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1152 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		BIGWIG
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE124197	A Genome-wide CRISPR-Based Screen Identifies KAT7 as a Senescence Driver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	71	BED BIGWIG TXT SRA Run Selector	Yuxuan Zheng	Oct 09, 2020
GSE109690	A Nucleosome Destabilizing Factor that Facilitates Transcription in Chromatin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	28	BED BIGWIG BW TXT SRA Run Selector	Jia Fei	Apr 16, 2018
GSE151901	A Polycomb domain found in committed cells impairs differentiation when introduced into PRC1 in pluripotent cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	161	BIGWIG	Robert Kingston	Oct 11, 2021
GSE46807	A TAF4 coactivator function for E proteins that involves enhanced TFIID binding	Expression profiling by high throughput sequencing	Mus musculus	8	BIGWIG TXT SRA Run Selector	Huimin Geng	Jun 06, 2013
GSE104309	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	36	BIGWIG	Yali XU	Jan 08, 2018
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE254090	A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	87	BIGWIG BW RESULTS TAR	Elizabeth C Engle	Aug 06, 2024
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE159648	A coregulator shift, rather than the canonical switch, underlies thyroid hormone action in liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BIGWIG TSV TXT SRA Run Selector	Mitchell Lazar	Jan 01, 2021
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	BAM BIGWIG BOWTIE TXT	Bing Ren	Jul 01, 2012
GSE29278	A draft map of cis-regulatory sequences in the mouse genome [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	19	BAM BIGWIG SRA Run Selector	Bing Ren	Jul 01, 2012
GSE85178	A general transcription co-factor, Smad3, potentiates master transcription factor mediated cell identity conversions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	105	BIGWIG	Keisuke Kaji	Nov 02, 2017
GSE154582	A genome-wide exploration of the targets of the transcription factors FOXL2 and ESR2 unveils their implication in cell migration, invasion and adhesion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BIGWIG TXT	Anne Laure Todeschini	Mar 24, 2021
GSE143711	A hotspot mutation p.L162R in IKZF3 drives leukemogenesis via transcriptional dysregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG BW TXT SRA Run Selector	Catherine Wu	Dec 01, 2020
GSE88745	A hyperdynamic H3.3 nucleosome marks promoter regions in pluripotent embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BIGWIG FPKM_TRACKING SRA Run Selector	Tommy Kaplan	Sep 05, 2017
GSE148316	A latent lineage potential in resident neural stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BIGWIG CSV MTX TSV SRA Run Selector	Enric Llorens Bobadilla	Aug 31, 2020
GSE90574	A lncRNA fine tunes the dynamics of a cell state transition involving Lin28, let-7 and de novo DNA methylation	Expression profiling by high throughput sequencing Other	Mus musculus	19	BED BIGWIG TXT SRA Run Selector	Samuel Robson	Aug 09, 2017
GSE198651	A lncRNA identifies Irf8 enhancer element in negative feedback control of dendritic cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BIGWIG TDF	Zhijian Li	Mar 01, 2023