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144 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			VCF
GSE50990	Intronic Non-CG DNA Hydroxymethylation and Alternative mRNA Splicing in Honey Bees	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Apis mellifera Apis mellifera scutellata	8	BED TXT VCF SRA Run Selector	Pablo Cingolani	Sep 19, 2013
GSE52194	mRNA-sequencing of breast cancer subtypes and normal tissue	Expression profiling by high throughput sequencing	Homo sapiens	20	GTF VCF SRA Run Selector	Anelia Horvath	Nov 08, 2013
GSE58390	Pseudomonas aeruginosa Ceftolozane-Tazobactam Resistance Development Requires Multiple Mutations Leading to Overexpression and Structural Modification of AmpC.	Expression profiling by high throughput sequencing	Pseudomonas aeruginosa PAO1	16	TXT VCF SRA Run Selector	Denitsa Eckweiler	Jun 12, 2014
GSE68925	RNAi profiling of primary human AML cells identifies ROCK1 as a therapeutic target and nominates Fasudil as an anti-leukemic drug.	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Homo sapiens	10	TXT VCF SRA Run Selector	Maciej Paszkowski-Rogacz	May 16, 2015
GSE68559	RNA sequencing of transcriptomes in human brain regions: protein-coding and non-coding RNAs, isoforms and alleles	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	98	TXT VCF SRA Run Selector	Amy Hite	Sep 01, 2015
GSE73291	Muscle transcriptome analysis of the large yellow croaker under fasting treatment by RNA-seq	Expression profiling by high throughput sequencing Other	Larimichthys crocea	2	TXT VCF SRA Run Selector	Baoying Qian	Sep 22, 2015
GSE69013	Active chromatin and transcription play a key role in chromosome partitioning into topologiсally associating domains	Expression profiling by high throughput sequencing Other	Drosophila melanogaster	20	TXT VCF SRA Run Selector	Ekaterina Khrameeva	Oct 26, 2015
GSE77389	Global assessment of imprinted gene expression in the bovine conceptus by next generation sequencing	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Bos indicus Bos indicus x Bos taurus	5	VCF XLSX SRA Run Selector	Rocío Melissa Rivera	Aug 17, 2016
GSE84430	A germline mutation of CDKN2A and a novel RPLP1-C19MC fusion detected in a rare melanotic neuroectodermal tumor of infancy: a case report [Seq]	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	3	TXT VCF SRA Run Selector	Bass Hassan	Aug 29, 2016
GSE84431	A germline mutation of CDKN2A and a novel RPLP1-C19MC fusion detected in a rare melanotic neuroectodermal tumor of infancy: a case report	Genome variation profiling by genome tiling array Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	5	TXT VCF	Bass Hassan	Aug 29, 2016
GSE83237	Identification of avirulence genes in the barley powdery mildew fungus (Bgh) by RNA-sequencing and transcriptome-wide association analysis on a set of Bgh isolates	Expression profiling by high throughput sequencing	Blumeria hordei	32	TXT VCF SRA Run Selector	Barbara Kracher	Oct 05, 2016
GSE85554	Characterization of genetic loss-of-function of Fus in zebrafish	Expression profiling by high throughput sequencing	Danio rerio	9	TXT VCF SRA Run Selector	René Ketting	Dec 01, 2016
GSE74470	Transcriptomic Insights into Genetic Diversity of Protein-Coding Genes in X. laevis	Expression profiling by high throughput sequencing	Xenopus laevis	3	TSV TXT VCF SRA Run Selector	Leonid Peshkin	Mar 15, 2017
GSE92966	The role of Lgr5 intestinal cancer stem cells in tumour initiation, progression and metastasis	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Mus musculus	48	TSV TXT VCF	Robert Piskol	Mar 29, 2017
GSE97577	Epigenetic and genetic dissections of UV-induced global gene dysregulation in skin cells through multi-omics analyses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	9	BW CSV VCF SRA Run Selector	Liang Liu	Apr 11, 2017
GSE102191	RNA sequencing of Hordeum vulgare near-isogenic lines	Expression profiling by high throughput sequencing	Hordeum vulgare	32	VCF XLSX SRA Run Selector	Kurt Stueber	Aug 03, 2017
GSE84073	Patient-derived organoid cultures model human primary liver cancer in vitro	Expression profiling by high throughput sequencing Other	Homo sapiens	59	TXT VCF SRA Run Selector	Charles Richard Bradshaw	Nov 13, 2017
GSE107602	BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Allelic Gene Expression in Anolis carolinensis, bulk tissue RNA-seq)	Expression profiling by high throughput sequencing Other	Anolis carolinensis	15	VCF	Diego Cortez	Dec 04, 2017
GSE110538	Active BRAF-V600E is the key player in generation of a sessile serrated polyp-specific DNA methylation profile	Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	28	VCF	David A Jones	Apr 09, 2018
GSE99852	Physiologic expression of Srsf2(P95H) causes myeloid expansion, impaired competitive stem cell function and initiates the myeloproliferative/myelodysplastic syndrome in vivo.	Expression profiling by high throughput sequencing Other	Mus musculus	14	TXT VCF	Alistair Morgan Chalk	Jun 18, 2018