GEO Browser - GEO

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3121 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BIGWIG
GSE33480	RNA-seq from ENCODE/Caltech	Expression profiling by high throughput sequencing	Homo sapiens	24	BAI BAM BIGBED BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Jul 12, 2012
GSE26284	ENCODE Cold Spring Harbor Labs Long RNA-seq	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	84	BAM BB BEDRNAELEMENTS BIGWIG GFF GTF PDF SRA Run Selector	ENCODE DCC	Dec 28, 2010
GSE27221	ENCODE Genome Institute of Singapore RNA-Seq	Expression profiling by high throughput sequencing	Homo sapiens	4	BAM BIGWIG SRA Run Selector	ENCODE DCC	Feb 14, 2011
GSE30567	ENCODE Cold Spring Harbor Labs Long RNA-seq (hg19)	Expression profiling by high throughput sequencing	Homo sapiens	99	BAM BEDRNAELEMENTS BIGWIG GFF GTF PDF TXT SRA Run Selector	ENCODE DCC	Jul 13, 2011
GSE49417	The conserved organization of the human and mouse transcriptomes	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	64	BAM BEDRNAELEMENTS BIGWIG GFF GTF PDF	ENCODE DCC	Nov 20, 2014
GSE160337	Chromatin analysis of multiple myeloma cells following CBP/p300 inhibition and degradation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	43	BB BIGWIG	Christopher Ott	Dec 31, 2020
GSE283867	Regulation of sarcomere formation and function in the healthy heart requires a titin intronic enhancer.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BB BIGWIG MTX TSV TXT	Seong Won Kim	Dec 10, 2024
GSE33600	RNA Subcellular Localization by Paired End diTag Sequencing from ENCODE/GIS	Expression profiling by high throughput sequencing	Homo sapiens	31	BED BIGWIG SRA Run Selector	ENCODE DCC	Nov 10, 2011
GSE34448	RNA Subcellular CAGE Localization from ENCODE/RIKEN	Expression profiling by high throughput sequencing	Homo sapiens	78	BED BEDRNAELEMENTS BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Dec 16, 2011
GSE53326	Genome-wide discovery of human splicing branchpoints [BPCapture]	Expression profiling by high throughput sequencing	Homo sapiens	3	BED BIGWIG SRA Run Selector	Tim R. Mercer	Oct 01, 2014
GSE54792	Epigenomic profiling of stemness, differentiation and primary tissues in human glioblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	49	BED BIGWIG BW	Esther Rheinbay	Apr 11, 2014
GSE58740	Chromatin dynamics of p53 binding sites in IMR90	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	22	BED BEDGRAPH BIGWIG TXT SRA Run Selector	Morgan Sammons	Nov 12, 2014
GSE61190	Epigenomic profiling of Non-small-cell Lung Cancer (NSCLC) cells with or without Eed	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	31	BED BIGWIG BW TXT SRA Run Selector	Gaetano Gargiulo	Jan 15, 2016
GSE66031	Identification of active transcriptional regulatory elements with GRO-seq	Expression profiling by high throughput sequencing Third-party reanalysis	Homo sapiens	2	BED BIGWIG BW TXT SRA Run Selector	Charles G Danko	Feb 19, 2015
GSE71077	Cbx8 acts non-canonically with Wdr5 to promote mammary tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BED BIGWIG	Emily Bernstein	Jun 21, 2016
GSE72141	GATA3-mediated chromatin reprogramming in breast cancer cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	80	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Jan 27, 2016
GSE74529	Transcription elongation factors are in vivo-specific cancer dependencies in glioma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BED BIGWIG TDF	Tyler E Miller	Apr 01, 2017
GSE77260	E2F1 orchestrates transcriptomics and oxidative metabolism in Wharton’s jelly derived mesenchymal stem cells from growth-restricted neonates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	60	BED BIGWIG XLS SRA Run Selector	Walter Stunkel	Jan 28, 2016
GSE78158	DUX4 recruits p300/CBP through its C-terminus and induces global H3K27 acetylation changes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BED BIGWIG CSV SRA Run Selector	Micah Gearhart	Mar 10, 2016
GSE78585	polyA mRNA RNA-seq from fibroblast of lung (ENCSR000COO)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016