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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 06, 2012 |
| Title |
BaSysBio Bacillus subtilis T1 385K array [070910_BaSysBio_expr] |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Bacillus subtilis subsp. subtilis str. 168 |
| Manufacturer |
NimbleGen |
| Manufacture protocol |
High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
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| |
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| Description |
AL009126.3
native array description file: 070910_BaSysBio_expr.ndf
native array description file: 070910_BaSysBio_expr.pos
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| |
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| Submission date |
Feb 10, 2011 |
| Last update date |
Apr 07, 2014 |
| Contact name |
Ulrike Mäder |
| E-mail(s) |
ulrike.maeder@uni-greifswald.de
|
| Organization name |
University Medicine Greifswald
|
| Department |
Functional Genomics
|
| Street address |
F.-L.-Jahn-Str. 15A
|
| City |
Greifswald |
| ZIP/Postal code |
D-17489 |
| Country |
Germany |
| |
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| Samples (269)
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GSM672549, GSM672550, GSM672551, GSM672552, GSM672553, GSM672554
GSM672555, GSM672556, GSM672557, GSM672558, GSM672559, GSM672560, GSM672561, GSM672562, GSM672563, GSM672564, GSM672565, GSM672566, GSM672567, GSM672568, GSM672569, GSM672570, GSM672571, GSM672572, GSM672573, GSM672574, GSM672575, GSM672576, GSM672577, GSM672578, GSM672579, GSM672580, GSM672581, GSM672582, GSM672583, GSM672584, GSM672585, GSM672586, GSM672587, GSM672588, GSM672589, GSM672590, GSM672591, GSM672592, GSM672593, GSM672594, GSM672595, GSM672596, GSM672597, GSM672598, GSM672599, GSM672600, GSM672601, GSM672602, GSM672603, GSM672604, GSM672605, GSM672606, GSM672607, GSM672608, GSM672609, GSM672610, GSM672611, GSM672612, GSM672613, GSM672614, GSM672615, GSM672616, GSM672617, GSM672618, GSM672619, GSM672620, GSM672621, GSM672622, GSM672623, GSM672624, GSM672625, GSM672626, GSM672627, GSM672628, GSM672629, GSM672630, GSM672631, GSM672632, GSM672633, GSM672634, GSM672635, GSM672636, GSM672637, GSM672638, GSM672639, GSM672640, GSM672641, GSM672642, GSM672643, GSM672644, GSM672645, GSM672646, GSM672647, GSM672648, GSM672649, GSM672650, GSM672651, GSM672652, GSM672653, GSM672654, GSM672655, GSM672656, GSM672657, GSM672658, GSM672659, GSM672660, GSM672661, GSM672662, GSM672663, GSM672664, GSM672665, GSM672666, GSM672667, GSM672668, GSM672669, GSM672670, GSM672671, GSM672672, GSM672673, GSM672674, GSM672675, GSM672676, GSM672677, GSM672678, GSM672679, GSM672680, GSM672681, GSM672682, GSM672683, GSM672684, GSM672685, GSM672686, GSM672687, GSM672688, GSM672689, GSM672690, GSM672691, GSM672692, GSM672693, GSM672694, GSM672695, GSM672696, GSM672697, GSM672698, GSM672699, GSM672700, GSM672701, GSM672702, GSM672703, GSM672704, GSM672705, GSM672706, GSM672707, GSM672708, GSM672709, GSM672710, GSM672711, GSM672712, GSM672713, GSM672714, GSM672715, GSM672716, GSM672717, GSM672718, GSM672719, GSM672720, GSM672721, GSM672