GEO Accession viewer

Data table

Group

Entrez_gene

REFSEQ

GB_ACC

RNA_nucleotide_gi

Protein_accession.version

Gene_symbol

Description

Chromosome

Map_location

Genomic_Specific

Orientation

GO_id_function

GO_id_componen

GO_id_process

GO_term_function

GO_term_component

GO_term_process

Ensembl_gene

Ensembl_transcript

Ensembl_protein

Unigene_cluster

Uniprot_id

SEQUENCE

SPOT_ID

PH_hs_0000002

1089

NM_001817.2

71143131

NP_001808.2

CEACAM4

carcinoembryonic antigen-related cell adhesion molecule 4

19q13.2

GO:0005624,GO:0005887,GO:0016020

membrane fraction,integral to plasma membrane,membrane

ENSG00000105352

ENST00000456892,ENST00000472081,ENST00000221954

ENSP00000403837,ENSP00000221954

Hs.12

O75871

AACTATTCAAGCCTATTATTGGCACAAGGGGAAAACGGCAGAAGGGAGCCCTCTCATTGC

PH_hs_0000003

4049

NM_001159740.1

229092380

NP_001153212.1

LTA

lymphotoxin alpha (TNF superfamily, member 1)

6p21.3

GO:0005102,GO:0005125,GO:0005164,GO:0005515

GO:0005576,GO:0005615,GO:0016020

GO:0006917,GO:0006959,GO:0007165,GO:0007267,GO:0007584,GO:0032496,GO:0048147,GO:0048535

receptor binding,cytokine activity,tumor necrosis factor receptor binding,protein binding

extracellular region,extracellular space,membrane

induction of apoptosis,humoral immune response,signal transduction,cell-cell signaling,response to nutrient,response to lipopolysaccharide,negative regulation of fibroblast proliferation,lymph node development

ENSG00000226275,ENSG00000226979,ENSG00000238130,ENSG00000223919,ENSG00000173503,ENSG00000231408,ENSG00000230279

ENST00000473355,ENST00000412851,ENST00000464086,ENST00000426845,ENST00000464821,ENST00000441939,ENST00000487391,ENST00000432632,ENST00000490708,ENST00000383304,ENST00000476761,ENST00000383303,ENST00000461499,ENST00000454550,ENST00000479906,ENST00000436519,ENST00000468015,ENST00000448630,ENST00000466460,ENST00000456789,ENST00000471842,ENST00000418386,ENST00000489638,ENST00000454783,ENST00000498217,ENST00000383499,ENST00000481446,ENST00000400272

ENSP00000412555,ENSP00000402413,ENSP00000387924,ENSP00000416337,ENSP00000372793,ENSP00000372791,ENSP00000416509,ENSP00000395976,ENSP00000407133,ENSP00000395895,ENSP00000413450,ENSP00000403495,ENSP00000372991,ENSP00000383131

Hs.36

P01374,Q5STV3

GTGAGAGGGCATGCGCACAAGGCTGACCAAGAGAGAAAGAAGTAGGCATGAGGGATCACA

PH_hs_0000004

NM_000019.3

223890189

NP_000010.1

ACAT1

acetyl-CoA acetyltransferase 1

11q22.3-q23.1

Yes

GO:0003985,GO:0005515,GO:0008415,GO:0016740,GO:0046872

GO:0005739,GO:0005743,GO:0005759

GO:0008152

acetyl-CoA C-acetyltransferase activity,protein binding,acyltransferase activity,transferase activity,metal ion binding

mitochondrion,mitochondrial inner membrane,mitochondrial matrix

metabolic process

ENSG00000075239

ENST00000265838

ENSP00000265838

Hs.232375

P24752

CATGCTAATTCAGAAGCTGTAGACAACCTCTGCTATTTAAGGAGACAACCCTATGTGACC

PH_hs_0000005

5764

NM_002825.5

42476152

NP_002816.1

PTN

pleiotrophin

7q33-q34

GO:0004864,GO:0008083,GO:0008201

GO:0005576,GO:0005615,GO:0005783

GO:0007185,GO:0007399,GO:0007612,GO:0008284,GO:0030282,GO:0051781

phosphoprotein phosphatase inhibitor activity,growth factor activity,heparin binding

extracellular region,extracellular space,endoplasmic reticulum

transmembrane receptor protein tyrosine phosphatase signaling pathway,nervous system development,learning,positive regulation of cell proliferation,bone mineralization,positive regulation of cell division

