GEO Browser - GEO

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61 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing	Mus musculus		WIG
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE227893	A monoclonal antibody raised against human EZH2 cross-reacts with the RNA-binding protein SAFB	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED WIG	Joseph Mauro Calabrese	May 29, 2023
GSE227892	A monoclonal antibody raised against human EZH2 cross-reacts with the RNA-binding protein SAFB [RIP-seq]	Expression profiling by high throughput sequencing	Mus musculus	7	BED TXT WIG	Joseph Mauro Calabrese	May 29, 2023
GSE117732	A novel role for the conserved, orphan deaminase APOBEC2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT WIG	Nina Papavasiliou	Jul 26, 2021
GSE166179	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	1185	CSV H5 SF WIG	Eneritz Agirre	May 21, 2021
GSE101292	Allele-specific expression profiling of imprinted genes in mouse isogenic pluripotent tissues and cell lines	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	WIG SRA Run Selector	Hendrik Marks	Feb 16, 2019
GSE129067	An enhancer cluster controls gene activity and topology of the SCN5A-SCN10A locus in vivo	Expression profiling by high throughput sequencing Other	Mus musculus	24	WIG	Vincent M. Christoffels	Oct 04, 2019
GSE139117	Analysis of CRE-mediated chromatin interactions by CAPTURE2.0	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	105	BED BW WIG	Jian Xu	Feb 20, 2020
GSE84899	Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV WIG SRA Run Selector	Jacqueline Deschamps	Dec 20, 2016
GSE200586	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	174	BW WIG	Luke Thomas Isbel	Apr 29, 2023
GSE129707	Dinucleotide regulation by REXO2 maintains promoter specificity in mammalian mitochondria	Expression profiling by high throughput sequencing Other	Mus musculus	12	TXT WIG SRA Run Selector	Stefan J Siira	Oct 03, 2019
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE74547	ETO Family Protein Mtgr1 Mediates Prdm14 Functions in Stem Cell Maintenance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	TXT WIG SRA Run Selector	Natalie Nady	Jan 01, 2016
GSE89418	EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BED TXT WIG	Melissa Kinney	Jan 01, 2018
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE155972	Epigenetic Silencing by SETDB1 Suppresses Tumor-cell Intrinsic Immunogenicity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	177	CSV H5 TXT WIG SRA Run Selector	Jingyi Wu	Mar 18, 2021
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE184470	Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	98	WIG	Dirk Schuebeler	Sep 29, 2022
GSE196106	Functional analysis of Vsx2 super-enhancer reveals an autoregulatory network governing Vsx2 expression during retinogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	26	TAB WIG	Shuchang Liu	Jul 13, 2022
GSE187007	G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus Saccharomyces cerevisiae	63	BED WIG SRA Run Selector	Amal Makrini	Apr 14, 2023