GEO Browser - GEO

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24 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing	Homo sapiens		BIGWIG
GSE202211	Aberrant EVI1 splicing contributes to EVI1-rearranged leukemia II	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BIGWIG	Masaki Nomura	Jun 21, 2022
GSE244929	Active regulatory elements recruit cohesin to establish cell-specific chromatin domains.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	44	BIGWIG BW	Emily Georgiades	Oct 13, 2023
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE138460	An androgen receptor switch underlies lineage infidelity to drive neuroendocrine prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG BW TXT	Amina Zoubeidi	Jul 15, 2021
GSE202534	Anoikis resistance drives transcriptional plasticity in pancreatic cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	74	BIGWIG	Jae Seok Roe	Apr 04, 2023
GSE100647	Che-1/AATF sustains cell growth and global transcription in Multiple Myeloma through the maintenance of open chromatin structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BIGWIG BW	Matteo Pallocca	Jun 07, 2021
GSE233085	Chemically induced revitalization of damaged hepatocytes for regenerative liver repair	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	34	BIGWIG MTX TSV	pengyan lin	Nov 20, 2023
GSE224513	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BIGWIG BROADPEAK BW MTX NARROWPEAK TSV	Christopher Russell Chin	Feb 19, 2024
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	90	BED BIGWIG	Asifa Akhtar	Mar 28, 2017
GSE99311	Enhancer reprogramming promotes pancreatic cancer progression and metastasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	136	BIGWIG TXT	Jae Seok Roe	Jul 31, 2017
GSE183876	Epigenetic basis of oncogenic-Kras mediated epithelial-cellular proliferation and plasticity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	68	BIGWIG NARROWPEAK TSV	Preetish Kadur Lakshminarasimha Murthy	Dec 22, 2021
GSE100400	Episomal HBV persistence within transcribed host nuclear chromatin compartments involves HBx	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	31	BIGWIG SRA Run Selector	Jan Postberg	Apr 30, 2018
GSE137925	Global Profiling of RNA-Binding Protein Target Sites by LACE-seq	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	55	BIGWIG BW TXT SRA Run Selector	Yuanchao Xue	Apr 25, 2021
GSE112417	Histone Variant H2A.Z Defines Cell Identity in Vascular Smooth Muscle Cells as Revealed by Single-Cell Transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG CSV TXT SRA Run Selector	Li Wang	Jun 08, 2018
GSE139420	In situ capture of global transcription dynamics and enhancer activity with high accuracy and sensitivity	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	78	BED BIGWIG XLS SRA Run Selector	Ruitu Lyu	Feb 15, 2020
GSE171599	MacroH2A histone variants modulate enhancer activity to repress oncogenic programs and cellular reprogramming	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	44	BED BIGWIG BW H5 SRA Run Selector	Alexandre Gaspar-Maia	Feb 21, 2023
GSE186614	OCA-T1 and OCA-T2 are coactivators of POU2F3 in the tuft cell lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	79	BIGWIG H5 H5AD NARROWPEAK TXT SRA Run Selector	Xiaoli Sky Wu	May 01, 2022
GSE154675	PHF6 Interacts with LMO2 During Normal Haematopoiesis and in Leukaemia and Regulates the Level of Gene Expression and Genome Integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG TXT SRA Run Selector	Maarten Hoogenkamp	Dec 31, 2024
GSE124190	PLZF limits enhancer activity during hematopoietic progenitor aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG BW TXT SRA Run Selector	Mathilde Poplineau	Dec 21, 2018
GSE163142	Retinoic Acid Signaling Drives Differentiation towards Enterocytes in Colorectal Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BIGWIG CSV TXT SRA Run Selector	Michiel Vermeulen	Nov 26, 2021