-associated long non-coding RNA extends lifespan and reduces translation in non-dividing cells [aal1_ChIRP-RNAseq] |
| GSE243036 |
Ageing-associated long non-coding RNA extends lifespan and reduces translation in non-dividing cells |
| GSE269092 |
PhpNF-Y drives heterochromatic transcription to generate splicing machinery-dependent small RNAs (ChIP-Seq) |
| GSE269096 |
Php|NF-Y transcription factor infiltrates repressive heterochromatin to generate transcripts crucial for spliceosome-dependent small RNA production |
| GSE269243 |
Nucleosome remodeler exclusion by histone deacetylation enforces heterochromatic silencing and epigenetic inheritance |
| GSE279522 |
PhpCNF-Y transcription factor infiltrates heterochromatin to generate cryptic intron-containing transcripts crucial for small RNA production [ChIP-Seq] |
| GSE280646 |
Stress controls heterochromatin inheritance through histone H3 ubiquitylation [ChIP-Seq] |
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| Supplementary data files not provided |
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