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1545 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			TAB
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE21180	Characterization of the single-cell transcriptional landscape by highly multiplex RNA-Seq	Expression profiling by high throughput sequencing	Mus musculus	5	TAB TXT WIG SRA Run Selector	Sten Linnarsson	Sep 21, 2010
GSE22393	Genome-wide Measurement of RNA Secondary Structure in Yeast	Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	7	FASTA TAB WIG SRA Run Selector	Michael Kertesz	Aug 24, 2010
GSE28864	A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins (mRNA-seq)	Expression profiling by high throughput sequencing	Homo sapiens	10	TAB SRA Run Selector	Jean Hausser	May 15, 2011
GSE28865	A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins	Expression profiling by high throughput sequencing	Homo sapiens	23	FA TAB	Jean Hausser	May 15, 2011
GSE33222	Heat stress effects on gene expression in the grape berry. Comparison of pre- and post-véraison berries and microarray versus mRNA-seq datasets.	Expression profiling by high throughput sequencing	Vitis vinifera	8	BAM TAB SRA Run Selector	Mark Raymond Thomas	Nov 22, 2018
GSE33386	Unique mRNA expressed during grapevine floral development	Expression profiling by high throughput sequencing	Vitis vinifera	11	BAM TAB SRA Run Selector	Mark Raymond Thomas	Nov 22, 2018
GSE35857	Essential role of EBF1 in B cell immunity by controlling the generation and function of distinct mature B cell types	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	29	BED TAB SRA Run Selector	Meinrad Busslinger	Mar 20, 2012
GSE36626	Dynamic Deposition of the Histone H3.3 Variant Accompanies Developmental Remodeling of Arabidopsis Transcriptome (mRNA-Seq)	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	TAB SRA Run Selector	Pierre-Étienne Jacques	May 16, 2012
GSE36631	Dynamic Deposition of the Histone H3.3 Variant Accompanies Developmental Remodeling of Arabidopsis Transcriptome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	20	TAB WIG	Pierre-Étienne Jacques	May 16, 2012
GSE38148	The RNA Pol II Elongation Factor Ell3 Marks Enhancers in ES Cells and Primes Future Gene Activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED TAB SRA Run Selector	Alexander (Garrett) Garruss	Dec 30, 2012
GSE38755	miRNA regulation in the early development of barley seed	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Hordeum vulgare	6	TAB TXT SRA Run Selector	Jennifer Taylor	Jun 16, 2012
GSE38771	Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	13	BEDGRAPH CALLS PAIR TAB	Peter J Park	Jul 16, 2012
GSE39970	Transcriptomic sequencing of the murine testis during the first wave of spermatogenesis	Expression profiling by high throughput sequencing	Mus musculus	12	TAB SRA Run Selector	Anu Sironen	Apr 29, 2013
GSE41437	The viral and cellular microRNA targetome in lymphoblastoid cell lines	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	11	BED TAB SRA Run Selector	Rebecca L Skalsky	Oct 16, 2012
GSE41876	Transcriptome profiling at neural tube closure site	Expression profiling by high throughput sequencing	Mus musculus	8	TAB SRA Run Selector	J. Michael Salbaum	Oct 24, 2016
GSE42608	Whole-transcriptome high-throughput RNA sequencing of blood leukocytes from Parkinson's disease human patients pre- and post-deep brain stimulation	Expression profiling by high throughput sequencing	Homo sapiens	13	BED GFF3 TAB TXT SRA Run Selector	Lilach Soreq	Jul 16, 2014
GSE42629	Density and methylation state of CpG dinucleotides define histone variant specific retention of nucleosomes in mouse spermatozoa	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	21	TAB WIG SRA Run Selector	Antoine Peters	Jun 15, 2013
GSE44718	Multiple roles for Grainyheadlike transcription factors in the establishment and maintenance of human mucociliary airway epithelium	Expression profiling by high throughput sequencing	Homo sapiens	8	TAB SRA Run Selector	Timothy E Reddy	May 07, 2013
GSE45157	Trans-chromosomal regulation by a novel lincRNA required for adipogenesis that escapes X-chromosome inactivation	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	21	TAB TXT SRA Run Selector	Loyal A Goff	Jun 01, 2013