GEO Browser - GEO

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30 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Homo sapiens		BIGWIG
GSE283867	Regulation of sarcomere formation and function in the healthy heart requires a titin intronic enhancer.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BB BIGWIG MTX TSV TXT	Seong Won Kim	Dec 10, 2024
GSE269258	HoxBlinc lncRNA reprograms CTCF-independent TADs to drive leukemic transcription and HSC dysregulation in NUP98 fusion transformed leukemia	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	61	BED BIGWIG BW HIC MTX NARROWPEAK TABULAR TSV	Suming Huang	Jan 31, 2025
GSE269226	Hoxblinc lncRNA reprograms CTCF-independent TADs to drive leukemic transcription and HSC dysregulation in NUP98 fusion transformed leukemia [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BIGWIG TABULAR	Suming Huang	Jan 31, 2025
GSE266750	GATA6 is a Novel Regulator of Gene Expression and 3D Genome in Colorectal Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	75	BED BIGWIG MCOOL TXT	Feng Yue	Dec 19, 2024
GSE253111	Tracing functional (epi)genomic imprints and their evolutionary origins in human defense antiviral cellular response (RNA-Seq 2)	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BIGWIG XLSX	Marios Agelopoulos	Feb 24, 2025
GSE248326	The catalytic domain of SETD1B regulates H3K4me3 breadth and Myc expression in MLL-r leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	53	BIGWIG	Masaki Fukuyo	Apr 28, 2025
GSE245030	CPSF6-RARγ Interacts with HDAC3 to Promote Myeloid Transformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	57	BIGWIG BW MTX TSV	meng shan	Oct 24, 2024
GSE241347	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates leukemogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	291	BED BIGWIG BROADPEAK NARROWPEAK TXT	Xiaoyang Dou	Jul 24, 2024
GSE234680	THAP1 is a master regulator of zinc finger transcription factors guiding gastrulation of murine embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	53	BIGWIG CLOUPE TAB TXT	Fubo Cheng	Aug 01, 2024
GSE233085	Chemically induced revitalization of damaged hepatocytes for regenerative liver repair	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	34	BIGWIG MTX TSV	pengyan lin	Nov 20, 2023
GSE229445	Tracing functional (epi)genomic imprints and their evolutionary origins in human defense antiviral cellular response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	156	BED BIGWIG	Marios Agelopoulos	Feb 24, 2025
GSE228805	Engrailed-1 Promotes Pancreatic Cancer Metastasis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	48	BIGWIG TXT	Chang-il Hwang	Dec 19, 2023
GSE224832	Active repression of cell fate plasticity by PROX1 safeguards hepatocyte identity and prevents liver tumorigenesis.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	104	BIGWIG TSV	Moritz Mall	Dec 18, 2024
GSE224513	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BIGWIG BROADPEAK BW MTX NARROWPEAK TSV	Christopher Russell Chin	Feb 19, 2024
GSE218588	Effect of GRPR activation on gene expression in melanoma cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	165	BED BIGWIG	Lionel Larue	Apr 21, 2025
GSE215794	KDM8 epigenetically controls cardiac metabolism to prevent initiation of dilated cardiomyopathy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	37	BIGWIG	Paul Delgado-Olguin	Dec 23, 2022
GSE207058	BORIS/CTCFL epigenetically reprograms clustered CTCF binding sites into alternative transcriptional start sites.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	BEDGRAPH BIGWIG WIG XLSX	Elena Pugacheva	Jan 03, 2024
GSE203322	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BIGWIG BW MTX RESULTS TSV TXT	Masaki Nomura	Oct 31, 2023
GSE202199	The H2A.Z.1/PWWP2A/NuRD-associated protein HMG20A controls early head and heart developmental transcription programs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	BIGWIG BW CSV	Marek Bartkuhn	Dec 12, 2022
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023