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8948 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		TSV
GSE107185	SEUSS: A scalable screening platform to assess transcriptomic and fitness effects of transcription factor overexpression	Expression profiling by high throughput sequencing Other	unidentified plasmid Homo sapiens	18	CSV TSV TXT SRA Run Selector	Yan Wu	Sep 24, 2018
GSE178265	A molecular census of midbrain dopaminergic neurons in Parkinsons disease	Expression profiling by high throughput sequencing	Tupaia belangeri Rattus norvegicus Macaca mulatta Homo sapiens	101	MTX TSV SRA Run Selector	Evan Macosko	Jun 16, 2021
GSE174198	Vector-borne Trypanosoma brucei parasites develop and persist in artificial human skin as skin tissue forms	Expression profiling by high throughput sequencing	Trypanosoma brucei Homo sapiens	186	CSV H5 MTX TSV TXT SRA Run Selector	Antoine-Emmanuel Saliba	May 30, 2021
GSE229505	High-throughput identification of Toxoplasma gondii effector proteins that target host cell transcription	Expression profiling by high throughput sequencing	Toxoplasma gondii Homo sapiens	36	MTX TSV	Simon Butterworth	Jul 11, 2023
GSE118725	Systematic Analysis of Transcription Factors Binding to Noncoding Variants	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	synthetic construct Homo sapiens	11359	BW HIC NARROWPEAK TSV TXT VCF SRA Run Selector	Yunjiang Qiu	Oct 28, 2020
GSE130117	Simultaneous measurement of DNA repair activities and mRNA abundance in single cells	Expression profiling by high throughput sequencing Other	synthetic construct Homo sapiens	22	MTX TSV TXT SRA Run Selector	Jay R. Hesselberth	Oct 02, 2019
GSE134311	scRCAT-seq: simultaneously profile RNA TSS and TES at single-cell level	Expression profiling by high throughput sequencing	synthetic construct Mus musculus Homo sapiens	116	BED CSV GTF MTX TSV TXT SRA Run Selector	Jiawei Zhong	Aug 24, 2020
GSE150482	Single-cell transcriptomic profiling reveals distinct mechanical responses between normal and diseased tendon progenitor cells	Expression profiling by high throughput sequencing	synthetic construct Homo sapiens	6	CSV MTX TSV TXT SRA Run Selector	Christopher Still	Jul 07, 2021
GSE180158	Sequence determinants of human gene regulatory elements	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Homo sapiens	80	BROADPEAK NARROWPEAK TSV TXT	Teemu Kivioja	Nov 12, 2021
GSE186601	Seq-Scope analysis of human acne	Expression profiling by high throughput sequencing	synthetic construct Homo sapiens	2	MTX TSV TXT SRA Run Selector	Jun Hee Lee	Jul 22, 2022
GSE207921	Mapping of clonal lineages across developmental stages in human neural differentiation	Expression profiling by high throughput sequencing Other	synthetic construct Homo sapiens	13	MTX TSV	Zhiwen You	Jul 12, 2022
GSE217710	Functional and molecular dissection of viral lncRNAs throughout HCMV life cycle [longread]	Expression profiling by high throughput sequencing	synthetic construct Homo sapiens	6	TSV	Hyeshik Chang	Nov 16, 2022
GSE218472	Enhancer grammar of liver cell types and hepatocyte zonation states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	79	BW TSV	Carmen Bravo Gonzalez-Blas	Sep 07, 2023
GSE229586	Unbiased transcription factor CRISPR screen identifies ZNF800 as master repressor of enteroendocrine differentiation.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	synthetic construct Homo sapiens	20	BW MTX TSV TXT	Jeff DeMartino	Oct 26, 2023
GSE232455	pre-mRNA splicing order is defined and maintains splicing fidelity across multi-intronic transcripts	Expression profiling by high throughput sequencing Other	synthetic construct Homo sapiens	107	TSV TXT	Karine Choquet	May 14, 2023
GSE249247	Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation.	Other Expression profiling by high throughput sequencing	synthetic construct Homo sapiens	630	NARROWPEAK SF TSV TXT	Brian Yee	Sep 20, 2024
GSE133747	Single-cell connectomic analysis of adult mammalian lungs	Expression profiling by high throughput sequencing	Sus scrofa Rattus norvegicus Mus musculus Homo sapiens	20	MTX TSV SRA Run Selector	Micha Sam Brickman Raredon	Dec 04, 2019
GSE181483	Therapeutic landscape of targeting epigenetically reprogrammed vascular adaptome in the fibrotic liver of multiple species	Expression profiling by high throughput sequencing	Sus scrofa Homo sapiens	9	MTX TAR TSV TXT SRA Run Selector	Bi-Sen Ding	Oct 12, 2021
GSE192740	Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches (single cells)	Expression profiling by high throughput sequencing	Sus scrofa Mus musculus Mesocricetus auratus Macaca mulatta Homo sapiens Gallus gallus Danio rerio	132	H5 RDS TSV TXT SRA Run Selector	Liesbet Martens	Jan 11, 2022
GSE197106	Comparative transcriptomics reveal highly conserved regional programs between porcine and human colonic enteric nervous system	Expression profiling by high throughput sequencing	Sus scrofa Homo sapiens	54	CSV MTX TSV	Tao Li	Jan 22, 2023