722, GSM672723, GSM672724, GSM672725, GSM672726, GSM672727, GSM672728, GSM672729, GSM672730, GSM672731, GSM672732, GSM672733, GSM672734, GSM672735, GSM672736, GSM672737, GSM672738, GSM672739, GSM672740, GSM672741, GSM672742, GSM672743, GSM672744, GSM672745, GSM672746, GSM672747, GSM672748, GSM672749, GSM672750, GSM672751, GSM672752, GSM672753, GSM672754, GSM672755, GSM672756, GSM672757, GSM672758, GSM672759, GSM672760, GSM672761, GSM672762, GSM672763, GSM672764, GSM672765, GSM672766, GSM672767, GSM672768, GSM672769, GSM672770, GSM672771, GSM672772, GSM672773, GSM672774, GSM672775, GSM672776, GSM672777, GSM672778, GSM672779, GSM672780, GSM672781, GSM672782, GSM672783, GSM672784, GSM672785, GSM672786, GSM672787, GSM672788, GSM672789, GSM672790, GSM672791, GSM672792, GSM672793, GSM672794, GSM672795, GSM672796, GSM672797, GSM672798, GSM672799, GSM672800, GSM672801, GSM672802, GSM672803, GSM672804, GSM672805, GSM672806, GSM672807, GSM672808, GSM672809, GSM672810, GSM672811, GSM672812, GSM672813, GSM672814, GSM672815, GSM672816, GSM672817
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| Series (1) |
| GSE27219 |
The condition-dependent transcriptome of Bacillus subtilis 168 |
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| Data table header descriptions |
| ID |
|
| ORF |
Genbank locus_tag or an unique identifier tag for new segments |
| RANGE_GB |
AL009126.3 |
| GeneSymbol |
|
| GeneType |
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| RANGE_START |
|
| RANGE_END |
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| RANGE_STRAND |
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| Data table |
| ID |
ORF |
RANGE_GB |
GeneSymbol |
GeneType |
RANGE_START |
RANGE_END |
RANGE_STRAND |
| 1 |
|
AL009126.3 |
S1 |
5'UTR |
1 |
148 |
1 |
| 2 |
|
AL009126.3 |
S2 |
Indep-NT |
24 |
297 |
-1 |
| 3 |
|
AL009126.3 |
S3 |
5'UTR |
150 |
409 |
1 |
| 4 |
|
AL009126.3 |
S4 |
Indep |
299 |
1067 |
-1 |
| 5 |
BSU00010 |
AL009126.3 |
dnaA |
|
410 |
1750 |
1 |
| 6 |
|
AL009126.3 |
S5 |
Intra |
1751 |
1938 |
1 |
| 7 |
BSU00020 |
AL009126.3 |
dnaN |
|
1939 |
3075 |
1 |
| 8 |
BSU00030 |
AL009126.3 |
yaaA |
|
3206 |
3421 |
1 |
| 9 |
BSU00040 |
AL009126.3 |
recF |
|
3437 |
4549 |
1 |
| 10 |
BSU00050 |
AL009126.3 |
yaaB |
|
4567 |
4812 |
1 |
| 11 |
BSU00060 |
AL009126.3 |
gyrB |
|
4867 |
6783 |
1 |
| 12 |
|
AL009126.3 |
S6 |
Intra |
6784 |
6993 |
1 |
| 13 |
BSU00070 |
AL009126.3 |
gyrA |
|
6994 |
9459 |
1 |
| 14 |
|
AL009126.3 |
S7 |
5'UTR |
9529 |
9614 |
1 |
| 15 |
|
AL009126.3 |
S8 |
Inter |
14811 |
15868 |
1 |
| 16 |
BSU00080 |
AL009126.3 |
yaaC |
|
14847 |
15794 |
-1 |
| 17 |
BSU00090 |
AL009126.3 |
guaB |
|
15915 |
17381 |
1 |
| 18 |
|
AL009126.3 |
S9 |
Indep-NT |
17238 |
17833 |
-1 |
| 19 |
|
AL009126.3 |
S10 |
5'UTR |
17453 |
17533 |
1 |
| 20 |
BSU00100 |
AL009126.3 |
dacA |
|
17534 |
18865 |
1 |
Total number of rows: 5875
Table truncated, full table size 275 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL13149_070910_BaSysBio_expr.ndf.gz |
19.7 Mb |
(ftp)(http) |
NDF |
| GPL13149_070910_BaSysBio_expr.pos.gz |
5.9 Mb |
(ftp)(http) |
POS |
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