ENSG00000105894

ENST00000393083,ENST00000348225

ENSP00000376798,ENSP00000341170

Hs.371249

P21246

GCTGGATTAAAAGATGTCACCTGTGGAACATAAAAAGGACATCAGCAAACAGGATCAGTT

PH_hs_0000006

5724

NM_000952.4

257900489

NP_000943.1

PTAFR

platelet-activating factor receptor

1p35-p34.3

Yes

GO:0001875,GO:0004872,GO:0004930,GO:0004992,GO:0005543

GO:0005886,GO:0005887,GO:0016020,GO:0016021

GO:0001816,GO:0006935,GO:0006954,GO:0006955,GO:0007165,GO:0007186,GO:0032496,GO:0032959,GO:0048015

lipopolysaccharide receptor activity,receptor activity,G-protein coupled receptor activity,platelet activating factor receptor activity,phospholipid binding

plasma membrane,integral to plasma membrane,membrane,integral to membrane

cytokine production,chemotaxis,inflammatory response,immune response,signal transduction,G-protein coupled receptor protein signaling pathway,response to lipopolysaccharide,inositol trisphosphate biosynthetic process,phosphoinositide-mediated signaling

ENSG00000169403

ENST00000373857

ENSP00000362965

Hs.433540

P25105

TAAACCACCTAGTTCTCCCCGATGGGGCATCGGTCTAAAGCTTTGGGGGAGTGGGCGCAG

PH_hs_0000007

5277

NM_020473.2

110224462

NP_065206.2

PIGA

phosphatidylinositol glycan anchor biosynthesis, class A

Xp22.1

GO:0005515,GO:0016757,GO:0017176

GO:0000506,GO:0005783,GO:0005789,GO:0016020,GO:0016021

GO:0006506,GO:0009058,GO:0009893,GO:0016254

protein binding,transferase activity, transferring glycosyl groups,phosphatidylinositol N-acetylglucosaminyltransferase activity

glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex,endoplasmic reticulum,endoplasmic reticulum membrane,membrane,integral to membrane

GPI anchor biosynthetic process,biosynthetic process,positive regulation of metabolic process,preassembly of GPI anchor in ER membrane

ENSG00000165195

ENST00000428964,ENST00000333590

ENSP00000416102,ENSP00000369820

Hs.137154

B3KUV7

GTCAGTTTGCACTGGTCGGTATATGGAAACACATTGCTCTACCCTGCTACTTAGTTGATT

PH_hs_0000008

5631

NM_002764.3

164663865

NP_002755.1

PRPS1

phosphoribosyl pyrophosphate synthetase 1

Xq21.32-q24

GO:0000166,GO:0000287,GO:0004749,GO:0004749,GO:0004749,GO:0005524,GO:0016301,GO:0016740,GO:0042803

GO:0005829

GO:0006144,GO:0006164,GO:0006221,GO:0007399,GO:0009116,GO:0009156,GO:0034418,GO:0044249,GO:0046101

nucleotide binding,magnesium ion binding,ribose phosphate diphosphokinase activity,ribose phosphate diphosphokinase activity,ribose phosphate diphosphokinase activity,ATP binding,kinase activity,transferase activity,protein homodimerization activity

cytosol

purine base metabolic process,purine nucleotide biosynthetic process,pyrimidine nucleotide biosynthetic process,nervous system development,nucleoside metabolic process,ribonucleoside monophosphate biosynthetic process,urate biosynthetic process,cellular biosynthetic process,hypoxanthine biosynthetic process

ENSG00000147224

ENST00000372428,ENST00000372435

ENSP00000361505,ENSP00000361512

Hs.56

P60891

TTTCTTTGTTGAGAACAACTAGCAACAAAGGCAACCCATGTGTGACCAGTTCTCCCCAAG

PH_hs_0000009

5782

NM_002835.3

196114950

NP_002826.3

PTPN12

protein tyrosine phosphatase, non-receptor type 12

7q11.23

GO:0004726,GO:0005515,GO:0016787,GO:0017124

GO:0005625,GO:0005737,GO:0005829

GO:0006470

non-membrane spanning protein tyrosine phosphatase activity,protein binding,hydrolase activity,SH3 domain binding

soluble fraction,cytoplasm,cytosol

protein amino acid dephosphorylation

ENSG00000127947

ENST00000407343,ENST00000435495,ENST00000248594

ENSP00000385079,ENSP00000397991,ENSP00000248594

Hs.61812

A4D1C5,Q05209

GGGAGCTAGAAGACACTTTAAGTTATACTGGAAAATTCAGGTGCCACTGAAAGCCAGATT

PH_hs_0000010

6390

NM_003000.2

115387093

NP_002991.2

SDHB

succinate dehydrogenase complex, subunit B, iron sulfur (Ip)

