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Platform GPL11164 Query DataSets for GPL11164
Status Public on Nov 05, 2010
Title NimbleGen GDR Malus domestica EST UnigeneV4 array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Malus domestica
Manufacturer NimbleGen
Manufacture protocol High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
 
Description NimbleGen design name: 080501_GDR_Malus_EST-V4_EXP
NimbleGen design ID: 7552
 
Submission date Nov 04, 2010
Last update date Nov 05, 2010
Contact name Yanmin Zhu
E-mail yanmin.zhu@ars.usda.gov
Phone 509-664-2280
Organization name USDA ARS
Street address 1104 N. Western Ave
City Wenatchee
State/province WA
ZIP/Postal code 98801
Country USA
 
Samples (24) GSM618107, GSM618108, GSM618109, GSM618110, GSM618111, GSM618112 
Series (1)
GSE24523 Transcriptome profiling of cultivar-specific apple fruit ripening and texture attributes

Data table header descriptions
ID
GB_ACC GenBank accession
GDR_ID Genome Database for Rosaceae (GDR) identifier (http://www.rosaceae.org/)
SPOT_ID

Data table
ID GB_ACC GDR_ID SPOT_ID
Contig10000_1_f_121_1_188 Malus_v4_Contig10000 Contig10000_1_f_121_1_188
Contig10000_2_f_578_1_633 Malus_v4_Contig10000 Contig10000_2_f_578_1_633
Contig10000_4_r_526_1_562 Malus_v4_Contig10000 Contig10000_4_r_526_1_562
Contig10001_1_r_40_1_335 Malus_v4_Contig10001 Contig10001_1_r_40_1_335
Contig10001_1_r_40_2_285 Malus_v4_Contig10001 Contig10001_1_r_40_2_285
Contig10001_1_r_40_3_232 Malus_v4_Contig10001 Contig10001_1_r_40_3_232
Contig10001_1_r_40_4_177 Malus_v4_Contig10001 Contig10001_1_r_40_4_177
Contig10001_1_r_40_5_129 Malus_v4_Contig10001 Contig10001_1_r_40_5_129
Contig10001_2_r_399_1_628 Malus_v4_Contig10001 Contig10001_2_r_399_1_628
Contig10001_2_r_399_2_578 Malus_v4_Contig10001 Contig10001_2_r_399_2_578
Contig10001_2_r_399_3_530 Malus_v4_Contig10001 Contig10001_2_r_399_3_530
Contig10001_2_r_399_4_471 Malus_v4_Contig10001 Contig10001_2_r_399_4_471
Contig10001_3_f_559_1_608 Malus_v4_Contig10001 Contig10001_3_f_559_1_608
Contig10002_1_f_13_1_211 Malus_v4_Contig10002 Contig10002_1_f_13_1_211
Contig10002_1_f_13_2_161 Malus_v4_Contig10002 Contig10002_1_f_13_2_161
Contig10002_1_f_13_3_111 Malus_v4_Contig10002 Contig10002_1_f_13_3_111
Contig10002_1_f_13_4_64 Malus_v4_Contig10002 Contig10002_1_f_13_4_64
Contig10002_1_r_311_1_336 Malus_v4_Contig10002 Contig10002_1_r_311_1_336
Contig10002_2_f_384_1_538 Malus_v4_Contig10002 Contig10002_2_f_384_1_538
Contig10003_1_f_97_1_147 Malus_v4_Contig10003 Contig10003_1_f_97_1_147

Total number of rows: 190135

Table truncated, full table size 12014 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL11164_080501_GDR_Malus_EST-V4_EXP.ndf.gz 17.4 Mb (ftp)(http) NDF

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