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3105 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BIGWIG
GSE73678	Canonical poly(A) polymerase activity promotes the decay of a wide variety of mammalian nuclear RNAs	Expression profiling by high throughput sequencing	Homo sapiens	10	XLSX BIGWIG SRA Run Selector	Stefan Bresson	Oct 03, 2015
GSE84897	Genome-wide analysis of DNA hydroxymethylation and methylation during epstein-barr virus infection.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8	XLSX GTF BIGWIG SRA Run Selector	Masaki Fukuyo	Apr 28, 2017
GSE89179	CHD1 regulates cell fate determination by activation of differentiation-induced genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	35	XLSX BIGWIG SRA Run Selector	Simon Joschka Baumgart	Sep 03, 2017
GSE98976	Identification of PAX7-induced transcriptional changes and PAX7 genomic binding during skeletal myogenic differentiation of H9 embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	XLSX BIGWIG BED SRA Run Selector	Alessandro Magli	Jun 30, 2017
GSE101891	JMJD3 facilitates C/EBPβ-centered transcriptional program to exert oncorepressor activity in AML	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	XLSX TXT BW BIGWIG	wang yujie	Jun 12, 2018
GSE111928	Determine genes differentially expressed between Raji cells and a subline which is resistant to APTO-253 (Raji/253R)	Expression profiling by high throughput sequencing	Homo sapiens	6	XLSX BIGWIG SRA Run Selector	Stephen B Howell	Mar 30, 2020
GSE111949	Differential expression analysis from MV4-11 cells treated with or without APTO-253 for 6 hours.	Expression profiling by high throughput sequencing	Homo sapiens	4	XLSX BIGWIG SRA Run Selector	Hongying Zhang	May 15, 2018
GSE114492	KDM5 inhibition is a novel therapeutic strategy for the treatment of KMT2D mutant lymphomas [1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	58	XLSX BIGWIG SRA Run Selector	James Heward	Jun 01, 2021
GSE137071	Post-transcriptional gene regulation by microRNA-194 promotes neuroendocrine transdifferentiation in prostate cancer	Expression profiling by high throughput sequencing	Homo sapiens	6	XLSX BIGWIG SRA Run Selector	Luke Selth	Sep 09, 2019
GSE138329	Maintenance of epithelial traits and resistance to mesenchymal reprogramming promote proliferation in metastatic breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	55	XLSX BIGWIG	Massimo Saini	Apr 30, 2023
GSE160150	Identification of novel MeCP2 cancer-associated target genes and post-translational modifications	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	XLSX BIGWIG SRA Run Selector	Kevin Pruitt	Oct 27, 2020
GSE173374	THOC5 complexes with DDX5, DDX17 and CDK12 to regulate R loop structures and transcription elongation rate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	29	XLSX CSV BIGWIG SRA Run Selector	Mareike Polenkowski	Dec 16, 2022
GSE179743	BAZ2A-RNA dependent association with TOP2A and KDM1A represses gene expression in prostate cancer	Expression profiling by high throughput sequencing	Homo sapiens	15	XLSX BIGWIG SRA Run Selector	Raffaella Santoro	Apr 14, 2023
GSE179845	Enhancer looping protein LDB1 regulates hepatocyte gene expression by cooperating with liver transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	XLSX TXT BIGWIG SRA Run Selector	GUOYOU LIU	Aug 22, 2022
GSE180706	RNA-seq analysis of sporadic and Basal Cell Nevus Syndrome-associated odontogenic keratocysts (OKCs)	Expression profiling by high throughput sequencing	Homo sapiens	18	XLSX BIGWIG SRA Run Selector	Konstantinos I Tosios	Jun 22, 2022
GSE180930	Cisplatin-induced decrease of mRNA length reveals functional and translated intronic-polyadenylation isoforms in the annotated 5’-untranslated region of genes	Expression profiling by high throughput sequencing Other	Homo sapiens	33	XLSX BIGWIG BED	Céline M. Labbé	Jul 28, 2021
GSE189893	SETD1A regulates transcriptional pause release of heme biosynthesis genes in leukemia [RNA-seq]	Expression profiling by high throughput sequencing	Homo sapiens	23	XLSX BIGWIG	Masaki Fukuyo	Dec 09, 2022
GSE190214	Complementary Alu sequences mediate enhancer-promoter selectivity	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	23	XLSX BIGWIG BED SRA Run Selector	Yuanchao Xue	May 11, 2023
GSE190724	Regulation of human germline commitment by DMRT1 [RNA-seq and Cut&Run]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	XLSX BIGWIG	SUN MIN LEE	Jul 18, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	XLSX COOL BW BIGWIG BEDGRAPH BED	Mariam Okhovat	Oct 20, 2023