1p36.1-p35

GO:0005515,GO:0008177,GO:0009055,GO:0016491,GO:0046872,GO:0048039,GO:0051537,GO:0051538,GO:0051539

GO:0005739,GO:0005743,GO:0005743,GO:0005749,GO:0016020

GO:0006099,GO:0006105,GO:0006810,GO:0009060,GO:0022904

protein binding,succinate dehydrogenase (ubiquinone) activity,electron carrier activity,oxidoreductase activity,metal ion binding,ubiquinone binding,2 iron, 2 sulfur cluster binding,3 iron, 4 sulfur cluster binding,4 iron, 4 sulfur cluster binding

mitochondrion,mitochondrial inner membrane,mitochondrial inner membrane,mitochondrial respiratory chain complex II,membrane

tricarboxylic acid cycle,succinate metabolic process,transport,aerobic respiration,respiratory electron transport chain

ENSG00000117118

ENST00000463045,ENST00000475506,ENST00000491274,ENST00000375499

ENSP00000364649

Hs.465924

P21912

GGATTGACACCAACCTCAATAAGGTCTCAAAAATCTACCCTCTTCCACACATGTATGTGA

PH_hs_0000011

9173

NM_003856.2

27894327

NP_003847.2

IL1RL1

interleukin 1 receptor-like 1

2q12

GO:0002114,GO:0004896,GO:0004908,GO:0005057,GO:0005515

GO:0005576,GO:0005615,GO:0005886,GO:0009897,GO:0016021

GO:0006955,GO:0007165,GO:0043124,GO:0045087

interleukin-33 receptor activity,cytokine receptor activity,interleukin-1 receptor activity,receptor signaling protein activity,protein binding

extracellular region,extracellular space,plasma membrane,external side of plasma membrane,integral to membrane

immune response,signal transduction,negative regulation of I-kappaB kinase/NF-kappaB cascade,innate immune response

ENSG00000115602

ENST00000409584,ENST00000311734

ENSP00000386618,ENSP00000310371

Hs.66

Q01638

GCAGGGACATCATCTCTTCCATCTTTGGGTCCTTAGTGCAATACCTGGCAGCTAGCCAGT

PH_hs_0000012

3561

NM_000206.2

291045209

NP_000197.1

IL2RG

interleukin 2 receptor, gamma (severe combined immunodeficiency)

Xq13.1

GO:0004872,GO:0004911,GO:0004913,GO:0004917,GO:0005515,GO:0019976

GO:0005887,GO:0009897,GO:0016020

GO:0006955,GO:0007165,GO:0044419

receptor activity,interleukin-2 receptor activity,interleukin-4 receptor activity,interleukin-7 receptor activity,protein binding,interleukin-2 binding

integral to plasma membrane,external side of plasma membrane,membrane

immune response,signal transduction,interspecies interaction between organisms

ENSG00000147168

ENST00000374188,ENST00000374191,ENST00000512747,ENST00000374202,ENST00000276110

ENSP00000363303,ENSP00000363306,ENSP00000363318

Hs.84

P31785

GAAGAACCCCAGGGTCCTGTAGCCCTAAGTGGTACTAACTTTCCTTCATTCAACCCACCT

PH_hs_0000013

5933

NM_002895.2

34577078

NP_002886.2

RBL1

retinoblastoma-like 1 (p107)

20q11.2

GO:0005515,GO:0008134

GO:0005634,GO:0005667

GO:0000122,GO:0007049,GO:0016568,GO:0043550,GO:0044419,GO:0045449

protein binding,transcription factor binding

nucleus,transcription factor complex

negative regulation of transcription from RNA polymerase II promoter,cell cycle,chromatin modification,regulation of lipid kinase activity,interspecies interaction between organisms,regulation of transcription

