GEO Browser - GEO

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131 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Homo sapiens		BW
GSE299567	IT-scC&T-seq streamlines scalable, parallel profiling of protein-DNA interactions in single cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED BROADPEAK BW H5 NARROWPEAK	Jingchun Ma	Jun 11, 2025
GSE270779	MYC couples SWI/SNF and metabolic reprogramming to sustain minimal residual disease in mTORC1-activated cancer cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	64	BROADPEAK BW NARROWPEAK VCF	Heng Du	Jun 10, 2025
GSE251920	Eradicating neuroblastomas by an RBM39 degrader in combination with anti-GD2 immunotherapy regardless of cancer cell state alterations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	18	BW NARROWPEAK RESULTS	Hongjian Jin	Jun 05, 2025
GSE244947	NOTCH1 reverses innate immune suppression in small cell lung cancer.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	87	BW	Nitin Roper	Jun 04, 2025
GSE283096	The histone acetyltransferase MOZ is a molecular dependency and therapeutic target in NUP98-rearranged acute myeloid leukemia [WGS, ATACseq, CUT&RUN, scRNAseq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	38	BED BW MTX TSV	QINGSONG GAO	Jun 02, 2025
GSE268901	Heterochromatin Protein ERH represses alternative cell fates during early mammalian differentiation [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BW	Ryan Lehman McCarthy	Jun 01, 2025
GSE226201	Gastric niche in the regulation of the epithelial cell differentiation in the human and mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	83	BW CSV MTX TSV TXT	Ye-guang Chen	May 29, 2025
GSE169102	DNA methyltransferase 1 modulates mitochondrial function through bridging m5C RNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	187	BW COV MTX TSV TXT	Guoping Fan	May 05, 2025
GSE295309	Microbial cancer immunotherapy reprograms hematopoiesis to enhance myeloid-driven anti-tumor immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	39	BW TSV	Andrew Wayne Daman	Apr 22, 2025
GSE255808	Transcriptional and epigenetic rewiring by the NUP98::KDM5A fusion oncoprotein directly activates CDK12	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BROADPEAK BW CSV NARROWPEAK	Thomas Eder	Feb 17, 2025
GSE269258	HoxBlinc lncRNA reprograms CTCF-independent TADs to drive leukemic transcription and HSC dysregulation in NUP98 fusion transformed leukemia	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	61	BED BIGWIG BW HIC MTX NARROWPEAK TABULAR TSV	Suming Huang	Jan 31, 2025
GSE287896	G-Quadruplex DNA Suppresses Transcriptional Pause Release During DNA Replication	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	80	BW MTX TSV XLSX	sun xuedan	Jan 29, 2025
GSE255182	Inhibiting CXCR4 Attenuates TOX-Programmed Exhausted Phenotype of CD8+ T cells via Regulating JAK2/STAT3 Pathway	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	48	BW CSV TSV	Canhui Cao	Jan 28, 2025
GSE250345	Functional inhibition of core spliceosomal machinery activates intronic premature cleavage and polyadenylation of pre-mRNAs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	92	BW	chengguo yao	Jan 27, 2025
GSE184757	Study of 5mC-DNA, m6A-RNA and RNA-expression in HeLa, ES and EB	Methylation profiling by genome tiling array Other Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	306	BW IDAT TSV TXT	Martin Bizet	Jan 10, 2025
GSE267491	Inhibition of DEK contributes to the tolerance of replication stress and restores HSC function in Fanconi anemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	91	BW NARROWPEAK	Zhe Chen	Jan 03, 2025
GSE268567	Single-cell parallel analysis of DNA damage and transcriptome reveals selective genome vulnerability	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BW TAR TSV	Dongsheng Bai	Jan 03, 2025
GSE276031	An epigenetic pathway regulates MHC-II expression and function in B cell lymphoma models	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	77	BW	Lu Wang	Dec 20, 2024
GSE249890	Antiandrogen treatment endows ZMYDN8 dependent epigenetic reprogramming to orchestrate neuroendocrine tumor transdifferentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	40	BW MTX TSV	Hanling Wang	Dec 19, 2024
GSE245173	APE1 regulates the transcription of urea cycle genes through stabilizing DNA G-quadruplexes in lung adenocarcinoma	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	38	BW	Yanhao Yu	Dec 06, 2024