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688 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		NARROWPEAK
GSE30401	AlleleSeq: Analysis of Allele-Specific Expression and Binding in a Network Framework	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BAM NARROWPEAK TAGALIGN	Joel Rozowsky	Jul 09, 2011
GSE234716	KMT2D regulates gene expression through regulating promoters/enhances upon glucose deprivation.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	29	BCF BW NARROWPEAK TXT	Cunyu Wang	Jul 05, 2024
GSE64328	Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BED CEL NARROWPEAK	Luca Petiti	Apr 04, 2016
GSE65520	Dynamic regulation of the histone variant H1.0 contributes to intratumor epigenetic and functional heterogeneity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	60	BED BROADPEAK NARROWPEAK	Paola Scaffidi	May 01, 2016
GSE67382	BAF controls genome accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	26	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Douglas Porter	Nov 12, 2015
GSE71069	Signal-Specific Genomic Regulation of NF-κB by EGFR and IL-1R	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BED BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	George Stark	Jul 01, 2020
GSE74483	BMP signaling cooperates with GATA factors to govern stage-specific gene expression during erythroid differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	49	BED NARROWPEAK WIG	Leonard Zon	Sep 14, 2020
GSE76420	LncRNA DINO guides DNA damage signaling	Expression profiling by array Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	56	BED NARROWPEAK	Adam Schmitt	Dec 30, 2015
GSE78172	DSBCapture: in situ capture and direct sequencing of dsDNA breaks	Other Expression profiling by high throughput sequencing	Homo sapiens	11	BED BEDGRAPH NARROWPEAK TDF TXT SRA Run Selector	Giovanni Marsico	Jul 18, 2016
GSE84131	CHD7 and Runx1 interaction provides a braking mechanism for hematopoietic differentiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BED CEL NARROWPEAK	Leonard Zon	Jan 01, 2023
GSE85155	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq]	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	52	BED BIGWIG NARROWPEAK SRA Run Selector	Asifa Akhtar	Mar 28, 2017
GSE85631	Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	105	BED BROADPEAK NARROWPEAK	Yen-Sin Ang	Dec 15, 2016
GSE90634	SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	78	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Cigall Kadoch	Sep 25, 2017
GSE90682	Mutations in EBF3 disturb transcriptional profiles and cause intellectual disability, ataxia and facial dysmorphism	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	16	BED NARROWPEAK TXT SRA Run Selector	Richard M Myers	Nov 30, 2016
GSE90683	Heterogeneity of neuroblastoma cell identity revealed by transcriptional circuitries	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	101	BED BW NARROWPEAK TXT SRA Run Selector	Valentina Boeva	Jul 01, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE98509	MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Other	Homo sapiens	16	BED BW CSV NARROWPEAK TXT SRA Run Selector	Alessandra Dall'Agnese	Sep 10, 2019
GSE99626	Combinatorial Reprogramming of Estrogen Signaling by the Nuclear Receptor Family 3C	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	62	BED CSV NARROWPEAK SRA Run Selector	Hari Singhal	Dec 31, 2017
GSE102807	ARID2 promotes clear cell renal cell carcinoma in the absence of functional PBRM1	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BED BW CEL NARROWPEAK SF WIG	David Aaron Schoenfeld	Aug 14, 2018
GSE104988	KDM5B links cellular transcriptome heterogeneity to therapy resistance	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	333	BED BROADPEAK BW NARROWPEAK TSV TXT	Kornelia Polyak	Oct 03, 2018