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Status
Public on Jan 20, 2012
Title
NimbleGen S.cerevisiae CGH HX12 Array [090615_Scer_OA_CGH]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Saccharomyces cerevisiae Manufacturer
NimbleGen
Manufacture protocol
see manufacturer's website
Description
S. cerevisiae (release r.64). r64 dated Feb-3-2011 at SGD, dated April 2011 at NCBI.
Submission date
Nov 15, 2011
Last update date
Jan 20, 2012
Contact name
Simon Robert Vincent Knott
E-mail(s)
sknott@cshl.edu Organization name
Cold Spring Harbor Laboratory
Lab
Hannon
Street address
1 Bungtown Rd
City
Cold Spring Harbor
State/province
NY
ZIP/Postal code
11724
Country
USA
Samples (102)
GSM833116 , GSM833117 , GSM833118 , GSM833119 , GSM833120 , GSM833121
GSM833122 ,
GSM833123 ,
GSM833124 ,
GSM833125 ,
GSM833126 ,
GSM833127 ,
GSM833128 ,
GSM833129 ,
GSM833130 ,
GSM833131 ,
GSM833132 ,
GSM833133 ,
GSM833134 ,
GSM833135 ,
GSM833136 ,
GSM833137 ,
GSM833138 ,
GSM833139 ,
GSM833140 ,
GSM833141 ,
GSM833142 ,
GSM833143 ,
GSM833144 ,
GSM833145 ,
GSM1267370 ,
GSM1267371 ,
GSM1267372 ,
GSM1267373 ,
GSM1267374 ,
GSM1267375 ,
GSM1267376 ,
GSM1267377 ,
GSM1267378 ,
GSM1267379 ,
GSM1267380 ,
GSM1267381 ,
GSM1267382 ,
GSM1267383 ,
GSM1267384 ,
GSM1267385 ,
GSM1267386 ,
GSM1267387 ,
GSM1267388 ,
GSM1267389 ,
GSM1267390 ,
GSM1267391 ,
GSM1267392 ,
GSM1267393 ,
GSM1267394 ,
GSM1267395 ,
GSM1267396 ,
GSM1267397 ,
GSM1267398 ,
GSM1267399 ,
GSM1329903 ,
GSM1329904 ,
GSM1329905 ,
GSM1329906 ,
GSM1329907 ,
GSM1329908 ,
GSM1329909 ,
GSM1329910 ,
GSM1329911 ,
GSM1329912 ,
GSM1329913 ,
GSM1329914 ,
GSM1329915 ,
GSM1329916 ,
GSM1329917 ,
GSM1329918 ,
GSM1329919 ,
GSM1329920 ,
GSM1377449 ,
GSM1377450 ,
GSM1377451 ,
GSM1377452 ,
GSM1377453 ,
GSM1377454 ,
GSM1377455 ,
GSM1377456 ,
GSM1377457 ,
GSM1377458 ,
GSM1377459 ,
GSM1377460 ,
GSM1826219 ,
GSM1826220 ,
GSM1826221 ,
GSM1826222 ,
GSM1826223 ,
GSM1826224 ,
GSM2453781 ,
GSM2453782 ,
GSM2453783 ,
GSM2453784 ,
GSM2453785 ,
GSM2453786 Series (9)
GSE33702 Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae [Array Data]
GSE33704 Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae
GSE52467 Fkh1 and Fkh2 Bind Multiple Chromosomal Elements in the S. cerevisiae Genome with Distinct Specificities and Cell Cycle Dynamics
GSE55130 Rif1 regulates initiation timing of late replication origins throughout the S. cerevisiae genome [array]
GSE55156 Rif1 regulates initiation timing of late replication origins throughout the S. cerevisiae genome
GSE71051 Quantitative BrdU immunoprecipitation method demonstrates that Fkh1 and Fkh2 are rate-limiting activators of replication origins that reprogram replication timing in G1 phase (ChIP)
GSE71052 Quantitative BrdU immunoprecipitation method demonstrates that Fkh1 and Fkh2 are rate-limiting activators of replication origins that reprogram replication timing in G1 phase