ENSG00000080839

ENST00000373664

ENSP00000362768

Hs.207745

P28749

ACACTCATCCTTGCTTTCCAGCCCTAAGCCATCTCAGCCTGATGTCACAACCCAATAAAT

PH_hs_0000014

275

NM_001164710.1

257796253

NP_001158182.1

AMT

aminomethyltransferase

3p21.2-p21.1

GO:0004047,GO:0008483,GO:0016740

GO:0005737,GO:0005739

GO:0006546

aminomethyltransferase activity,transaminase activity,transferase activity

cytoplasm,mitochondrion

glycine catabolic process

ENSG00000145020

ENST00000454938,ENST00000458307,ENST00000273588,ENST00000476226,ENST00000427987,ENST00000465925

ENSP00000401743,ENSP00000415619,ENSP00000273588,ENSP00000403821

Hs.102

B4DJQ0

CCATGGTTTTTCACATTGCAAAGGGTAATAACATGGGCAGTGCGGACTTAGGCTACCCCC

PH_hs_0000015

3083

NM_001528.2

32455241

NP_001519.1

HGFAC

HGF activator

4p16

GO:0004252,GO:0005515,GO:0008233,GO:0008236

GO:0005576,GO:0005615

GO:0006508

serine-type endopeptidase activity,protein binding,peptidase activity,serine-type peptidase activity

extracellular region,extracellular space

proteolysis

ENSG00000109758

ENST00000506132,ENST00000509689,ENST00000511533,ENST00000382774

ENSP00000421801,ENSP00000372224

Hs.104

Q04756

GTGACGCAGACCTTCGGCATCGAGAAGTACATCCCGTACACCCTGTACTCGGTGTTCAAC

PH_hs_0000016

2267

NM_004467.3

42544188

NP_004458.3

FGL1

fibrinogen-like 1

8p22

Yes

GO:0005102

GO:0005576,GO:0005577

GO:0007165

receptor binding

extracellular region,fibrinogen complex

signal transduction

ENSG00000104760

ENST00000381841,ENST00000427924,ENST00000398054,ENST00000381840,ENST00000398056,ENST00000221204

ENSP00000371263,ENSP00000401952,ENSP00000381131,ENSP00000371262,ENSP00000381133,ENSP00000221204

Hs.491143

Q08830

GGTGTATACTACAGCGGCCCCTACACGGCTAAAACAGACAATGGGATTGTCTGGTACACC

PH_hs_0000017

1800

NM_004413.3

189458883

NP_004404.1

DPEP1

dipeptidase 1 (renal)

16q24.3

GO:0005515,GO:0008233,GO:0008235,GO:0008239,GO:0016805,GO:0046872

GO:0005886,GO:0016324,GO:0031225,GO:0031528,GO:0042995

GO:0006508

protein binding,peptidase activity,metalloexopeptidase activity,dipeptidyl-peptidase activity,dipeptidase activity,metal ion binding

plasma membrane,apical plasma membrane,anchored to membrane,microvillus membrane,cell projection

proteolysis

ENSG00000015413

ENST00000393092,ENST00000421184,ENST00000261615

ENSP00000376807,ENSP00000397313,ENSP00000261615

Hs.109

P16444

AGGACGTCTCCAAGTATCCAGACCTGATCGCTGAGCTGCTCAGGAGGAACTGGACGGAGG

PH_hs_0000018

9581

NM_006036.4

284172362

NP_006027.2

PREPL

prolyl endopeptidase-like

2p21

GO:0004252,GO:0008233

GO:0005737,GO:0005829

GO:0006508

serine-type endopeptidase activity,peptidase activity

cytoplasm,cytosol

proteolysis

ENSG00000138078

ENST00000409936,ENST00000409411,ENST00000409957

ENSP00000386543,ENSP00000387095,ENSP00000387241

Hs.444349

Q4J6C6

ATGAAAGCACATGTTTCAGTGCCACTCACATAAGAAGTGCCCGGTAAGTGTTAGCTATTA

PH_hs_0000019

2254

NM_002010.2

209529671

NP_002001.1

FGF9

fibroblast growth factor 9 (glia-activating factor)

