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223 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Arabidopsis thaliana		BW
GSE278188	The conserved splicing factor PRP21 regulates abscisic acid response and seed germination in Arabidopsis [PAT-Seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	8	BW	xinjian He	Apr 21, 2025
GSE278189	The conserved splicing factor PRP21 regulates abscisic acid response and seed germination in Arabidopsis [RNA-Seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	20	BW	xinjian He	Apr 21, 2025
GSE278190	The conserved splicing factor PRP21 regulates abscisic acid response and seed germination in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	36	BW	xinjian He	Apr 21, 2025
GSE269181	REM transcription factors and GDE1 shape the DNA methylation landscape through the recruitment of RNA Polymerase IV transcription complexes in Arabidopsis.	Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	124	BW NARROWPEAK	Steven E. Jacobsen	Apr 12, 2025
GSE270862	ALFIN-LIKE proteins bind H3K4me3 and recruit SWR1 to repress responsive genes [RNA-Seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	9	BW	C.Jake Harris	Apr 09, 2025
GSE275989	Angiosperm-specific subunits of histone deacetylase complexes are required for the functional specificities of the histone deacetylase HDA19 in development and stress responses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	28	BW	xinjian He	Feb 28, 2025
GSE253972	Genome-wide research of epigenetic regulation in arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Arabidopsis thaliana Oryza sativa	131	BW	Yao Yao	Feb 20, 2025
GSE271462	A core pattern-induced transcribed enhancer regulates the immune response to fungi in Arabidopsis by regulating the synthesis of camalexin	Expression profiling by high throughput sequencing	Arabidopsis thaliana	24	BW	Ying Zhang	Jan 28, 2025
GSE245958	The anti-DNA methylation mark histone H3 lysine 4 methylation recruits DNA demethylases in Arabidopsis [RNA-seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	28	BW	Zhenhui Zhong	Jan 13, 2025
GSE245961	Histone H3 lysine 4 methylation recruits DNA demethylases to enforce gene expression in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	177	BW NARROWPEAK TXT WIG	Zhenhui Zhong	Jan 13, 2025
GSE275530	Cell proliferation suppressor RBR1 interacts with ARID1 to promote pollen mitosis via stabilizing DUO1 in Arabidopsis	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	BW	Lei Li	Jan 02, 2025
GSE245273	The GTE4–EML chromatin reader complex concurrently recognizes histone acetylation and H3K4 trimethylation in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	33	BW	xinjian He	Dec 24, 2024
GSE284067	Major alleles of CDCA7α shape CG-methylation in Arabidopsis thaliana [RNA-seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	121	BW TSV	Pierre Bourguet	Dec 16, 2024
GSE281399	ALFIN-like proteins link histone H3K4me3 with H2A ubiquitination and coordinate diverse chromatin modifications in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	75	BW	xinjian He	Dec 06, 2024
GSE249738	High-throughput capture of transcription factor-driven chromatin dynamics using PHILO ChIP-seq	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Cannabis sativa Solanum lycopersicum	229	BW CSV RESULTS	Mark Zander	Dec 02, 2024
GSE247354	Substrate specificity and protein stability drive the divergence of plant-specific DNA methyltransferases	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	27	BW TXT	Xuehua Zhong	Nov 08, 2024
GSE259416	The histone acetylation module and histone chaperone in the Arabidopsis NuB4 complex have synergistic effect on chromatin accessibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	46	BW	xinjian He	Oct 25, 2024
GSE183559	Genome-wide histone 3 lysine 27 trimethylation patterns and expression analysis of WT and CLF-deficient Arabidopsis plants after high humidity treatment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	32	BW NARROWPEAK	Minhang Yuan	Sep 06, 2024
GSE274191	RNA quality control by CCR4 safeguards chromatin integrity and centromere function in Arabidopsis [RNA-seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	15	BW	ATSUSHI SHIMADA	Aug 24, 2024
GSE274200	RNA quality control by CCR4 safeguards chromatin integrity and centromere function in Arabidopsis [Oxford Nanopore Technology Direct RNA Sequencing]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	BW	ATSUSHI SHIMADA	Aug 24, 2024