GSE93518 Conserved forkhead dimerization motif controls DNA replication timing and spatial organization of chromosomes in S. cerevisiae (ChIP-chip)
GSE94796 Conserved forkhead dimerization motif controls DNA replication timing and spatial organization of chromosomes in S. cerevisiae
Data table header descriptions ID SEQUENCE Sequence of oligo
CHROMOSOME Chromosomal location
RANGE_GB Chromosome Accession.version
SPOT_ID RANGE_START Chromosomal start position of oligo
LENGTH Oligo length
RANGE_END Chromosomal end position of oligo
Data table ID SEQUENCE CHROMOSOME RANGE_GB SPOT_ID RANGE_START LENGTH RANGE_END CHR10FS000019525
ATGATTTATCCACTACCGAGTCTAACTCTAACTCAGTAGCAAATGCACCATCTGTAAAAA
chr10
NC_001142.9 19525
60
19584
CHR10FS000019593
AATGACTCTAAAAACTCCCTCAACCTGGATGCCACTGAACCACCTATTGA
chr10
NC_001142.9 19593
50
19642
CHR10FS000020045
TTCCCCAATGTTGATATCTGAAGTTGCTCCCAAACAAATCAGAGGAACCCT
chr10
NC_001142.9 20045
51
20095
CHR10FS000020301
AAACGTTCACTTTCGAAATCCAACAAAGTCTCAGTCGACGATCCAGCCTT
chr10
NC_001142.9 20301
50
20350
CHR10FS000020367
ACTATAAAGGCGGGAATCGAACTTGAAAAGCTGGCAGGTAACGCATCATG
chr10
NC_001142.9 20367
50
20416
CHR10FS000021091
CATGGAAATCAGCCTCATGGGTGCCACCAGAAAGAAGAACCGCAGATTAC
chr10
NC_001142.9 21091
50
21140
CHR10FS000021161
TGACGATAGACCAATCTACAAGAGGTTCTTTTCCAGCTAATCTTCCGGTTTTTAG
chr10
NC_001142.9 21161
55
21215
CHR10FS000021269
TTTTACGCCTTAATCCTTAACGGACTATTTGTTATGCCTTATAGAACTAGAAA
chr10
NC_001142.9 21269
53
21321
CHR10FS000021331
AAACATGAGCTACACGAGTTGACAGGGTGAACAGATTACTATAGCATCTTTCTCTCATGAATAA
chr10
NC_001142.9 21331
64
21394
CHR10FS000021431
GTGGAGTGAAATTCCATTCAAGAAACCAAGCATTGAGACAGAACAGTACAGAGTTCA
chr10
NC_001142.9 21431
57
21487
CHR10FS000021521
CCAGAAACATTCATATGACGTCTGTTTCAAATTAAGCTTAGTAAAAGTACACATTTA
chr10
NC_001142.9 21521
57
21577
CHR10FS000021601
GGTGGCCTGATATCCTTATTTTCCTTCTGCCAATTGGGCAAGTTGGTACTAATATT
chr10
NC_001142.9 21601
56
21656
CHR10FS000021695
TTCTTAAATGTTCTCACAATCGGCCATAACGCTATTTCTCCGACGTAACCTC
chr10
NC_001142.9 21695
52
21746
CHR10FS000021779
AAAATTAAAGTTTTCAATGTGCCCAAAAAAATTCACAAATAGTACGCGCTCG
chr10
NC_001142.9 21779
52
21830
CHR10FS000021853
CCAGGCACTATTTAGCATTACTTCGAAAAGACGCAAGTATAAAGAGTGAGATCTCAC
chr10
NC_001142.9 21853
57
21909
CHR10FS000021951
TAAACAAGGCTTCTAGAGAAAAATGGGCGTATTAGAAAATATAGTACCTGGTGAGC
chr10
NC_001142.9 21951
56
22006
CHR10FS000022015
GCGAACTATGATCCAGATCTTTTGAAAATTAGAAAAGAGACTAAAATAAAATTGCAC
chr10
NC_001142.9 22015
57
22071
CHR10FS000022113
CCAGGTAATAAGAGAATTACTTGGTAGTTGCACTGATAACTTTATAATTGAACCGC
chr10
NC_001142.9 22113
56
22168
CHR10FS000022185
CGGAAGTAACATCTATATCGGAGACAACTTTTACGCCAATCACAATCTTGTTATATTG
chr10
NC_001142.9 22185
58
22242
CHR10FS000022285
CCTAATGTTGGTATTTATACGGCAGGTCATCCAATTGACGTGGAAAGACG
chr10
NC_001142.9 22285
50
22334
132776 14126 Kbytes .Supplementary file Size Download File type/resource GPL14887_090615_Scer_OA_CGH.ndf.gz
7.1 Mb
(ftp) (http) NDF
GPL14887_090615_Scer_OA_CGH.pos.gz
989.5 Kb
(ftp) (http) POS
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