13q11-q12

Yes

GO:0005104,GO:0008083,GO:0008201

GO:0005576,GO:0005604,GO:0005615,GO:0005737

GO:0001525,GO:0001649,GO:0002053,GO:0002062,GO:0006606,GO:0007165,GO:0007267,GO:0008284,GO:0008543,GO:0008543,GO:0008584,GO:0030178,GO:0030238,GO:0030324,GO:0030326,GO:0030949,GO:0042472,GO:0043410,GO:0045880,GO:0048505,GO:0048566,GO:0048706,GO:0050679,GO:0051781,GO:0060045

fibroblast growth factor receptor binding,growth factor activity,heparin binding

extracellular region,basement membrane,extracellular space,cytoplasm

angiogenesis,osteoblast differentiation,positive regulation of mesenchymal cell proliferation,chondrocyte differentiation,protein import into nucleus,signal transduction,cell-cell signaling,positive regulation of cell proliferation,fibroblast growth factor receptor signaling pathway,fibroblast growth factor receptor signaling pathway,male gonad development,negative regulation of Wnt receptor signaling pathway,male sex determination,lung development,embryonic limb morphogenesis,positive regulation of vascular endothelial growth factor receptor signaling pathway,inner ear morphogenesis,positive regulation of MAPKKK cascade,positive regulation of smoothened signaling pathway,regulation of timing of cell differentiation,embryonic gut development,embryonic skeletal system development,positive regulation of epithelial cell proliferation,positive regulation of cell division,positive regulation of cardiac muscle cell proliferation

ENSG00000102678

ENST00000478546,ENST00000461657

Hs.111

P31371

TGGTATAATACGTACTCATCAAACCTATATAAGCACGTGGACACTGGAAGGCGATACTAT

PH_hs_0000021

886

NM_000730.2

63054823

NP_000721.1

CCKAR

cholecystokinin A receptor

4p15.1-p15.2

Yes

GO:0004872,GO:0004930,GO:0004951

GO:0005737,GO:0005764,GO:0005768,GO:0005783,GO:0005886,GO:0005887,GO:0043195

GO:0001659,GO:0001696,GO:0001764,GO:0002023,GO:0007165,GO:0007200,GO:0007204,GO:0007409,GO:0007584,GO:0007586,GO:0007631,GO:0009314,GO:0009408,GO:0030073,GO:0030157,GO:0030900,GO:0031016,GO:0031100,GO:0031532,GO:0032496,GO:0032870,GO:0042594,GO:0043266,GO:0046883,GO:0048545,GO:0051384,GO:0051929

receptor activity,G-protein coupled receptor activity,cholecystokinin receptor activity

cytoplasm,lysosome,endosome,endoplasmic reticulum,plasma membrane,integral to plasma membrane,terminal button

temperature homeostasis,gastric acid secretion,neuron migration,reduction of food intake in response to dietary excess,signal transduction,activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger,elevation of cytosolic calcium ion concentration,axonogenesis,response to nutrient,digestion,feeding behavior,response to radiation,response to heat,insulin secretion,pancreatic juice secretion,forebrain development,pancreas development,organ regeneration,actin cytoskeleton reorganization,response to lipopolysaccharide,cellular response to hormone stimulus,response to starvation,regulation of potassium ion transport,regulation of hormone secretion,response to steroid hormone stimulus,response to glucocorticoid stimulus,positive regulation of calcium ion transport via voltage-gated calcium channel activity

ENSG00000163394

ENST00000295589

ENSP00000295589

Hs.129

P32238

TGTCCAGGTTCTCGTACAGCCATATGAGTGCCTCGGTGCCACCCCAGTGAGATGTCCCCT

PH_hs_0000022

9586

NM_182898.2

59938769

NP_878901.2

CREB5

cAMP responsive element binding protein 5

7p15.1

GO:0003700,GO:0005515,GO:0008270,GO:0043565,GO:0046872,GO:0046983

GO:0005622,GO:0005634

GO:0006366,GO:0045893

transcription factor activity,protein binding,zinc ion binding,sequence-specific DNA binding,metal ion binding,protein dimerization activity

intracellular,nucleus

transcription from RNA polymerase II promoter,positive regulation of transcription, DNA-dependent

ENSG00000146592

ENST00000396298,ENST00000396300,ENST00000396299

ENSP00000379592,ENSP00000379594,ENSP00000379593

Hs.437075

B5BUH3,Q02930

CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGC