GEO Browser - GEO

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26 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			TXT	Christopher Benner
GSE23619	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes (Illumina sequencing data)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BED FA TXT SRA Run Selector	Christopher Benner	Jan 01, 2011
GSE23622	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	55	BED FA TXT	Christopher Benner	Jan 01, 2011
GSE40173	Global changes in the nuclear positioning of chromatin domains and genomic interactions that orchestrate B cell fate	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED BEDGRAPH TXT SRA Run Selector	Christopher Benner	Oct 09, 2012
GSE47626	Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Pan paniscus Pan troglodytes	18	TXT SRA Run Selector	Christopher Benner	Oct 23, 2013
GSE54443	Mutant Huntingtin promotes neuronal death through cell autonomous microglial activation via myeloid lineage- determining factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BED TXT SRA Run Selector	Christopher Benner	Mar 02, 2014
GSE54968	Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Christopher Benner	May 15, 2015
GSE57272	Conserved non-coding sequence 2 (CNS2) of the Foxp3 genomic locus is essential for the function and stability of regulatory T cells during their activation	Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Christopher Benner	Sep 04, 2014
GSE60603	An alternative pluripotent state confers interspecies chimaeric competency [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	14	TXT SRA Run Selector	Christopher Benner	May 06, 2015
GSE60857	Coordinate Regulation of Enhancer Transcription at Super-Enhancers	Expression profiling by high throughput sequencing Other	Mus musculus	8	TXT SRA Run Selector	Christopher Benner	Dec 25, 2014
GSE62387	In vivo activation of a conserved microRNA program induces robust mammalian heart regeneration (RNA-Seq)	Expression profiling by high throughput sequencing	Rattus norvegicus	2	TXT SRA Run Selector	Christopher Benner	Nov 20, 2014
GSE64008	Nucleoporin Nup153 Regulates Stem Cell Pluripotency through Gene Silencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED TXT SRA Run Selector	Christopher Benner	Jun 19, 2015
GSE64108	Transcriptomic changes in Drosophila tissues under Time-restricted Feeding (TRF)	Expression profiling by high throughput sequencing	Drosophila melanogaster	72	TXT SRA Run Selector	Christopher Benner	Feb 18, 2015
GSE66457	Mutational blows to Sox2+ cells induce epithelial squamous tumor initiation	Expression profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Christopher Benner	Jan 01, 2017
GSE68645	The DAXX co-repressor is directly recruited to active regulatory elements genome-wide to regulate autophagy programs in a model of human prostate cancer (RNA-seq)	Expression profiling by high throughput sequencing	Homo sapiens	4	TXT SRA Run Selector	Christopher Benner	Jun 24, 2015
GSE69932	Comparison of the transcriptome and chromatin state between human cord blood HSC and human iPSC derived hematopoietic progenitor using next-generation sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BED TXT SRA Run Selector	Christopher Benner	Jan 01, 2019
GSE77129	Wiskott-Aldrich Syndrome-causative mutations disrupt alternative splicing and promote gene networks predisposed to hematologic malignancies	Expression profiling by high throughput sequencing	Homo sapiens	5	TXT SRA Run Selector	Christopher Benner	Jan 01, 2019
GSE83108	Nascent RNA sequencing reveals distinct features in Plant transcription	Expression profiling by high throughput sequencing	Arabidopsis thaliana	5	TXT SRA Run Selector	Christopher Benner	Oct 06, 2016
GSE87831	Nucleoporin-mediated regulation of cell identity genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	33	BED TXT SRA Run Selector	Christopher Benner	Nov 15, 2016
GSE103477	Transcription elongation regulates genome 3D structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	253	BED BEDGRAPH HIC TXT SRA Run Selector	Christopher Benner	Aug 23, 2018
GSE143780	Shear Stresses Associated with Cardiopulmonary Bypass Activate Expression Inflammatory Cytokines and Induce Necroptosis in Monocytes Via Calcium Dependent Signaling	Expression profiling by high throughput sequencing	Homo sapiens	35	TXT SRA Run Selector	Christopher Benner	Dec 06, 2020