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340 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Sus scrofa		TXT
GSE48778	In search of epigenetic marks in testes and sperm cells of differentially fed boars	Expression profiling by array Expression profiling by high throughput sequencing	Sus scrofa	12	TXT	Martin H Braunschweig	Sep 16, 2013
GSE87776	VRTN Regulates the Number of Thoracic Vertebrae During Vertebrate Development	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Sus scrofa	13	CEL TAR TXT	Yanyu Dean	Oct 09, 2019
GSE25406	Comparative analyses of transcriptome during skeletal muscle development between pig breeds differing in muscle growth rate by deep-sequencing	Expression profiling by high throughput sequencing	Sus scrofa	20	TXT SRA Run Selector	Jason Karpac	Jun 18, 2012
GSE26382	A global view of the complexity of the porcine transcriptome using a full-sib pair with extreme phenotypes in growth and fat deposit by deep RNA sequencing (mRNA)	Expression profiling by high throughput sequencing	Sus scrofa	6	TXT XML SRA Run Selector	Lusheng Huang	Jan 12, 2011
GSE26572	A global view of the complexity of the porcine transcriptome using a full-sib pair with extreme phenotypes in growth and fat deposit by deep RNA sequencing	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Sus scrofa	12	TXT	Lusheng Huang	Jan 12, 2011
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Acomys cahirinus Bos taurus Canis lupus familiaris Capra hircus Cavia porcellus Chlorocebus aethiops Equus caballus Erinaceus europaeus Felis catus Meles meles Meriones unguiculatus Mesocricetus auratus Murina leucogaster Mus musculus Oryctolagus cuniculus Peromyscus leucopus Petaurus breviceps Rattus norvegicus Suncus murinus Sus scrofa Tadarida brasiliensis Tamias sibiricus Ursus americanus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE43667	Deep Sequencing of the Porcine Endometrial Transcriptome on Day 14 of Pregnancy	Expression profiling by high throughput sequencing	Sus scrofa	8	GTF TXT SRA Run Selector	Stefan Michael Bauersachs	Mar 07, 2013
GSE43892	Transcriptome data used for gene annotation	Expression profiling by high throughput sequencing	Sus scrofa	4	TXT SRA Run Selector	Shilin Tian	Sep 19, 2013
GSE44171	RNA deep sequencing reveals novel candidate genes and polymorphisms in boar testis and liver tissues with divergent androstenone levels.	Expression profiling by high throughput sequencing	Sus scrofa	20	TXT SRA Run Selector	Sudeeep Sahadevan	Feb 09, 2013
GSE45204	Whole transcriptome analyses of three Berkshire and three Korean native pig fat, liver and muscle tissue using RNA-Seq	Expression profiling by high throughput sequencing	Sus scrofa	6	TXT SRA Run Selector	WonCheoul Park	Sep 01, 2014
GSE46755	Digital gene expression tag profiling of pig subcutaneous adipose tissue from postnatal 0 day to 7 years	Expression profiling by high throughput sequencing	Sus scrofa	12	TXT SRA Run Selector	Jie Zhang	Mar 04, 2016
GSE48862	Deep sequencing of the porcine endometrial transcriptome on day 12 of pregnancy	Expression profiling by high throughput sequencing	Sus scrofa	8	GTF TXT SRA Run Selector	Stefan Michael Bauersachs	Oct 31, 2013
GSE51282	Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets (RNA-Seq)	Expression profiling by high throughput sequencing	Sus scrofa	2	TXT SRA Run Selector	Changchun Li	Sep 03, 2014
GSE51477	Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Sus scrofa	4	TXT WIG	Changchun Li	Sep 03, 2014
GSE51968	Transcriptome sequencing of porcine hypothalamic samples	Expression profiling by high throughput sequencing	Sus scrofa	10	TXT SRA Run Selector	Dafne Pérez Montarelo	Nov 01, 2013
GSE54093	Transcriptomic analysis of Rongchang pig brains and livers	Expression profiling by high throughput sequencing	Sus scrofa	2	TXT SRA Run Selector	Ling Gan	Jul 30, 2015
GSE55674	Fed State Prior to Hemorrhagic Shock and Polytrauma in a Porcine Model Results in Altered Liver Transcriptomic Response	Expression profiling by high throughput sequencing	Sus scrofa	92	TXT SRA Run Selector	Charles Edward Determan Jr	Mar 07, 2014
GSE57509	Characterization of porcine chromosomal regions harboring QTL for water holding capacity of meta by tiling arrays and mRNA-seq	Expression profiling by high throughput sequencing	Sus scrofa	12	TXT SRA Run Selector	Klaus Wimmers	Dec 31, 2015
GSE59149	Characterization of gene expression involved in pig reproduction	Expression profiling by high throughput sequencing	Sus scrofa	4	TXT SRA Run Selector	Anu Sironen	Aug 06, 2015